RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 AACSQ86V21 672 aa33.3■■■□□ 2.92
LMO1-202ENST00000428101 RCAN3Q9UKA8 241 aa33.3■■■□□ 2.92
LMO1-202ENST00000428101 DDX19BQ9UMR2 479 aa33.3■■■□□ 2.92
LMO1-202ENST00000428101 RRP1BQ14684 758 aaKnown RBP33.29■■■□□ 2.92
LMO1-202ENST00000428101 TGFBRAP1Q8WUH2 860 aa33.29■■■□□ 2.92
LMO1-202ENST00000428101 PARK7Q99497 189 aaKnown RBP33.29■■■□□ 2.92
LMO1-202ENST00000428101 NDUFB9Q9Y6M9 179 aa33.29■■■□□ 2.92
LMO1-202ENST00000428101 ATAD5Q96QE3 1844 aa33.28■■■□□ 2.92
LMO1-202ENST00000428101 TRIM75PA6NK02 468 aa33.28■■■□□ 2.92
LMO1-202ENST00000428101 CYP2C8P10632 490 aa33.28■■■□□ 2.92
LMO1-202ENST00000428101 HSP90AB4PQ58FF6 505 aa33.28■■■□□ 2.92
LMO1-202ENST00000428101 SIRT2Q8IXJ6 389 aa33.28■■■□□ 2.92
LMO1-202ENST00000428101 RPAP2Q8IXW5 612 aaPredicted RBP33.28■■■□□ 2.92
LMO1-202ENST00000428101 RHPN1Q8TCX5 695 aa33.28■■■□□ 2.92
LMO1-202ENST00000428101 IL1RAPL2Q9NP60 686 aa33.28■■■□□ 2.92
LMO1-202ENST00000428101 RBBP6Q7Z6E9 1792 aaKnown RBP33.28■■■□□ 2.92
LMO1-202ENST00000428101 GNRH1P01148 92 aa33.27■■■□□ 2.92
LMO1-202ENST00000428101 GADL1Q6ZQY3 521 aa33.27■■■□□ 2.92
LMO1-202ENST00000428101 MAPKAPK5Q8IW41 473 aa33.27■■■□□ 2.92
LMO1-202ENST00000428101 ZNF333Q96JL9 665 aa33.27■■■□□ 2.92
LMO1-202ENST00000428101 DHX36Q9H2U1 1008 aaKnown RBP33.27■■■□□ 2.92
LMO1-202ENST00000428101 PI4KBQ9UBF8 816 aa33.27■■■□□ 2.92
LMO1-202ENST00000428101 HERC5Q9UII4 1024 aaKnown RBP33.27■■■□□ 2.92
LMO1-202ENST00000428101 ECM2O94769 699 aaPredicted RBP33.26■■■□□ 2.91
LMO1-202ENST00000428101 ANTXR1Q9H6X2 564 aa33.26■■■□□ 2.91
LMO1-202ENST00000428101 FLT1P17948 1338 aa33.26■■■□□ 2.91
LMO1-202ENST00000428101 IDH1O75874 414 aaKnown RBP33.25■■■□□ 2.91
LMO1-202ENST00000428101 BCRP11274 1271 aa33.25■■■□□ 2.91
LMO1-202ENST00000428101 CYP7A1P22680 504 aa33.25■■■□□ 2.91
LMO1-202ENST00000428101 CAP2P40123 477 aa33.25■■■□□ 2.91
LMO1-202ENST00000428101 PSMC4P43686 418 aa33.25■■■□□ 2.91
LMO1-202ENST00000428101 DYNLL1P63167 89 aaKnown RBP33.25■■■□□ 2.91
LMO1-202ENST00000428101 SLC9C1Q4G0N8 1177 aa33.25■■■□□ 2.91
LMO1-202ENST00000428101 TRIM47Q96LD4 638 aa33.25■■■□□ 2.91
LMO1-202ENST00000428101 SLC45A1Q9Y2W3 748 aa33.25■■■□□ 2.91
LMO1-202ENST00000428101 NBPF11Q86T75 865 aa33.23■■■□□ 2.91
LMO1-202ENST00000428101 PRMT2P55345 433 aa33.22■■■□□ 2.91
LMO1-202ENST00000428101 METTL16Q86W50 562 aaKnown RBP33.22■■■□□ 2.91
LMO1-202ENST00000428101 MAGEB6Q8N7X4 407 aa33.22■■■□□ 2.91
LMO1-202ENST00000428101 DNAJC18Q9H819 358 aa33.22■■■□□ 2.91
LMO1-202ENST00000428101 PALD1Q9ULE6 856 aa33.22■■■□□ 2.91
LMO1-202ENST00000428101 MGAMO43451 1857 aa33.21■■■□□ 2.91
LMO1-202ENST00000428101 SPP2Q13103 211 aa33.21■■■□□ 2.91
LMO1-202ENST00000428101 KIF1BPQ96EK5 621 aa33.21■■■□□ 2.91
LMO1-202ENST00000428101 SRRDQ9UH36 339 aa33.21■■■□□ 2.91
LMO1-202ENST00000428101 APBB1O00213 710 aa33.2■■■□□ 2.91
LMO1-202ENST00000428101 HMMRO75330 724 aa33.2■■■□□ 2.91
LMO1-202ENST00000428101 MIGA1Q8NAN2 632 aa33.2■■■□□ 2.91
LMO1-202ENST00000428101 ZNF280CQ8ND82 737 aa33.2■■■□□ 2.91
LMO1-202ENST00000428101 SH3TC2Q8TF17 1288 aa33.2■■■□□ 2.91
LMO1-202ENST00000428101 AGTPBP1Q9UPW5 1226 aa33.2■■■□□ 2.91
LMO1-202ENST00000428101 FMNL1O95466 1100 aaPredicted RBP33.19■■■□□ 2.9
LMO1-202ENST00000428101 OSBPP22059 807 aa33.19■■■□□ 2.9
LMO1-202ENST00000428101 TREML2Q5T2D2 321 aa33.19■■■□□ 2.9
LMO1-202ENST00000428101 C20orf194Q5TEA3 1177 aa33.19■■■□□ 2.9
LMO1-202ENST00000428101 FOXP4Q8IVH2 680 aaPredicted RBP33.19■■■□□ 2.9
LMO1-202ENST00000428101 CLASRPQ8N2M8 674 aaKnown RBP33.19■■■□□ 2.9
LMO1-202ENST00000428101 TBC1D2Q9BYX2 928 aa33.19■■■□□ 2.9
LMO1-202ENST00000428101 USP17L5A8MUK1 530 aa33.18■■■□□ 2.9
LMO1-202ENST00000428101 EN2P19622 333 aaPredicted RBP33.18■■■□□ 2.9
LMO1-202ENST00000428101 MAP3K12Q12852 859 aa33.18■■■□□ 2.9
LMO1-202ENST00000428101 SAP30BPQ9UHR5 308 aaKnown RBP33.18■■■□□ 2.9
LMO1-202ENST00000428101 LOC285556D6RIA3 1793 aa33.18■■■□□ 2.9
LMO1-202ENST00000428101 MYH1P12882 1939 aa33.18■■■□□ 2.9
LMO1-202ENST00000428101 HOXD10P28358 340 aa33.17■■■□□ 2.9
LMO1-202ENST00000428101 JAG1P78504 1218 aa33.17■■■□□ 2.9
LMO1-202ENST00000428101 PROCA1Q8NCQ7 364 aaPredicted RBP33.17■■■□□ 2.9
LMO1-202ENST00000428101 TMEM106CQ9BVX2 250 aa33.17■■■□□ 2.9
LMO1-202ENST00000428101 CHMP4BQ9H444 224 aaKnown RBP33.16■■■□□ 2.9
LMO1-202ENST00000428101 RAB11FIP3O75154 756 aa33.15■■■□□ 2.9
LMO1-202ENST00000428101 TMED8Q6PL24 325 aaPredicted RBP33.15■■■□□ 2.9
LMO1-202ENST00000428101 CERS3Q8IU89 383 aa33.15■■■□□ 2.9
LMO1-202ENST00000428101 HMGCS2P54868 508 aa33.14■■■□□ 2.9
LMO1-202ENST00000428101 FCGRTP55899 365 aa33.14■■■□□ 2.9
LMO1-202ENST00000428101 PDE3AQ14432 1141 aa33.14■■■□□ 2.9
LMO1-202ENST00000428101 SHROOM1Q2M3G4 852 aaPredicted RBP33.14■■■□□ 2.9
LMO1-202ENST00000428101 CRACR2BQ8N4Y2 399 aaPredicted RBP33.14■■■□□ 2.9
LMO1-202ENST00000428101 SMCR8Q8TEV9 937 aaPredicted RBP33.14■■■□□ 2.9
LMO1-202ENST00000428101 PPIL4Q8WUA2 492 aaKnown RBP eCLIP33.14■■■□□ 2.9
LMO1-202ENST00000428101 MYPNQ86TC9 1320 aa33.13■■■□□ 2.89
LMO1-202ENST00000428101 MYCP01106 439 aaPredicted RBP33.13■■■□□ 2.89
LMO1-202ENST00000428101 IFIT2P09913 472 aaKnown RBP33.13■■■□□ 2.89
LMO1-202ENST00000428101 SLC4A8Q2Y0W8 1093 aa33.13■■■□□ 2.89
LMO1-202ENST00000428101 SH3D19Q5HYK7 790 aa33.13■■■□□ 2.89
LMO1-202ENST00000428101 WDR18Q9BV38 432 aa33.13■■■□□ 2.89
LMO1-202ENST00000428101 AS3MTQ9HBK9 375 aa33.13■■■□□ 2.89
LMO1-202ENST00000428101 HLA-DOAP06340 250 aa33.12■■■□□ 2.89
LMO1-202ENST00000428101 ASNSP08243 561 aa33.12■■■□□ 2.89
LMO1-202ENST00000428101 TTF1Q15361 905 aaPredicted RBP33.12■■■□□ 2.89
LMO1-202ENST00000428101 RIOK1Q9BRS2 568 aaKnown RBP33.12■■■□□ 2.89
LMO1-202ENST00000428101 TRIM34Q9BYJ4 488 aa33.12■■■□□ 2.89
LMO1-202ENST00000428101 DOCK3Q8IZD9 2030 aa33.11■■■□□ 2.89
LMO1-202ENST00000428101 USP5P45974 858 aa33.11■■■□□ 2.89
LMO1-202ENST00000428101 PRKCZQ05513 592 aa33.11■■■□□ 2.89
LMO1-202ENST00000428101 PRPF38BQ5VTL8 546 aaKnown RBP33.11■■■□□ 2.89
LMO1-202ENST00000428101 RAET1EQ8TD07 263 aa33.11■■■□□ 2.89
LMO1-202ENST00000428101 PNMA3Q9UL41 463 aa33.11■■■□□ 2.89
LMO1-202ENST00000428101 GDF11O95390 407 aa33.1■■■□□ 2.89
LMO1-202ENST00000428101 BCL11AQ9H165 835 aa33.1■■■□□ 2.89
LMO1-202ENST00000428101 GABRQQ9UN88 632 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms