RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 TAF7LQ5H9L4 462 aa11.67□□□□□ -0.54
LSG1-202ENST00000427461 VPS37DQ86XT2 251 aa11.67□□□□□ -0.54
LSG1-202ENST00000427461 IL27Q8NEV9 243 aa11.67□□□□□ -0.54
LSG1-202ENST00000427461 ASCC2Q9H1I8 757 aaPredicted RBP11.67□□□□□ -0.54
LSG1-202ENST00000427461 TRIM43BA6NCK2 446 aa11.66□□□□□ -0.54
LSG1-202ENST00000427461 ITGB8P26012 769 aa11.66□□□□□ -0.54
LSG1-202ENST00000427461 DIXDC1Q155Q3 683 aa11.66□□□□□ -0.54
LSG1-202ENST00000427461 CCDC57Q2TAC2 916 aa11.66□□□□□ -0.54
LSG1-202ENST00000427461 SH3BP5LQ7L8J4 393 aa11.66□□□□□ -0.54
LSG1-202ENST00000427461 TRIM43Q96BQ3 446 aaPredicted RBP11.66□□□□□ -0.54
LSG1-202ENST00000427461 GAS2L1Q99501 681 aaPredicted RBP11.66□□□□□ -0.54
LSG1-202ENST00000427461 PRDM12Q9H4Q4 367 aa11.66□□□□□ -0.54
LSG1-202ENST00000427461 PDLIM7Q9NR12 457 aa11.66□□□□□ -0.54
LSG1-202ENST00000427461 LRRFIP2Q9Y608 721 aaKnown RBP11.66□□□□□ -0.54
LSG1-202ENST00000427461 LOC285556D6RIA3 1793 aa11.66□□□□□ -0.54
LSG1-202ENST00000427461 BMP1P13497 986 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 SPP2Q13103 211 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 ADGRE1Q14246 886 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 TRIM60Q495X7 471 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 GJC2Q5T442 439 aaPredicted RBP11.65□□□□□ -0.54
LSG1-202ENST00000427461 SLC39A5Q6ZMH5 540 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 SOCS4Q8WXH5 440 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 USP6NLQ92738 828 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 TIFAQ96CG3 184 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 MYH16Q9H6N6 1097 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 TXNRD2Q9NNW7 524 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 USP40Q9NVE5 1235 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 MORF4L1Q9UBU8 362 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 PIEZO1Q92508 2521 aa11.65□□□□□ -0.54
LSG1-202ENST00000427461 MAST3O60307 1309 aa11.64□□□□□ -0.55
LSG1-202ENST00000427461 MYO9BQ13459 2157 aa11.64□□□□□ -0.55
LSG1-202ENST00000427461 MUC6Q6W4X9 2439 aa11.64□□□□□ -0.55
LSG1-202ENST00000427461 CTNND1O60716 968 aaKnown RBP11.64□□□□□ -0.55
LSG1-202ENST00000427461 HMGCS2P54868 508 aa11.64□□□□□ -0.55
LSG1-202ENST00000427461 TFF2Q03403 129 aa11.64□□□□□ -0.55
LSG1-202ENST00000427461 TMEM31Q5JXX7 168 aa11.64□□□□□ -0.55
LSG1-202ENST00000427461 AKNAD1Q5T1N1 836 aa11.64□□□□□ -0.55
LSG1-202ENST00000427461 PROCA1Q8NCQ7 364 aaPredicted RBP11.64□□□□□ -0.55
LSG1-202ENST00000427461 FLRT1Q9NZU1 646 aa11.64□□□□□ -0.55
LSG1-202ENST00000427461 PLXNA1Q9UIW2 1896 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.63□□□□□ -0.55
LSG1-202ENST00000427461 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.63□□□□□ -0.55
LSG1-202ENST00000427461 FAM86C2PA6NEL3 165 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 DDTLA6NHG4 134 aaPredicted RBP11.63□□□□□ -0.55
LSG1-202ENST00000427461 DNM1LO00429 736 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 IGFBP4P22692 258 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 CNGA1P29973 690 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 PBX2P40425 430 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 RGS3P49796 1198 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 MRE11P49959 708 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 KCNQ1P51787 676 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 Q3C1V9 767 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 ZSCAN29Q8IWY8 852 aaPredicted RBP11.63□□□□□ -0.55
LSG1-202ENST00000427461 TRMT44Q8IYL2 757 aaKnown RBP11.63□□□□□ -0.55
LSG1-202ENST00000427461 LPAR1Q92633 364 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 KHSRPQ92945 711 aaKnown RBP eCLIP11.63□□□□□ -0.55
LSG1-202ENST00000427461 RUNDC1Q96C34 613 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 PORCNQ9H237 461 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 C11orf16Q9NQ32 467 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 SPINK5Q9NQ38 1064 aaPredicted RBP11.63□□□□□ -0.55
LSG1-202ENST00000427461 IFT57Q9NWB7 429 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 DDX20Q9UHI6 824 aaKnown RBP11.63□□□□□ -0.55
LSG1-202ENST00000427461 CHD9Q3L8U1 2897 aa11.63□□□□□ -0.55
LSG1-202ENST00000427461 FAM196BA6NMK8 535 aa11.62□□□□□ -0.55
LSG1-202ENST00000427461 GRXCR1A8MXD5 290 aa11.62□□□□□ -0.55
LSG1-202ENST00000427461 RGS2P41220 211 aa11.62□□□□□ -0.55
LSG1-202ENST00000427461 GNAI1P63096 354 aa11.62□□□□□ -0.55
LSG1-202ENST00000427461 MAP3K10Q02779 954 aa11.62□□□□□ -0.55
LSG1-202ENST00000427461 CAVIN4Q5BKX8 364 aa11.62□□□□□ -0.55
LSG1-202ENST00000427461 MORN1Q5T089 497 aa11.62□□□□□ -0.55
LSG1-202ENST00000427461 ANO1Q5XXA6 986 aa11.62□□□□□ -0.55
LSG1-202ENST00000427461 LINS1Q8NG48 757 aa11.62□□□□□ -0.55
LSG1-202ENST00000427461 DNAAF4Q8WXU2 420 aa11.62□□□□□ -0.55
LSG1-202ENST00000427461 P2RX7Q99572 595 aaKnown RBP11.62□□□□□ -0.55
LSG1-202ENST00000427461 SUGT1Q9Y2Z0 365 aa11.62□□□□□ -0.55
LSG1-202ENST00000427461 MYH13Q9UKX3 1938 aa11.61□□□□□ -0.55
LSG1-202ENST00000427461 PABPC4Q13310 644 aaKnown RBP eCLIP11.61□□□□□ -0.55
LSG1-202ENST00000427461 GPR142Q7Z601 462 aa11.61□□□□□ -0.55
LSG1-202ENST00000427461 TRPV1Q8NER1 839 aa11.61□□□□□ -0.55
LSG1-202ENST00000427461 GPRC5AQ8NFJ5 357 aa11.61□□□□□ -0.55
LSG1-202ENST00000427461 FERMT2Q96AC1 680 aa11.61□□□□□ -0.55
LSG1-202ENST00000427461 APBA2Q99767 749 aa11.61□□□□□ -0.55
LSG1-202ENST00000427461 STK31Q9BXU1 1019 aa11.61□□□□□ -0.55
LSG1-202ENST00000427461 NDUFB9Q9Y6M9 179 aa11.61□□□□□ -0.55
LSG1-202ENST00000427461 ATAD5Q96QE3 1844 aa11.6□□□□□ -0.55
LSG1-202ENST00000427461 PRDX5P30044 214 aa11.6□□□□□ -0.55
LSG1-202ENST00000427461 SNX17Q15036 470 aa11.6□□□□□ -0.55
LSG1-202ENST00000427461 LRRC24Q50LG9 513 aa11.6□□□□□ -0.55
LSG1-202ENST00000427461 ZNF280CQ8ND82 737 aa11.6□□□□□ -0.55
LSG1-202ENST00000427461 PBX4Q9BYU1 374 aa11.6□□□□□ -0.55
LSG1-202ENST00000427461 CXXC1Q9P0U4 656 aaPredicted RBP11.6□□□□□ -0.55
LSG1-202ENST00000427461 RBPJLQ9UBG7 517 aa11.6□□□□□ -0.55
LSG1-202ENST00000427461 CHD7Q9P2D1 2997 aa11.59□□□□□ -0.55
LSG1-202ENST00000427461 ENTPD3O75355 529 aa11.59□□□□□ -0.55
LSG1-202ENST00000427461 MAPK4P31152 587 aa11.59□□□□□ -0.55
LSG1-202ENST00000427461 CYP2C19P33261 490 aa11.59□□□□□ -0.55
LSG1-202ENST00000427461 ADCYAP1R1P41586 468 aa11.59□□□□□ -0.55
LSG1-202ENST00000427461 HERVK_113P62684 666 aa11.59□□□□□ -0.55
LSG1-202ENST00000427461 IRX3P78415 501 aaPredicted RBP11.59□□□□□ -0.55
LSG1-202ENST00000427461 TLE2Q04725 743 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms