RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 GPAT2Q6NUI2 795 aa20.65■□□□□ 0.9
UBE3D-204ENST00000430071 ERO1AQ96HE7 468 aa20.65■□□□□ 0.9
UBE3D-204ENST00000430071 ARHGAP39Q9C0H5 1083 aa20.65■□□□□ 0.9
UBE3D-204ENST00000430071 DCTPP1Q9H773 170 aa20.65■□□□□ 0.9
UBE3D-204ENST00000430071 BAZ2AQ9UIF9 1905 aaKnown RBP20.65■□□□□ 0.9
UBE3D-204ENST00000430071 HDAC1Q13547 482 aaPredicted RBP20.64■□□□□ 0.89
UBE3D-204ENST00000430071 SLC4A8Q2Y0W8 1093 aa20.64■□□□□ 0.89
UBE3D-204ENST00000430071 MIGA1Q8NAN2 632 aa20.64■□□□□ 0.89
UBE3D-204ENST00000430071 EDC3Q96F86 508 aaKnown RBP20.64■□□□□ 0.89
UBE3D-204ENST00000430071 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.64■□□□□ 0.89
UBE3D-204ENST00000430071 AFG3L2Q9Y4W6 797 aa20.64■□□□□ 0.89
UBE3D-204ENST00000430071 COL2A1P02458 1487 aaPredicted RBP20.64■□□□□ 0.89
UBE3D-204ENST00000430071 PDHXO00330 501 aa20.63■□□□□ 0.89
UBE3D-204ENST00000430071 TBC1D12O60347 775 aa20.63■□□□□ 0.89
UBE3D-204ENST00000430071 TLR2O60603 784 aa20.63■□□□□ 0.89
UBE3D-204ENST00000430071 SHROOM1Q2M3G4 852 aaPredicted RBP20.63■□□□□ 0.89
UBE3D-204ENST00000430071 MAGEB6Q8N7X4 407 aa20.63■□□□□ 0.89
UBE3D-204ENST00000430071 KIF1BPQ96EK5 621 aa20.63■□□□□ 0.89
UBE3D-204ENST00000430071 NAV1Q8NEY1 1877 aa20.63■□□□□ 0.89
UBE3D-204ENST00000430071 CTNND1O60716 968 aaKnown RBP20.62■□□□□ 0.89
UBE3D-204ENST00000430071 MAP4K4O95819 1239 aaPredicted RBP20.62■□□□□ 0.89
UBE3D-204ENST00000430071 IGHDP01880 384 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 CTGFP29279 349 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 JAG1P78504 1218 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 ANKRD23Q86SG2 305 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 NOL10Q9BSC4 688 aaKnown RBP20.62■□□□□ 0.89
UBE3D-204ENST00000430071 DNAJC18Q9H819 358 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 EFCC1Q9HA90 598 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 PICK1Q9NRD5 415 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 SAP30BPQ9UHR5 308 aaKnown RBP20.62■□□□□ 0.89
UBE3D-204ENST00000430071 CPA4Q9UI42 421 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 PALD1Q9ULE6 856 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 PTPN22Q9Y2R2 807 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 LOC285556D6RIA3 1793 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 FLT1P17948 1338 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 ADGRA2Q96PE1 1338 aa20.62■□□□□ 0.89
UBE3D-204ENST00000430071 CXCL11O14625 94 aa20.61■□□□□ 0.89
UBE3D-204ENST00000430071 SMARCA5O60264 1052 aaPredicted RBP20.61■□□□□ 0.89
UBE3D-204ENST00000430071 RAB11FIP3O75154 756 aa20.61■□□□□ 0.89
UBE3D-204ENST00000430071 BAG3O95817 575 aa20.61■□□□□ 0.89
UBE3D-204ENST00000430071 MLLT1Q03111 559 aaPredicted RBP20.61■□□□□ 0.89
UBE3D-204ENST00000430071 A0A0G2JLL6 359 aaPredicted RBP20.6■□□□□ 0.89
UBE3D-204ENST00000430071 NEFLP07196 543 aa20.6■□□□□ 0.89
UBE3D-204ENST00000430071 CYP2C8P10632 490 aa20.6■□□□□ 0.89
UBE3D-204ENST00000430071 SLFNL1Q499Z3 407 aa20.6■□□□□ 0.89
UBE3D-204ENST00000430071 C17orf99Q6UX52 265 aa20.6■□□□□ 0.89
UBE3D-204ENST00000430071 PRRT2Q7Z6L0 340 aaPredicted RBP20.6■□□□□ 0.89
UBE3D-204ENST00000430071 CLASRPQ8N2M8 674 aaKnown RBP20.6■□□□□ 0.89
UBE3D-204ENST00000430071 ZCCHC17Q9NP64 241 aaKnown RBP20.6■□□□□ 0.89
UBE3D-204ENST00000430071 DDX60LQ5H9U9 1706 aaKnown RBP20.6■□□□□ 0.89
UBE3D-204ENST00000430071 MYH8P13535 1937 aa20.6■□□□□ 0.89
UBE3D-204ENST00000430071 RBBP6Q7Z6E9 1792 aaKnown RBP20.59■□□□□ 0.89
UBE3D-204ENST00000430071 TRIM75PA6NK02 468 aa20.59■□□□□ 0.89
UBE3D-204ENST00000430071 GADL1Q6ZQY3 521 aa20.59■□□□□ 0.89
UBE3D-204ENST00000430071 RWDD1Q9H446 243 aaPredicted RBP20.59■□□□□ 0.89
UBE3D-204ENST00000430071 BRCA2P51587 3418 aa20.59■□□□□ 0.89
UBE3D-204ENST00000430071 IFIT2P09913 472 aaKnown RBP20.59■□□□□ 0.89
UBE3D-204ENST00000430071 PLCG2P16885 1265 aa20.59■□□□□ 0.89
UBE3D-204ENST00000430071 CAP2P40123 477 aa20.59■□□□□ 0.89
UBE3D-204ENST00000430071 DNAJC2Q99543 621 aaKnown RBP20.59■□□□□ 0.89
UBE3D-204ENST00000430071 GOLIM4O00461 696 aa20.58■□□□□ 0.88
UBE3D-204ENST00000430071 CHGBP05060 677 aa20.58■□□□□ 0.88
UBE3D-204ENST00000430071 LACTBP83111 547 aaPredicted RBP20.58■□□□□ 0.88
UBE3D-204ENST00000430071 LRRCC1Q9C099 1032 aa20.58■□□□□ 0.88
UBE3D-204ENST00000430071 BOLA2Q9H3K6 86 aa20.58■□□□□ 0.88
UBE3D-204ENST00000430071 PI4KBQ9UBF8 816 aa20.58■□□□□ 0.88
UBE3D-204ENST00000430071 PTCH2Q9Y6C5 1203 aa20.58■□□□□ 0.88
UBE3D-204ENST00000430071 MKI67P46013 3256 aaKnown RBP20.57■□□□□ 0.88
UBE3D-204ENST00000430071 EVX2Q03828 476 aa20.57■□□□□ 0.88
UBE3D-204ENST00000430071 MAP3K12Q12852 859 aa20.57■□□□□ 0.88
UBE3D-204ENST00000430071 SPP2Q13103 211 aa20.57■□□□□ 0.88
UBE3D-204ENST00000430071 RIOK1Q9BRS2 568 aaKnown RBP20.57■□□□□ 0.88
UBE3D-204ENST00000430071 PDE6AP16499 860 aa20.56■□□□□ 0.88
UBE3D-204ENST00000430071 TREML2Q5T2D2 321 aa20.56■□□□□ 0.88
UBE3D-204ENST00000430071 METTL16Q86W50 562 aaKnown RBP20.56■□□□□ 0.88
UBE3D-204ENST00000430071 SMC5Q8IY18 1101 aa20.56■□□□□ 0.88
UBE3D-204ENST00000430071 DHX36Q9H2U1 1008 aaKnown RBP20.56■□□□□ 0.88
UBE3D-204ENST00000430071 HERC5Q9UII4 1024 aaKnown RBP20.56■□□□□ 0.88
UBE3D-204ENST00000430071 TCRBV5S4A2TA0A5A2 114 aa20.55■□□□□ 0.88
UBE3D-204ENST00000430071 POTEFA5A3E0 1075 aa20.55■□□□□ 0.88
UBE3D-204ENST00000430071 GDF11O95390 407 aa20.55■□□□□ 0.88
UBE3D-204ENST00000430071 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.55■□□□□ 0.88
UBE3D-204ENST00000430071 GCC1Q96CN9 775 aa20.55■□□□□ 0.88
UBE3D-204ENST00000430071 ZNF532Q9HCE3 1301 aa20.54■□□□□ 0.88
UBE3D-204ENST00000430071 BCRP11274 1271 aa20.54■□□□□ 0.88
UBE3D-204ENST00000430071 USP5P45974 858 aa20.54■□□□□ 0.88
UBE3D-204ENST00000430071 SLC9C2Q5TAH2 1124 aa20.54■□□□□ 0.88
UBE3D-204ENST00000430071 FASTKD5Q7L8L6 764 aaKnown RBP20.54■□□□□ 0.88
UBE3D-204ENST00000430071 TRIM47Q96LD4 638 aa20.54■□□□□ 0.88
UBE3D-204ENST00000430071 IGSF3O75054 1194 aa20.53■□□□□ 0.88
UBE3D-204ENST00000430071 PSMC4P43686 418 aa20.53■□□□□ 0.88
UBE3D-204ENST00000430071 HMGCS2P54868 508 aa20.53■□□□□ 0.88
UBE3D-204ENST00000430071 FOXP4Q8IVH2 680 aaPredicted RBP20.53■□□□□ 0.88
UBE3D-204ENST00000430071 ZNF280CQ8ND82 737 aa20.53■□□□□ 0.88
UBE3D-204ENST00000430071 USP17L5A8MUK1 530 aa20.52■□□□□ 0.88
UBE3D-204ENST00000430071 ATP5JP18859 108 aa20.52■□□□□ 0.88
UBE3D-204ENST00000430071 TTF1Q15361 905 aaPredicted RBP20.52■□□□□ 0.88
UBE3D-204ENST00000430071 CRACR2BQ8N4Y2 399 aaPredicted RBP20.52■□□□□ 0.88
UBE3D-204ENST00000430071 PAG1Q9NWQ8 432 aa20.52■□□□□ 0.88
UBE3D-204ENST00000430071 MAGEB6P1A0A0J9YX57 407 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 739 ms