RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 DCP1AQ9NPI6 582 aaPredicted RBP30.24■■■□□ 2.43
HERPUD2-205ENST00000427455 ATP8A2Q9NTI2 1148 aa30.24■■■□□ 2.43
HERPUD2-205ENST00000427455 PRKAB2O43741 272 aa30.23■■■□□ 2.43
HERPUD2-205ENST00000427455 SLURP2P0DP57 97 aa30.23■■■□□ 2.43
HERPUD2-205ENST00000427455 RILPL2Q969X0 211 aa30.23■■■□□ 2.43
HERPUD2-205ENST00000427455 OPTNQ96CV9 577 aa30.23■■■□□ 2.43
HERPUD2-205ENST00000427455 STRBPQ96SI9 672 aaKnown RBP30.23■■■□□ 2.43
HERPUD2-205ENST00000427455 SLC4A4Q9Y6R1 1079 aa30.23■■■□□ 2.43
HERPUD2-205ENST00000427455 DOCK1Q14185 1865 aa30.23■■■□□ 2.43
HERPUD2-205ENST00000427455 SPDYE5A6NIY4 337 aa30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 FAM196BA6NMK8 535 aa30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 M0R2C6 588 aa30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 GPAA1O43292 621 aa30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 MKRN3Q13064 507 aaKnown RBP30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 SLC4A8Q2Y0W8 1093 aa30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 TTC6Q86TZ1 520 aa30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 METTL16Q86W50 562 aaKnown RBP30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 FOXP4Q8IVH2 680 aaPredicted RBP30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 REM2Q8IYK8 340 aaPredicted RBP30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 CRACR2BQ8N4Y2 399 aaPredicted RBP30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 TRIM34Q9BYJ4 488 aa30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 MCM9Q9NXL9 1143 aa30.22■■■□□ 2.43
HERPUD2-205ENST00000427455 ERICH6BQ5W0A0 696 aa30.21■■■□□ 2.43
HERPUD2-205ENST00000427455 ERO1BQ86YB8 467 aa30.21■■■□□ 2.43
HERPUD2-205ENST00000427455 DDRGK1Q96HY6 314 aa30.21■■■□□ 2.43
HERPUD2-205ENST00000427455 EHD4Q9H223 541 aa30.21■■■□□ 2.43
HERPUD2-205ENST00000427455 GJA5P36382 358 aa30.2■■■□□ 2.43
HERPUD2-205ENST00000427455 TTC22Q5TAA0 569 aa30.2■■■□□ 2.43
HERPUD2-205ENST00000427455 WBP1LQ9NX94 342 aa30.2■■■□□ 2.43
HERPUD2-205ENST00000427455 CTNND1O60716 968 aaKnown RBP30.19■■■□□ 2.42
HERPUD2-205ENST00000427455 POLR3DP05423 398 aaPredicted RBP30.19■■■□□ 2.42
HERPUD2-205ENST00000427455 GNAT2P19087 354 aa30.19■■■□□ 2.42
HERPUD2-205ENST00000427455 SCYL3Q8IZE3 742 aa30.19■■■□□ 2.42
HERPUD2-205ENST00000427455 CNKSR2Q8WXI2 1034 aa30.19■■■□□ 2.42
HERPUD2-205ENST00000427455 OTUD5Q96G74 571 aa30.19■■■□□ 2.42
HERPUD2-205ENST00000427455 SEC62Q99442 399 aaKnown RBP30.19■■■□□ 2.42
HERPUD2-205ENST00000427455 DNAJC18Q9H819 358 aa30.19■■■□□ 2.42
HERPUD2-205ENST00000427455 BAZ2AQ9UIF9 1905 aaKnown RBP30.19■■■□□ 2.42
HERPUD2-205ENST00000427455 HSPA1AP0DMV8 641 aaKnown RBP30.18■■■□□ 2.42
HERPUD2-205ENST00000427455 HSPA1BP0DMV9 641 aaKnown RBP30.18■■■□□ 2.42
HERPUD2-205ENST00000427455 SREBF2Q12772 1141 aa30.18■■■□□ 2.42
HERPUD2-205ENST00000427455 SERPINB13Q9UIV8 391 aa30.18■■■□□ 2.42
HERPUD2-205ENST00000427455 BEGAINQ9BUH8 593 aa30.17■■■□□ 2.42
HERPUD2-205ENST00000427455 PICK1Q9NRD5 415 aa30.17■■■□□ 2.42
HERPUD2-205ENST00000427455 MANSC4A6NHS7 340 aaPredicted RBP30.16■■■□□ 2.42
HERPUD2-205ENST00000427455 GSPT1P15170 499 aaKnown RBP30.16■■■□□ 2.42
HERPUD2-205ENST00000427455 PLCD1P51178 756 aa30.16■■■□□ 2.42
HERPUD2-205ENST00000427455 PPATQ06203 517 aa30.16■■■□□ 2.42
HERPUD2-205ENST00000427455 PPIL2Q13356 520 aa30.16■■■□□ 2.42
HERPUD2-205ENST00000427455 GIMAP6Q6P9H5 292 aa30.16■■■□□ 2.42
HERPUD2-205ENST00000427455 AMOTL1Q8IY63 956 aa30.16■■■□□ 2.42
HERPUD2-205ENST00000427455 HELLSQ9NRZ9 838 aa30.16■■■□□ 2.42
HERPUD2-205ENST00000427455 ATAD5Q96QE3 1844 aa30.16■■■□□ 2.42
HERPUD2-205ENST00000427455 GSG1L2A8MUP6 293 aa30.15■■■□□ 2.42
HERPUD2-205ENST00000427455 SDSP20132 328 aa30.14■■■□□ 2.42
HERPUD2-205ENST00000427455 CAP2P40123 477 aa30.14■■■□□ 2.42
HERPUD2-205ENST00000427455 FAM227BQ96M60 508 aa30.14■■■□□ 2.42
HERPUD2-205ENST00000427455 ARPP21Q9UBL0 812 aaPredicted RBP30.14■■■□□ 2.42
HERPUD2-205ENST00000427455 TAOK2Q9UL54 1235 aa30.14■■■□□ 2.42
HERPUD2-205ENST00000427455 A0A0D9SFI3 127 aa30.13■■■□□ 2.41
HERPUD2-205ENST00000427455 TM4SF4P48230 202 aa30.13■■■□□ 2.41
HERPUD2-205ENST00000427455 USP17L12C9JPN9 530 aa30.12■■■□□ 2.41
HERPUD2-205ENST00000427455 USP17L21D6R901 530 aa30.12■■■□□ 2.41
HERPUD2-205ENST00000427455 HIP1O00291 1037 aa30.12■■■□□ 2.41
HERPUD2-205ENST00000427455 CA12O43570 354 aa30.12■■■□□ 2.41
HERPUD2-205ENST00000427455 CYP2D6P10635 497 aa30.12■■■□□ 2.41
HERPUD2-205ENST00000427455 PTPRAP18433 802 aa30.12■■■□□ 2.41
HERPUD2-205ENST00000427455 GTF2A2P52657 109 aa30.12■■■□□ 2.41
HERPUD2-205ENST00000427455 INHBEP58166 350 aa30.12■■■□□ 2.41
HERPUD2-205ENST00000427455 GABPAQ06546 454 aa30.12■■■□□ 2.41
HERPUD2-205ENST00000427455 NMIQ13287 307 aaPredicted RBP30.12■■■□□ 2.41
HERPUD2-205ENST00000427455 RRP1BQ14684 758 aaKnown RBP30.12■■■□□ 2.41
HERPUD2-205ENST00000427455 EPB41L4AQ9HCS5 686 aaPredicted RBP30.12■■■□□ 2.41
HERPUD2-205ENST00000427455 PATL2C9JE40 543 aaKnown RBP30.11■■■□□ 2.41
HERPUD2-205ENST00000427455 IRF6O14896 467 aa30.11■■■□□ 2.41
HERPUD2-205ENST00000427455 MCMDC2Q4G0Z9 681 aa30.11■■■□□ 2.41
HERPUD2-205ENST00000427455 C12orf60Q5U649 245 aa30.11■■■□□ 2.41
HERPUD2-205ENST00000427455 TATDN1Q6P1N9 297 aa30.11■■■□□ 2.41
HERPUD2-205ENST00000427455 CCDC129Q6ZRS4 1044 aa30.11■■■□□ 2.41
HERPUD2-205ENST00000427455 DIAPH3Q9NSV4 1193 aa30.11■■■□□ 2.41
HERPUD2-205ENST00000427455 PPP4R2Q9NY27 417 aa30.11■■■□□ 2.41
HERPUD2-205ENST00000427455 APPP05067 770 aa30.1■■■□□ 2.41
HERPUD2-205ENST00000427455 EVX2Q03828 476 aa30.1■■■□□ 2.41
HERPUD2-205ENST00000427455 CTR9Q6PD62 1173 aa30.1■■■□□ 2.41
HERPUD2-205ENST00000427455 MS4A4AQ96JQ5 239 aa30.1■■■□□ 2.41
HERPUD2-205ENST00000427455 NACAP1Q9BZK3 213 aa30.1■■■□□ 2.41
HERPUD2-205ENST00000427455 GINM1Q9NU53 330 aa30.1■■■□□ 2.41
HERPUD2-205ENST00000427455 PHIPQ8WWQ0 1821 aa30.1■■■□□ 2.41
HERPUD2-205ENST00000427455 TESPA1A2RU30 521 aaPredicted RBP30.09■■■□□ 2.41
HERPUD2-205ENST00000427455 SHMT1P34896 483 aa30.09■■■□□ 2.41
HERPUD2-205ENST00000427455 TDO2P48775 406 aa30.09■■■□□ 2.41
HERPUD2-205ENST00000427455 SNAPC2Q13487 334 aa30.09■■■□□ 2.41
HERPUD2-205ENST00000427455 SBK1Q52WX2 424 aa30.09■■■□□ 2.41
HERPUD2-205ENST00000427455 SAGE1Q9NXZ1 904 aa30.09■■■□□ 2.41
HERPUD2-205ENST00000427455 SWAP70Q9UH65 585 aa30.09■■■□□ 2.41
HERPUD2-205ENST00000427455 KCNH4Q9UQ05 1017 aa30.09■■■□□ 2.41
HERPUD2-205ENST00000427455 ZHX2Q9Y6X8 837 aa30.09■■■□□ 2.41
HERPUD2-205ENST00000427455 CYP2D7A0A087X1C5 515 aa30.08■■■□□ 2.41
HERPUD2-205ENST00000427455 FOXN1O15353 648 aa30.08■■■□□ 2.41
HERPUD2-205ENST00000427455 ASNSP08243 561 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms