RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 CCDC8Q9H0W5 538 aaPredicted RBP10.79□□□□□ -0.68
LINC00963-204ENST00000427778 USP40Q9NVE5 1235 aa10.79□□□□□ -0.68
LINC00963-204ENST00000427778 SIPA1L1O43166 1804 aa10.79□□□□□ -0.68
LINC00963-204ENST00000427778 DOCK1Q14185 1865 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 PTPRFP10586 1907 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 FKTNO75072 461 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 BTDP43251 543 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 TM4SF4P48230 202 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 AAMPQ13685 434 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 PRKG1Q13976 671 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 DCAF15Q66K64 600 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.78□□□□□ -0.68
LINC00963-204ENST00000427778 CLMNQ96JQ2 1002 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 CFHR5Q9BXR6 569 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 DCTPP1Q9H773 170 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 IL1RAPL2Q9NP60 686 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 LRP2BPQ9P2M1 347 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 FZD1Q9UP38 647 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 DDX60LQ5H9U9 1706 aaKnown RBP10.78□□□□□ -0.68
LINC00963-204ENST00000427778 MYH1P12882 1939 aa10.78□□□□□ -0.68
LINC00963-204ENST00000427778 PHIPQ8WWQ0 1821 aa10.77□□□□□ -0.68
LINC00963-204ENST00000427778 ATAD5Q96QE3 1844 aa10.77□□□□□ -0.68
LINC00963-204ENST00000427778 ZAP70P43403 619 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 RGS3P49796 1198 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 INHBEP58166 350 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 PPP4CP60510 307 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 MAP3K10Q02779 954 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 SREBF2Q12772 1141 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 VGLL4Q14135 290 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 SLC10A4Q96EP9 437 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 WNK4Q96J92 1243 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 LRRCC1Q9C099 1032 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 PIH1D3Q9NQM4 214 aaKnown RBP10.77□□□□□ -0.69
LINC00963-204ENST00000427778 SNRKQ9NRH2 765 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 RAI14Q9P0K7 980 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 ZNF112Q9UJU3 913 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 COL6A3P12111 3177 aa10.77□□□□□ -0.69
LINC00963-204ENST00000427778 CUL9Q8IWT3 2517 aa10.76□□□□□ -0.69
LINC00963-204ENST00000427778 MANSC4A6NHS7 340 aaPredicted RBP10.76□□□□□ -0.69
LINC00963-204ENST00000427778 IFIT2P09913 472 aaKnown RBP10.76□□□□□ -0.69
LINC00963-204ENST00000427778 MAP3K9P80192 1104 aa10.76□□□□□ -0.69
LINC00963-204ENST00000427778 NAA16Q6N069 864 aaPredicted RBP10.76□□□□□ -0.69
LINC00963-204ENST00000427778 CERS3Q8IU89 383 aa10.76□□□□□ -0.69
LINC00963-204ENST00000427778 ZNF710Q8N1W2 664 aa10.76□□□□□ -0.69
LINC00963-204ENST00000427778 ZNF341Q9BYN7 854 aa10.76□□□□□ -0.69
LINC00963-204ENST00000427778 DDX4Q9NQI0 724 aaKnown RBP10.76□□□□□ -0.69
LINC00963-204ENST00000427778 CSADQ9Y600 493 aa10.76□□□□□ -0.69
LINC00963-204ENST00000427778 TESPA1A2RU30 521 aaPredicted RBP10.75□□□□□ -0.69
LINC00963-204ENST00000427778 SPDYE5A6NIY4 337 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 BAG3O95817 575 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 ATP5JP18859 108 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 GJA5P36382 358 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 TCP10Q12799 353 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 TTF1Q15361 905 aaPredicted RBP10.75□□□□□ -0.69
LINC00963-204ENST00000427778 NOL9Q5SY16 702 aaKnown RBP10.75□□□□□ -0.69
LINC00963-204ENST00000427778 SH3BP5LQ7L8J4 393 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 ADGRA1Q86SQ6 560 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 ZFPM1Q8IX07 1006 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 SLC17A8Q8NDX2 589 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 WRNIP1Q96S55 665 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 TRIM17Q9Y577 477 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 PCDHB15Q9Y5E8 787 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 SNCAIPQ9Y6H5 919 aa10.75□□□□□ -0.69
LINC00963-204ENST00000427778 NAV1Q8NEY1 1877 aa10.74□□□□□ -0.69
LINC00963-204ENST00000427778 APBB1O00213 710 aa10.74□□□□□ -0.69
LINC00963-204ENST00000427778 TBC1D12O60347 775 aa10.74□□□□□ -0.69
LINC00963-204ENST00000427778 ALDH1A1P00352 501 aa10.74□□□□□ -0.69
LINC00963-204ENST00000427778 MAP3K12Q12852 859 aa10.74□□□□□ -0.69
LINC00963-204ENST00000427778 ERO1BQ86YB8 467 aa10.74□□□□□ -0.69
LINC00963-204ENST00000427778 OPTNQ96CV9 577 aa10.74□□□□□ -0.69
LINC00963-204ENST00000427778 NOL10Q9BSC4 688 aaKnown RBP10.74□□□□□ -0.69
LINC00963-204ENST00000427778 ELP3Q9H9T3 547 aa10.74□□□□□ -0.69
LINC00963-204ENST00000427778 DDTLA6NHG4 134 aaPredicted RBP10.73□□□□□ -0.69
LINC00963-204ENST00000427778 PHF20L1A8MW92 1017 aa10.73□□□□□ -0.69
LINC00963-204ENST00000427778 IDH1O75874 414 aaKnown RBP10.73□□□□□ -0.69
LINC00963-204ENST00000427778 PPIL2Q13356 520 aa10.73□□□□□ -0.69
LINC00963-204ENST00000427778 HDAC1Q13547 482 aaPredicted RBP10.73□□□□□ -0.69
LINC00963-204ENST00000427778 GSE1Q14687 1217 aa10.73□□□□□ -0.69
LINC00963-204ENST00000427778 OTOP1Q7RTM1 612 aa10.73□□□□□ -0.69
LINC00963-204ENST00000427778 TEX11Q8IYF3 940 aa10.73□□□□□ -0.69
LINC00963-204ENST00000427778 SH3RF3Q8TEJ3 882 aaPredicted RBP10.73□□□□□ -0.69
LINC00963-204ENST00000427778 RNF166Q96A37 237 aaPredicted RBP10.73□□□□□ -0.69
LINC00963-204ENST00000427778 MS4A4AQ96JQ5 239 aa10.73□□□□□ -0.69
LINC00963-204ENST00000427778 CRBNQ96SW2 442 aa10.73□□□□□ -0.69
LINC00963-204ENST00000427778 HAUS7Q99871 368 aa10.73□□□□□ -0.69
LINC00963-204ENST00000427778 OSBPL5Q9H0X9 879 aaPredicted RBP10.73□□□□□ -0.69
LINC00963-204ENST00000427778 ANTXR1Q9H6X2 564 aa10.73□□□□□ -0.69
LINC00963-204ENST00000427778 RANBP2P49792 3224 aaKnown RBP10.73□□□□□ -0.69
LINC00963-204ENST00000427778 ZSWIM8A7E2V4 1837 aa10.72□□□□□ -0.69
LINC00963-204ENST00000427778 EN2P19622 333 aaPredicted RBP10.72□□□□□ -0.69
LINC00963-204ENST00000427778 CYP7A1P22680 504 aa10.72□□□□□ -0.69
LINC00963-204ENST00000427778 INPP5BP32019 993 aa10.72□□□□□ -0.69
LINC00963-204ENST00000427778 GTF2A2P52657 109 aa10.72□□□□□ -0.69
LINC00963-204ENST00000427778 PPATQ06203 517 aa10.72□□□□□ -0.69
LINC00963-204ENST00000427778 PICALMQ13492 652 aa10.72□□□□□ -0.69
LINC00963-204ENST00000427778 MIGA2Q7L4E1 593 aa10.72□□□□□ -0.69
LINC00963-204ENST00000427778 METTL16Q86W50 562 aaKnown RBP10.72□□□□□ -0.69
LINC00963-204ENST00000427778 ZKSCAN4Q969J2 545 aaPredicted RBP10.72□□□□□ -0.69
LINC00963-204ENST00000427778 DHX36Q9H2U1 1008 aaKnown RBP10.72□□□□□ -0.69
LINC00963-204ENST00000427778 R3HDMLQ9H3Y0 253 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms