RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 CACNB2Q08289 660 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-212ENST00000430617 GRIN2CQ14957 1233 aa12.57□□□□□ -0.4
ATG4B-212ENST00000430617 EPHA10Q5JZY3 1008 aa12.57□□□□□ -0.4
ATG4B-212ENST00000430617 C20orf194Q5TEA3 1177 aa12.57□□□□□ -0.4
ATG4B-212ENST00000430617 HHIPL2Q6UWX4 724 aa12.57□□□□□ -0.4
ATG4B-212ENST00000430617 FBXO33Q7Z6M2 555 aa12.57□□□□□ -0.4
ATG4B-212ENST00000430617 ADAMTS19Q8TE59 1207 aa12.57□□□□□ -0.4
ATG4B-212ENST00000430617 SENP6Q9GZR1 1112 aaPredicted RBP12.57□□□□□ -0.4
ATG4B-212ENST00000430617 FAM198AQ9UFP1 575 aa12.57□□□□□ -0.4
ATG4B-212ENST00000430617 AGTPBP1Q9UPW5 1226 aa12.57□□□□□ -0.4
ATG4B-212ENST00000430617 CHD9Q3L8U1 2897 aa12.56□□□□□ -0.4
ATG4B-212ENST00000430617 PIEZO1Q92508 2521 aa12.56□□□□□ -0.4
ATG4B-212ENST00000430617 PEX10O60683 326 aa12.56□□□□□ -0.4
ATG4B-212ENST00000430617 ATN1P54259 1190 aaPredicted RBP12.56□□□□□ -0.4
ATG4B-212ENST00000430617 CDC42EP5Q6NZY7 148 aa12.56□□□□□ -0.4
ATG4B-212ENST00000430617 LMBR1LQ6UX01 489 aa12.56□□□□□ -0.4
ATG4B-212ENST00000430617 TBC1D22AQ8WUA7 517 aa12.56□□□□□ -0.4
ATG4B-212ENST00000430617 PUS3Q9BZE2 481 aaKnown RBP12.56□□□□□ -0.4
ATG4B-212ENST00000430617 PICK1Q9NRD5 415 aa12.56□□□□□ -0.4
ATG4B-212ENST00000430617 MUC6Q6W4X9 2439 aa12.56□□□□□ -0.4
ATG4B-212ENST00000430617 SMCHD1A6NHR9 2005 aa12.55□□□□□ -0.4
ATG4B-212ENST00000430617 CDK5RAP2Q96SN8 1893 aa12.55□□□□□ -0.4
ATG4B-212ENST00000430617 TRIM27P14373 513 aa12.55□□□□□ -0.4
ATG4B-212ENST00000430617 ASB2Q96Q27 587 aa12.55□□□□□ -0.4
ATG4B-212ENST00000430617 TNNQ9UQP3 1299 aa12.55□□□□□ -0.4
ATG4B-212ENST00000430617 RTP1P59025 263 aa12.54□□□□□ -0.4
ATG4B-212ENST00000430617 PDE3AQ14432 1141 aa12.54□□□□□ -0.4
ATG4B-212ENST00000430617 CCL14Q16627 93 aa12.54□□□□□ -0.4
ATG4B-212ENST00000430617 CCDC57Q2TAC2 916 aa12.54□□□□□ -0.4
ATG4B-212ENST00000430617 ZKSCAN2Q63HK3 967 aa12.54□□□□□ -0.4
ATG4B-212ENST00000430617 ATF7IPQ6VMQ6 1270 aa12.54□□□□□ -0.4
ATG4B-212ENST00000430617 PPM1EQ8WY54 764 aa12.54□□□□□ -0.4
ATG4B-212ENST00000430617 BADQ92934 168 aa12.54□□□□□ -0.4
ATG4B-212ENST00000430617 UHRF1Q96T88 793 aaPredicted RBP12.54□□□□□ -0.4
ATG4B-212ENST00000430617 DAGLAQ9Y4D2 1042 aa12.54□□□□□ -0.4
ATG4B-212ENST00000430617 CHD7Q9P2D1 2997 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 FRAT2O75474 233 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-212ENST00000430617 RLBP1P12271 317 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 GCLCP48506 637 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-212ENST00000430617 DIXDC1Q155Q3 683 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 TAF7LQ5H9L4 462 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 ERICH6BQ5W0A0 696 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 SH3BP5LQ7L8J4 393 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 VPS37DQ86XT2 251 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 LINS1Q8NG48 757 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 ATXN2LQ8WWM7 1075 aaKnown RBP12.53□□□□□ -0.4
ATG4B-212ENST00000430617 ARHGAP45Q92619 1136 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 FRAT1Q92837 279 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-212ENST00000430617 NECAB3Q96P71 396 aaPredicted RBP12.53□□□□□ -0.4
ATG4B-212ENST00000430617 PRKAG2Q9UGJ0 569 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 PNMA3Q9UL41 463 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 NOB1Q9ULX3 412 aaKnown RBP12.53□□□□□ -0.4
ATG4B-212ENST00000430617 MAST3O60307 1309 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 PTPRCP08575 1304 aa12.53□□□□□ -0.4
ATG4B-212ENST00000430617 XRCC5P13010 732 aaKnown RBP12.52□□□□□ -0.41
ATG4B-212ENST00000430617 DNAAF4Q8WXU2 420 aa12.52□□□□□ -0.41
ATG4B-212ENST00000430617 CRBNQ96SW2 442 aa12.52□□□□□ -0.41
ATG4B-212ENST00000430617 ASCC2Q9H1I8 757 aaPredicted RBP12.52□□□□□ -0.41
ATG4B-212ENST00000430617 ATP11BQ9Y2G3 1177 aa12.52□□□□□ -0.41
ATG4B-212ENST00000430617 SIPA1L1O43166 1804 aa12.52□□□□□ -0.41
ATG4B-212ENST00000430617 ZNFX1Q9P2E3 1918 aaKnown RBP12.52□□□□□ -0.41
ATG4B-212ENST00000430617 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
ATG4B-212ENST00000430617 ZKSCAN1P17029 563 aaPredicted RBP12.51□□□□□ -0.41
ATG4B-212ENST00000430617 POTEEQ6S8J3 1075 aa12.51□□□□□ -0.41
ATG4B-212ENST00000430617 SH3RF1Q7Z6J0 888 aa12.51□□□□□ -0.41
ATG4B-212ENST00000430617 PANK1Q8TE04 598 aa12.51□□□□□ -0.41
ATG4B-212ENST00000430617 USP6NLQ92738 828 aa12.51□□□□□ -0.41
ATG4B-212ENST00000430617 NUDT12Q9BQG2 462 aa12.51□□□□□ -0.41
ATG4B-212ENST00000430617 STK31Q9BXU1 1019 aa12.51□□□□□ -0.41
ATG4B-212ENST00000430617 CHMP4AQ9BY43 222 aa12.51□□□□□ -0.41
ATG4B-212ENST00000430617 MORF4L1Q9UBU8 362 aa12.51□□□□□ -0.41
ATG4B-212ENST00000430617 SUGT1Q9Y2Z0 365 aa12.51□□□□□ -0.41
ATG4B-212ENST00000430617 IPO8O15397 1037 aaKnown RBP12.5□□□□□ -0.41
ATG4B-212ENST00000430617 CTNND1O60716 968 aaKnown RBP12.5□□□□□ -0.41
ATG4B-212ENST00000430617 EPHB4P54760 987 aa12.5□□□□□ -0.41
ATG4B-212ENST00000430617 MAP3K10Q02779 954 aa12.5□□□□□ -0.41
ATG4B-212ENST00000430617 FLIIQ13045 1269 aa12.5□□□□□ -0.41
ATG4B-212ENST00000430617 PROCA1Q8NCQ7 364 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-212ENST00000430617 EXOC6Q8TAG9 804 aa12.5□□□□□ -0.41
ATG4B-212ENST00000430617 LRFN3Q9BTN0 628 aa12.5□□□□□ -0.41
ATG4B-212ENST00000430617 C1QTNF1Q9BXJ1 281 aa12.5□□□□□ -0.41
ATG4B-212ENST00000430617 API5Q9BZZ5 524 aaKnown RBP12.5□□□□□ -0.41
ATG4B-212ENST00000430617 TXNRD2Q9NNW7 524 aa12.5□□□□□ -0.41
ATG4B-212ENST00000430617 PRDM5Q9NQX1 630 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-212ENST00000430617 USP40Q9NVE5 1235 aa12.5□□□□□ -0.41
ATG4B-212ENST00000430617 THEGQ9P2T0 379 aa12.5□□□□□ -0.41
ATG4B-212ENST00000430617 ARIH1Q9Y4X5 557 aaPredicted RBP12.5□□□□□ -0.41
ATG4B-212ENST00000430617 LRRFIP2Q9Y608 721 aaKnown RBP12.5□□□□□ -0.41
ATG4B-212ENST00000430617 TRIM43BA6NCK2 446 aa12.49□□□□□ -0.41
ATG4B-212ENST00000430617 DDTLA6NHG4 134 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-212ENST00000430617 ITGB8P26012 769 aa12.49□□□□□ -0.41
ATG4B-212ENST00000430617 RGS3P49796 1198 aa12.49□□□□□ -0.41
ATG4B-212ENST00000430617 HMGCS2P54868 508 aa12.49□□□□□ -0.41
ATG4B-212ENST00000430617 MRPS5P82675 430 aaKnown RBP12.49□□□□□ -0.41
ATG4B-212ENST00000430617 SPP2Q13103 211 aa12.49□□□□□ -0.41
ATG4B-212ENST00000430617 CAVIN4Q5BKX8 364 aa12.49□□□□□ -0.41
ATG4B-212ENST00000430617 TRIM43Q96BQ3 446 aaPredicted RBP12.49□□□□□ -0.41
ATG4B-212ENST00000430617 SNX27Q96L92 541 aa12.49□□□□□ -0.41
ATG4B-212ENST00000430617 ZNF576Q9H609 170 aa12.49□□□□□ -0.41
ATG4B-212ENST00000430617 WDFY4Q6ZS81 3184 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms