RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 ACTN3Q08043 901 aaPredicted RBP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 TRIM14Q14142 442 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 PDIA5Q14554 519 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 LRRC23Q53EV4 343 aaPredicted RBP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 HSP90AB2PQ58FF8 381 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 KCNV1Q6PIU1 500 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 NOL8Q76FK4 1167 aaKnown RBP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 RUFY3Q7L099 469 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 CACNA2D4Q7Z3S7 1137 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 UBE3BQ7Z3V4 1068 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 DHX40Q8IX18 779 aaKnown RBP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 SLF2Q8IX21 1173 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 C1orf131Q8NDD1 294 aaKnown RBP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 TRIM58Q8NG06 486 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 KCNG4Q8TDN1 519 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 ZFAND2BQ8WV99 257 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 MRPS27Q92552 414 aaKnown RBP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 ZNF516Q92618 1163 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 RILPL2Q969X0 211 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 XAGE2Q96GT9 111 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 CCDC114Q96M63 670 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 ALS2CR12Q96Q35 445 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 SPAG5Q96R06 1193 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 PANX2Q96RD6 677 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 NAPGQ99747 312 aaPredicted RBP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 XPO4Q9C0E2 1151 aaKnown RBP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 UBA5Q9GZZ9 404 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 IRAK4Q9NWZ3 460 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 HYPKQ9NX55 129 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 CWC25Q9NXE8 425 aaPredicted RBP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 IFNKQ9P0W0 207 aa6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 CORO1CQ9ULV4 474 aaPredicted RBP6.34□□□□□ -1.39
VTI1BP4-201ENST00000427516 TDRD9Q8NDG6 1382 aaKnown RBP6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 ZCCHC11Q5TAX3 1644 aaKnown RBP6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 UBN2Q6ZU65 1347 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 CFAP73A6NFT4 308 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 KIF3BO15066 747 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 PRC1O43663 620 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 HSF2BPO75031 334 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 RTN2O75298 545 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 VAMP4O75379 141 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 RTN3O95197 1032 aaPredicted RBP6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 GNAI2P04899 355 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 PAX7P23759 505 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 YY1P25490 414 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 KIF5BP33176 963 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 GCLCP48506 637 aaPredicted RBP6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 UBASH3AP57075 661 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 NLRP12P59046 1061 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 GNGT1P63211 74 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 TBC1D8BQ0IIM8 1120 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 NNTQ13423 1086 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 NFE2L2Q16236 605 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 DBN1Q16643 649 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 WASHC4Q2M389 1173 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 CFAP100Q494V2 611 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 NBPF14Q5TI25 921 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 FBXW10Q5XX13 1052 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 MSL1Q68DK7 614 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 ARMCX5Q6P1M9 558 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 CPLX2Q6PUV4 134 aaKnown RBP6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 CEP57Q86XR8 500 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 CNGA4Q8IV77 575 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 KAT2BQ92831 832 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 PPP1R14BQ96C90 147 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 SPDL1Q96EA4 605 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 BICD1Q96G01 975 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 CTAGE1Q96RT6 745 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 CARD14Q9BXL6 1004 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 IQCGQ9H095 443 aaKnown RBP6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 IL21Q9HBE4 155 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 SLC24A3Q9HC58 644 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 RGL1Q9NZL6 768 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 STK26Q9P289 416 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 TFIP11Q9UBB9 837 aaKnown RBP6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 SNX14Q9Y5W7 946 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 TUBGCP6Q96RT7 1819 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 SYCP2Q9BX26 1530 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 PXDNLA1KZ92 1463 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 COL3A1P02461 1466 aaPredicted RBP6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 ATP7BP35670 1465 aa6.33□□□□□ -1.4
VTI1BP4-201ENST00000427516 VWA3AA6NCI4 1184 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 NR1I2O75469 434 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 RASSF9O75901 435 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 FLOT1O75955 427 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 SLC3A2P08195 630 aaKnown RBP6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 GSTA1P08263 222 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 GHRP10912 638 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 DNAJB2P25686 324 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 ABCD1P33897 745 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 PEX19P40855 299 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 CD151P48509 253 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 FANCCQ00597 558 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 RIPK1Q13546 671 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 CDC37Q16543 378 aaPredicted RBP6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 SPECC1LQ69YQ0 1117 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 EMBQ6PCB8 327 aa6.32□□□□□ -1.4
VTI1BP4-201ENST00000427516 GIGYF2Q6Y7W6 1299 aaKnown RBP6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms