RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 SYCE3A1L190 88 aa11.29□□□□□ -0.6
NEDD1-203ENST00000429527 ENTPD3O75355 529 aa11.29□□□□□ -0.6
NEDD1-203ENST00000429527 GRIK5Q16478 980 aa11.29□□□□□ -0.6
NEDD1-203ENST00000429527 SLF2Q8IX21 1173 aa11.29□□□□□ -0.6
NEDD1-203ENST00000429527 ARMC9Q7Z3E5 817 aa11.29□□□□□ -0.6
NEDD1-203ENST00000429527 DEFB129Q9H1M3 183 aa11.29□□□□□ -0.6
NEDD1-203ENST00000429527 LIMCH1Q9UPQ0 1083 aa11.29□□□□□ -0.6
NEDD1-203ENST00000429527 NF2P35240 595 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 PHKA1P46020 1223 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 TNNI2P48788 182 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 METTL16Q86W50 562 aaKnown RBP11.28□□□□□ -0.6
NEDD1-203ENST00000429527 SMAP1Q8IYB5 467 aaPredicted RBP11.28□□□□□ -0.6
NEDD1-203ENST00000429527 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.28□□□□□ -0.6
NEDD1-203ENST00000429527 ATP6V1DQ9Y5K8 247 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.28□□□□□ -0.6
NEDD1-203ENST00000429527 GPR75-ASB3A0A0A6YYF3 556 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 PPP4CP60510 307 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 G3BP1Q13283 466 aaKnown RBP eCLIP11.28□□□□□ -0.6
NEDD1-203ENST00000429527 RASGRF1Q13972 1273 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 RUFY3Q7L099 469 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 ABT1Q9ULW3 272 aaKnown RBP11.28□□□□□ -0.6
NEDD1-203ENST00000429527 TBC1D12O60347 775 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 F13A1P00488 732 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 ADORA1P30542 326 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 INHBEP58166 350 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 NECTIN1Q15223 517 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 RHPN1Q8TCX5 695 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 FAM151AQ8WW52 585 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 MKRN1Q9UHC7 482 aaKnown RBP11.28□□□□□ -0.6
NEDD1-203ENST00000429527 DAGLAQ9Y4D2 1042 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 MROH7-TTC4A0A0A0MT08 1334 aa11.28□□□□□ -0.6
NEDD1-203ENST00000429527 USP2O75604 605 aaPredicted RBP11.27□□□□□ -0.61
NEDD1-203ENST00000429527 HUNKP57058 714 aa11.27□□□□□ -0.61
NEDD1-203ENST00000429527 GSTO1P78417 241 aa11.27□□□□□ -0.61
NEDD1-203ENST00000429527 ST3GAL1Q11201 340 aa11.27□□□□□ -0.61
NEDD1-203ENST00000429527 UTP14CQ5TAP6 766 aaKnown RBP11.27□□□□□ -0.61
NEDD1-203ENST00000429527 VPS37DQ86XT2 251 aa11.27□□□□□ -0.61
NEDD1-203ENST00000429527 HMG20BQ9P0W2 317 aa11.27□□□□□ -0.61
NEDD1-203ENST00000429527 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.27□□□□□ -0.61
NEDD1-203ENST00000429527 FOXN1O15353 648 aa11.27□□□□□ -0.61
NEDD1-203ENST00000429527 CTIFO43310 598 aaKnown RBP11.27□□□□□ -0.61
NEDD1-203ENST00000429527 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.27□□□□□ -0.61
NEDD1-203ENST00000429527 GREB1LQ9C091 1923 aaPredicted RBP11.26□□□□□ -0.61
NEDD1-203ENST00000429527 CYP4F22Q6NT55 531 aa11.26□□□□□ -0.61
NEDD1-203ENST00000429527 GINM1Q9NU53 330 aa11.26□□□□□ -0.61
NEDD1-203ENST00000429527 KDM4AO75164 1064 aa11.26□□□□□ -0.61
NEDD1-203ENST00000429527 GLRX3O76003 335 aaKnown RBP11.26□□□□□ -0.61
NEDD1-203ENST00000429527 LDHBP07195 334 aaKnown RBP11.26□□□□□ -0.61
NEDD1-203ENST00000429527 SPATA5Q8NB90 893 aa11.26□□□□□ -0.61
NEDD1-203ENST00000429527 ZNF384Q8TF68 577 aa11.26□□□□□ -0.61
NEDD1-203ENST00000429527 MTMR6Q9Y217 621 aa11.26□□□□□ -0.61
NEDD1-203ENST00000429527 EXOC6BQ9Y2D4 811 aa11.26□□□□□ -0.61
NEDD1-203ENST00000429527 STX6O43752 255 aa11.25□□□□□ -0.61
NEDD1-203ENST00000429527 HIP1O00291 1037 aa11.25□□□□□ -0.61
NEDD1-203ENST00000429527 CDC25BP30305 580 aa11.25□□□□□ -0.61
NEDD1-203ENST00000429527 RBM26Q5T8P6 1007 aaKnown RBP11.25□□□□□ -0.61
NEDD1-203ENST00000429527 SPRYD7Q5W111 196 aa11.25□□□□□ -0.61
NEDD1-203ENST00000429527 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.25□□□□□ -0.61
NEDD1-203ENST00000429527 NSUN4Q96CB9 384 aaKnown RBP11.25□□□□□ -0.61
NEDD1-203ENST00000429527 PCDHAC2Q9Y5I4 1007 aa11.25□□□□□ -0.61
NEDD1-203ENST00000429527 MYH1P12882 1939 aa11.25□□□□□ -0.61
NEDD1-203ENST00000429527 MANSC4A6NHS7 340 aaPredicted RBP11.25□□□□□ -0.61
NEDD1-203ENST00000429527 RASA3Q14644 834 aa11.25□□□□□ -0.61
NEDD1-203ENST00000429527 CDC42EP5Q6NZY7 148 aa11.25□□□□□ -0.61
NEDD1-203ENST00000429527 AIDAQ96BJ3 306 aa11.25□□□□□ -0.61
NEDD1-203ENST00000429527 WNK4Q96J92 1243 aa11.25□□□□□ -0.61
NEDD1-203ENST00000429527 PRDM4Q9UKN5 801 aa11.25□□□□□ -0.61
NEDD1-203ENST00000429527 GADD45BO75293 160 aaPredicted RBP11.24□□□□□ -0.61
NEDD1-203ENST00000429527 CAVIN2O95810 425 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 SYT1P21579 422 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 MCAMP43121 646 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 IREB2P48200 963 aaKnown RBP11.24□□□□□ -0.61
NEDD1-203ENST00000429527 RHBDL3P58872 404 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 MAP4K1Q92918 833 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 SIL1Q9H173 461 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 AK2P54819 239 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 SREBF2Q12772 1141 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 IFFO2Q5TF58 517 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 ANKRD13AQ8IZ07 590 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 KIAA1524Q8TCG1 905 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 ANKRD7Q92527 254 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 FAM198AQ9UFP1 575 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 A0A0G2JMZ2 1700 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 UQCRHLA0A096LP55 91 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 LDHCP07864 332 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 UQCRHP07919 91 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 FBXL16Q8N461 479 aa11.24□□□□□ -0.61
NEDD1-203ENST00000429527 DBNLQ9UJU6 430 aaKnown RBP11.24□□□□□ -0.61
NEDD1-203ENST00000429527 ALDH1A1P00352 501 aa11.23□□□□□ -0.61
NEDD1-203ENST00000429527 TIMM10P62072 90 aa11.23□□□□□ -0.61
NEDD1-203ENST00000429527 RUFY2Q8WXA3 655 aa11.23□□□□□ -0.61
NEDD1-203ENST00000429527 CSRNP1Q96S65 589 aa11.23□□□□□ -0.61
NEDD1-203ENST00000429527 KIF23Q02241 960 aaPredicted RBP11.23□□□□□ -0.61
NEDD1-203ENST00000429527 RASEFQ8IZ41 740 aa11.23□□□□□ -0.61
NEDD1-203ENST00000429527 FBXW7Q969H0 707 aa11.23□□□□□ -0.61
NEDD1-203ENST00000429527 TDRD3Q9H7E2 651 aaKnown RBP11.23□□□□□ -0.61
NEDD1-203ENST00000429527 KCNH4Q9UQ05 1017 aa11.23□□□□□ -0.61
NEDD1-203ENST00000429527 SLC45A1Q9Y2W3 748 aa11.23□□□□□ -0.61
NEDD1-203ENST00000429527 SPDYE5A6NIY4 337 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms