RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 SLC34A2O95436 690 aa20.93■□□□□ 0.94
TRIM39-209ENST00000428728 FMNL1O95466 1100 aaPredicted RBP20.93■□□□□ 0.94
TRIM39-209ENST00000428728 GNRH1P01148 92 aa20.93■□□□□ 0.94
TRIM39-209ENST00000428728 CYP2E1P05181 493 aaPredicted RBP20.93■□□□□ 0.94
TRIM39-209ENST00000428728 ZAP70P43403 619 aa20.93■□□□□ 0.94
TRIM39-209ENST00000428728 SLC4A8Q2Y0W8 1093 aa20.93■□□□□ 0.94
TRIM39-209ENST00000428728 CEP85Q6P2H3 762 aa20.93■□□□□ 0.94
TRIM39-209ENST00000428728 CCDC8Q9H0W5 538 aaPredicted RBP20.93■□□□□ 0.94
TRIM39-209ENST00000428728 NOP58Q9Y2X3 529 aaKnown RBP20.93■□□□□ 0.94
TRIM39-209ENST00000428728 DOCK3Q8IZD9 2030 aa20.93■□□□□ 0.94
TRIM39-209ENST00000428728 TBC1D12O60347 775 aa20.92■□□□□ 0.94
TRIM39-209ENST00000428728 OSBPP22059 807 aa20.92■□□□□ 0.94
TRIM39-209ENST00000428728 ADGRA1Q86SQ6 560 aa20.92■□□□□ 0.94
TRIM39-209ENST00000428728 SRRDQ9UH36 339 aa20.92■□□□□ 0.94
TRIM39-209ENST00000428728 NAV1Q8NEY1 1877 aa20.92■□□□□ 0.94
TRIM39-209ENST00000428728 BAG3O95817 575 aa20.91■□□□□ 0.94
TRIM39-209ENST00000428728 BCRP11274 1271 aa20.91■□□□□ 0.94
TRIM39-209ENST00000428728 PRMT2P55345 433 aa20.91■□□□□ 0.94
TRIM39-209ENST00000428728 MYPNQ86TC9 1320 aa20.91■□□□□ 0.94
TRIM39-209ENST00000428728 EAF2Q96CJ1 260 aaPredicted RBP20.91■□□□□ 0.94
TRIM39-209ENST00000428728 PIH1D3Q9NQM4 214 aaKnown RBP20.91■□□□□ 0.94
TRIM39-209ENST00000428728 EXOC6BQ9Y2D4 811 aa20.91■□□□□ 0.94
TRIM39-209ENST00000428728 PLCG2P16885 1265 aa20.9■□□□□ 0.94
TRIM39-209ENST00000428728 MAPKAPK5Q8IW41 473 aa20.9■□□□□ 0.94
TRIM39-209ENST00000428728 RAET1EQ8TD07 263 aa20.9■□□□□ 0.94
TRIM39-209ENST00000428728 SMCR8Q8TEV9 937 aaPredicted RBP20.9■□□□□ 0.94
TRIM39-209ENST00000428728 TGFBRAP1Q8WUH2 860 aa20.9■□□□□ 0.94
TRIM39-209ENST00000428728 ZNF512BQ96KM6 892 aaPredicted RBP20.9■□□□□ 0.94
TRIM39-209ENST00000428728 FLT1P17948 1338 aa20.89■□□□□ 0.93
TRIM39-209ENST00000428728 HOXD10P28358 340 aa20.89■□□□□ 0.93
TRIM39-209ENST00000428728 AGTPBP1Q9UPW5 1226 aa20.89■□□□□ 0.93
TRIM39-209ENST00000428728 MKI67P46013 3256 aaKnown RBP20.88■□□□□ 0.93
TRIM39-209ENST00000428728 DDX60LQ5H9U9 1706 aaKnown RBP20.88■□□□□ 0.93
TRIM39-209ENST00000428728 IDH1O75874 414 aaKnown RBP20.88■□□□□ 0.93
TRIM39-209ENST00000428728 FCGRTP55899 365 aa20.88■□□□□ 0.93
TRIM39-209ENST00000428728 RRP1BQ14684 758 aaKnown RBP20.88■□□□□ 0.93
TRIM39-209ENST00000428728 TREML2Q5T2D2 321 aa20.88■□□□□ 0.93
TRIM39-209ENST00000428728 HERC5Q9UII4 1024 aaKnown RBP20.88■□□□□ 0.93
TRIM39-209ENST00000428728 SLC45A1Q9Y2W3 748 aa20.88■□□□□ 0.93
TRIM39-209ENST00000428728 NDUFB9Q9Y6M9 179 aa20.88■□□□□ 0.93
TRIM39-209ENST00000428728 CAP2P40123 477 aa20.87■□□□□ 0.93
TRIM39-209ENST00000428728 DYNLL1P63167 89 aaKnown RBP20.87■□□□□ 0.93
TRIM39-209ENST00000428728 PRKCZQ05513 592 aa20.87■□□□□ 0.93
TRIM39-209ENST00000428728 SPP2Q13103 211 aa20.87■□□□□ 0.93
TRIM39-209ENST00000428728 AACSQ86V21 672 aa20.87■□□□□ 0.93
TRIM39-209ENST00000428728 PI4KBQ9UBF8 816 aa20.87■□□□□ 0.93
TRIM39-209ENST00000428728 SAP30BPQ9UHR5 308 aaKnown RBP20.87■□□□□ 0.93
TRIM39-209ENST00000428728 MYH7P12883 1935 aa20.86■□□□□ 0.93
TRIM39-209ENST00000428728 MYH8P13535 1937 aa20.86■□□□□ 0.93
TRIM39-209ENST00000428728 CYP7A1P22680 504 aa20.86■□□□□ 0.93
TRIM39-209ENST00000428728 GRK4P32298 578 aa20.86■□□□□ 0.93
TRIM39-209ENST00000428728 HMGCS2P54868 508 aa20.86■□□□□ 0.93
TRIM39-209ENST00000428728 PPP4CP60510 307 aa20.86■□□□□ 0.93
TRIM39-209ENST00000428728 MTFR1Q15390 333 aa20.86■□□□□ 0.93
TRIM39-209ENST00000428728 ERC1Q8IUD2 1116 aa20.86■□□□□ 0.93
TRIM39-209ENST00000428728 CRACR2BQ8N4Y2 399 aaPredicted RBP20.86■□□□□ 0.93
TRIM39-209ENST00000428728 ZNF280CQ8ND82 737 aa20.86■□□□□ 0.93
TRIM39-209ENST00000428728 TRIM34Q9BYJ4 488 aa20.86■□□□□ 0.93
TRIM39-209ENST00000428728 DHX36Q9H2U1 1008 aaKnown RBP20.86■□□□□ 0.93
TRIM39-209ENST00000428728 USP17L5A8MUK1 530 aa20.85■□□□□ 0.93
TRIM39-209ENST00000428728 MIGA1Q8NAN2 632 aa20.85■□□□□ 0.93
TRIM39-209ENST00000428728 PROCA1Q8NCQ7 364 aaPredicted RBP20.85■□□□□ 0.93
TRIM39-209ENST00000428728 DNAJC18Q9H819 358 aa20.85■□□□□ 0.93
TRIM39-209ENST00000428728 IL1RAPL2Q9NP60 686 aa20.85■□□□□ 0.93
TRIM39-209ENST00000428728 BIN2Q9UBW5 565 aaPredicted RBP20.85■□□□□ 0.93
TRIM39-209ENST00000428728 PNMA3Q9UL41 463 aa20.85■□□□□ 0.93
TRIM39-209ENST00000428728 PALD1Q9ULE6 856 aa20.85■□□□□ 0.93
TRIM39-209ENST00000428728 GABRQQ9UN88 632 aa20.85■□□□□ 0.93
TRIM39-209ENST00000428728 APBB1O00213 710 aa20.84■□□□□ 0.93
TRIM39-209ENST00000428728 ANKRD13CQ8N6S4 541 aa20.84■□□□□ 0.93
TRIM39-209ENST00000428728 MAGEB6Q8N7X4 407 aa20.84■□□□□ 0.93
TRIM39-209ENST00000428728 TBC1D2Q9BYX2 928 aa20.84■□□□□ 0.93
TRIM39-209ENST00000428728 BCL11AQ9H165 835 aa20.84■□□□□ 0.93
TRIM39-209ENST00000428728 ANTXR1Q9H6X2 564 aa20.84■□□□□ 0.93
TRIM39-209ENST00000428728 AS3MTQ9HBK9 375 aa20.84■□□□□ 0.93
TRIM39-209ENST00000428728 TNPO2O14787 897 aaKnown RBP20.83■□□□□ 0.93
TRIM39-209ENST00000428728 GDF11O95390 407 aa20.83■□□□□ 0.93
TRIM39-209ENST00000428728 MS4A1P11836 297 aa20.83■□□□□ 0.93
TRIM39-209ENST00000428728 SHROOM1Q2M3G4 852 aaPredicted RBP20.83■□□□□ 0.93
TRIM39-209ENST00000428728 COG6Q9Y2V7 657 aa20.83■□□□□ 0.93
TRIM39-209ENST00000428728 PLXNB2O15031 1838 aa20.83■□□□□ 0.92
TRIM39-209ENST00000428728 MTMR2Q13614 643 aa20.82■□□□□ 0.92
TRIM39-209ENST00000428728 HSP90AB4PQ58FF6 505 aa20.82■□□□□ 0.92
TRIM39-209ENST00000428728 RHPN1Q8TCX5 695 aa20.82■□□□□ 0.92
TRIM39-209ENST00000428728 IGSF3O75054 1194 aa20.81■□□□□ 0.92
TRIM39-209ENST00000428728 HLA-DOAP06340 250 aa20.81■□□□□ 0.92
TRIM39-209ENST00000428728 ASNSP08243 561 aa20.81■□□□□ 0.92
TRIM39-209ENST00000428728 CCL5P13501 91 aa20.81■□□□□ 0.92
TRIM39-209ENST00000428728 FLT3LGP49771 235 aa20.81■□□□□ 0.92
TRIM39-209ENST00000428728 JAG1P78504 1218 aa20.81■□□□□ 0.92
TRIM39-209ENST00000428728 SLAIN1Q8ND83 568 aa20.81■□□□□ 0.92
TRIM39-209ENST00000428728 SHISA4Q96DD7 197 aa20.81■□□□□ 0.92
TRIM39-209ENST00000428728 TAOK2Q9UL54 1235 aa20.81■□□□□ 0.92
TRIM39-209ENST00000428728 BAZ2AQ9UIF9 1905 aaKnown RBP20.8■□□□□ 0.92
TRIM39-209ENST00000428728 USP5P45974 858 aa20.8■□□□□ 0.92
TRIM39-209ENST00000428728 UBXN2AP68543 259 aa20.8■□□□□ 0.92
TRIM39-209ENST00000428728 MAP3K12Q12852 859 aa20.8■□□□□ 0.92
TRIM39-209ENST00000428728 PABPC4Q13310 644 aaKnown RBP eCLIP20.8■□□□□ 0.92
TRIM39-209ENST00000428728 FAM110CQ1W6H9 321 aa20.8■□□□□ 0.92
TRIM39-209ENST00000428728 ZBTB21Q9ULJ3 1066 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms