RNA–Protein interactions for RNA: ENST00000428962.2

THBS3-202, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 1,833 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-202ENST00000428962 TPTE2Q6XPS3 522 aa15.83■□□□□ 0.12
THBS3-202ENST00000428962 FBXO33Q7Z6M2 555 aa15.83■□□□□ 0.12
THBS3-202ENST00000428962 ADGRA1Q86SQ6 560 aa15.83■□□□□ 0.12
THBS3-202ENST00000428962 FAM84BQ96KN1 310 aaPredicted RBP15.83■□□□□ 0.12
THBS3-202ENST00000428962 TIGD1Q96MW7 591 aa15.83■□□□□ 0.12
THBS3-202ENST00000428962 RIOK1Q9BRS2 568 aaKnown RBP15.83■□□□□ 0.12
THBS3-202ENST00000428962 KIAA1468Q9P260 1216 aa15.83■□□□□ 0.12
THBS3-202ENST00000428962 RTCBQ9Y3I0 505 aaKnown RBP15.83■□□□□ 0.12
THBS3-202ENST00000428962 DUOX1Q9NRD9 1551 aa15.83■□□□□ 0.12
THBS3-202ENST00000428962 MINDY4BA8MYZ0 360 aa15.82■□□□□ 0.12
THBS3-202ENST00000428962 DNTTIP2Q5QJE6 756 aaKnown RBP15.82■□□□□ 0.12
THBS3-202ENST00000428962 AXDND1Q5T1B0 1012 aaPredicted RBP15.82■□□□□ 0.12
THBS3-202ENST00000428962 ZNF654Q8IZM8 581 aa15.82■□□□□ 0.12
THBS3-202ENST00000428962 SDR42E1Q8WUS8 393 aa15.82■□□□□ 0.12
THBS3-202ENST00000428962 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.82■□□□□ 0.12
THBS3-202ENST00000428962 ZBTB22O15209 634 aa15.82■□□□□ 0.12
THBS3-202ENST00000428962 ZNF202O95125 648 aa15.82■□□□□ 0.12
THBS3-202ENST00000428962 SLC3A2P08195 630 aaKnown RBP15.82■□□□□ 0.12
THBS3-202ENST00000428962 PFKFB1P16118 471 aa15.82■□□□□ 0.12
THBS3-202ENST00000428962 MRFAP1L1Q96HT8 127 aa15.82■□□□□ 0.12
THBS3-202ENST00000428962 BPIFA3Q9BQP9 254 aa15.82■□□□□ 0.12
THBS3-202ENST00000428962 CCNL1Q9UK58 526 aaPredicted RBP15.82■□□□□ 0.12
THBS3-202ENST00000428962 TNKSO95271 1327 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 TAF1P21675 1872 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 CUTAO60888 179 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 IGSF3O75054 1194 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 MMP1P03956 469 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 KCNQ4P56696 695 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 NOSTRINQ8IVI9 506 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 FANCBQ8NB91 859 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 KIAA1524Q8TCG1 905 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 MAP3K14Q99558 947 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 ZKSCAN3Q9BRR0 538 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 FOXP1Q9H334 677 aaPredicted RBP15.81■□□□□ 0.12
THBS3-202ENST00000428962 KCNF1Q9H3M0 494 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.81■□□□□ 0.12
THBS3-202ENST00000428962 CLIP2Q9UDT6 1046 aa15.81■□□□□ 0.12
THBS3-202ENST00000428962 TRIM37O94972 964 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 PTGS1P23219 599 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 HIBADHP31937 336 aaKnown RBP15.8■□□□□ 0.12
THBS3-202ENST00000428962 TPM4P67936 248 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 PTPAQ15257 358 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 CRACR2BQ8N4Y2 399 aaPredicted RBP15.8■□□□□ 0.12
THBS3-202ENST00000428962 SRP68Q9UHB9 627 aaKnown RBP15.8■□□□□ 0.12
THBS3-202ENST00000428962 MROH7-TTC4A0A0A0MT08 1334 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 FAM237AA0A1B0GTK4 181 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 CALM1P0DP23 149 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 CALM2P0DP24 149 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 CALM3P0DP25 149 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 XBP1P17861 261 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 MARCKSP29966 332 aaPredicted RBP15.8■□□□□ 0.12
THBS3-202ENST00000428962 SYKP43405 635 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 SEC23AQ15436 765 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 NBPF11Q86T75 865 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 IQCA1Q86XH1 822 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 DHX40Q8IX18 779 aaKnown RBP15.8■□□□□ 0.12
THBS3-202ENST00000428962 NUP133Q8WUM0 1156 aa15.8■□□□□ 0.12
THBS3-202ENST00000428962 RNF26Q9BY78 433 aaPredicted RBP15.8■□□□□ 0.12
THBS3-202ENST00000428962 CRNKL1Q9BZJ0 848 aaKnown RBP15.8■□□□□ 0.12
THBS3-202ENST00000428962 LAMB1P07942 1786 aa15.79■□□□□ 0.12
THBS3-202ENST00000428962 LY75O60449 1722 aa15.79■□□□□ 0.12
THBS3-202ENST00000428962 WDHD1O75717 1129 aaPredicted RBP15.79■□□□□ 0.12
THBS3-202ENST00000428962 AKAP17AQ02040 695 aaKnown RBP15.79■□□□□ 0.12
THBS3-202ENST00000428962 RILPL1Q5EBL4 403 aa15.79■□□□□ 0.12
THBS3-202ENST00000428962 CCDC186Q7Z3E2 898 aa15.79■□□□□ 0.12
THBS3-202ENST00000428962 CATIPQ7Z7H3 387 aa15.79■□□□□ 0.12
THBS3-202ENST00000428962 DIS3L2Q8IYB7 885 aaKnown RBP15.79■□□□□ 0.12
THBS3-202ENST00000428962 NSUN4Q96CB9 384 aaKnown RBP15.79■□□□□ 0.12
THBS3-202ENST00000428962 PRIMPOLQ96LW4 560 aa15.79■□□□□ 0.12
THBS3-202ENST00000428962 ZSCAN10Q96SZ4 725 aaPredicted RBP15.79■□□□□ 0.12
THBS3-202ENST00000428962 RBM28Q9NW13 759 aaKnown RBP15.79■□□□□ 0.12
THBS3-202ENST00000428962 HPSEQ9Y251 543 aa15.79■□□□□ 0.12
THBS3-202ENST00000428962 DLEC1Q9Y238 1755 aa15.79■□□□□ 0.12
THBS3-202ENST00000428962 NPHP1O15259 732 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 NEMFO60524 1076 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 FGRP09769 529 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 NLRP12P59046 1061 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 DYNLL1P63167 89 aaKnown RBP15.78■□□□□ 0.12
THBS3-202ENST00000428962 RESP18Q5W5W9 173 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 SPTY2D1Q68D10 685 aaPredicted RBP15.78■□□□□ 0.12
THBS3-202ENST00000428962 STK11IPQ8N1F8 1099 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 AOPEPQ8N6M6 819 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 TAF1LQ8IZX4 1826 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 KIAA1551Q9HCM1 1747 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 UQCRHLA0A096LP55 91 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 UQCRHP07919 91 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 NT5C2P49902 561 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 MECOMQ03112 1051 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 EN1Q05925 392 aaPredicted RBP15.78■□□□□ 0.12
THBS3-202ENST00000428962 IFIT1BQ5T764 474 aaKnown RBP15.78■□□□□ 0.12
THBS3-202ENST00000428962 KRI1Q8N9T8 703 aaKnown RBP15.78■□□□□ 0.12
THBS3-202ENST00000428962 TAOK2Q9UL54 1235 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 PYCARDQ9ULZ3 195 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 CEP131Q9UPN4 1083 aa15.78■□□□□ 0.12
THBS3-202ENST00000428962 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.77■□□□□ 0.11
THBS3-202ENST00000428962 SMTNL1A8MU46 457 aa15.77■□□□□ 0.11
THBS3-202ENST00000428962 DDAH1O94760 285 aa15.77■□□□□ 0.11
THBS3-202ENST00000428962 NOL10Q9BSC4 688 aaKnown RBP15.77■□□□□ 0.11
THBS3-202ENST00000428962 ATP8A2Q9NTI2 1148 aa15.77■□□□□ 0.11
THBS3-202ENST00000428962 ARPP21Q9UBL0 812 aaPredicted RBP15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms