RNA–Protein interactions for RNA: ENST00000427391.2

FIRRE-201, Transcript of firre intergenic repeating RNA element, humanhuman

TSL 2 BASIC

Gene FIRRE, Length 2,926 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FIRRE-201ENST00000427391 ANKRD18AQ8IVF6 992 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 SHISA4Q96DD7 197 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 PRIMPOLQ96LW4 560 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 KRT23Q9C075 422 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 TRMT1Q9NXH9 659 aaKnown RBP13.43□□□□□ -0.26
FIRRE-201ENST00000427391 TFCP2L1Q9NZI6 479 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 IFNKQ9P0W0 207 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 DOCK2Q92608 1830 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 WNK3Q9BYP7 1800 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 MAGEB6P1A0A0J9YX57 407 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 U2AF2P26368 475 aaKnown RBP eCLIP13.43□□□□□ -0.262e-7■■■□□ 17.1
FIRRE-201ENST00000427391 LONRF3Q496Y0 759 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 HSP90AA4PQ58FG1 418 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 XPO4Q9C0E2 1151 aaKnown RBP13.43□□□□□ -0.26
FIRRE-201ENST00000427391 MINPP1Q9UNW1 487 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 BCL9LQ86UU0 1499 aa13.43□□□□□ -0.26
FIRRE-201ENST00000427391 PNPLA7Q6ZV29 1317 aa13.42□□□□□ -0.26
FIRRE-201ENST00000427391 IFNAR1P17181 557 aa13.42□□□□□ -0.26
FIRRE-201ENST00000427391 AMIGO3Q86WK7 504 aa13.42□□□□□ -0.26
FIRRE-201ENST00000427391 ZNF654Q8IZM8 581 aa13.42□□□□□ -0.26
FIRRE-201ENST00000427391 CDC5LQ99459 802 aaKnown RBP13.42□□□□□ -0.26
FIRRE-201ENST00000427391 CNNM2Q9H8M5 875 aa13.42□□□□□ -0.26
FIRRE-201ENST00000427391 SKILP12757 684 aa13.42□□□□□ -0.26
FIRRE-201ENST00000427391 CDC25BP30305 580 aa13.42□□□□□ -0.26
FIRRE-201ENST00000427391 PAXIP1Q6ZW49 1069 aaPredicted RBP13.42□□□□□ -0.26
FIRRE-201ENST00000427391 FOXP4Q8IVH2 680 aaPredicted RBP13.42□□□□□ -0.26
FIRRE-201ENST00000427391 NOSTRINQ8IVI9 506 aa13.42□□□□□ -0.26
FIRRE-201ENST00000427391 FAM84BQ96KN1 310 aaPredicted RBP13.42□□□□□ -0.26
FIRRE-201ENST00000427391 CDCA7Q9BWT1 371 aaPredicted RBP13.42□□□□□ -0.26
FIRRE-201ENST00000427391 NAT10Q9H0A0 1025 aaKnown RBP13.42□□□□□ -0.26
FIRRE-201ENST00000427391 PDCL3Q9H2J4 239 aa13.42□□□□□ -0.26
FIRRE-201ENST00000427391 TNKSO95271 1327 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 BAZ2AQ9UIF9 1905 aaKnown RBP13.41□□□□□ -0.26
FIRRE-201ENST00000427391 NLRP12P59046 1061 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 NCAPHQ15003 741 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 TPD52L1Q16890 204 aaPredicted RBP13.41□□□□□ -0.26
FIRRE-201ENST00000427391 GRAMD1CQ8IYS0 662 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 ZNF592Q92610 1267 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 RIOK1Q9BRS2 568 aaKnown RBP13.41□□□□□ -0.26
FIRRE-201ENST00000427391 UBAC1Q9BSL1 405 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 BCL2L12Q9HB09 334 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 HPSEQ9Y251 543 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 PCDHB6Q9Y5E3 794 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 MMP1P03956 469 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 TNNT1P13805 278 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 CHAF1AQ13111 956 aaPredicted RBP13.41□□□□□ -0.26
FIRRE-201ENST00000427391 USP49Q70CQ1 688 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 METTL16Q86W50 562 aaKnown RBP13.41□□□□□ -0.26
FIRRE-201ENST00000427391 CRACR2BQ8N4Y2 399 aaPredicted RBP13.41□□□□□ -0.26
FIRRE-201ENST00000427391 PDILTQ8N807 584 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 FANCBQ8NB91 859 aa13.41□□□□□ -0.26
FIRRE-201ENST00000427391 CICQ96RK0 1608 aaPredicted RBP13.41□□□□□ -0.26
FIRRE-201ENST00000427391 MYH2Q9UKX2 1941 aa13.4□□□□□ -0.26
FIRRE-201ENST00000427391 ERICH2A1L162 156 aa13.4□□□□□ -0.26
FIRRE-201ENST00000427391 NMT2O60551 498 aa13.4□□□□□ -0.26
FIRRE-201ENST00000427391 CCZ1BP86790 482 aa13.4□□□□□ -0.26
FIRRE-201ENST00000427391 CCZ1P86791 482 aaPredicted RBP13.4□□□□□ -0.26
FIRRE-201ENST00000427391 NAA30Q147X3 362 aaPredicted RBP13.4□□□□□ -0.26
FIRRE-201ENST00000427391 SART3Q15020 963 aaKnown RBP13.4□□□□□ -0.26
FIRRE-201ENST00000427391 NOM1Q5C9Z4 860 aaKnown RBP13.4□□□□□ -0.26
FIRRE-201ENST00000427391 TMC6Q7Z403 805 aa13.4□□□□□ -0.26
FIRRE-201ENST00000427391 VPS54Q9P1Q0 977 aa13.4□□□□□ -0.26
FIRRE-201ENST00000427391 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
FIRRE-201ENST00000427391 THRAP3Q9Y2W1 955 aaKnown RBP13.4□□□□□ -0.26
FIRRE-201ENST00000427391 ZNF804BA4D1E1 1349 aa13.4□□□□□ -0.26
FIRRE-201ENST00000427391 GNAT2P19087 354 aa13.4□□□□□ -0.26
FIRRE-201ENST00000427391 EARS2Q5JPH6 523 aaKnown RBP13.4□□□□□ -0.26
FIRRE-201ENST00000427391 RESP18Q5W5W9 173 aa13.4□□□□□ -0.26
FIRRE-201ENST00000427391 TXNRD3Q86VQ6 643 aa13.4□□□□□ -0.26
FIRRE-201ENST00000427391 HSD3B7Q9H2F3 369 aa13.4□□□□□ -0.26
FIRRE-201ENST00000427391 AHDC1Q5TGY3 1603 aaPredicted RBP13.4□□□□□ -0.26
FIRRE-201ENST00000427391 PPP6R2O75170 966 aa13.4□□□□□ -0.27
FIRRE-201ENST00000427391 PLEKHA8P1O95397 391 aa13.4□□□□□ -0.27
FIRRE-201ENST00000427391 ZNF827Q17R98 1081 aa13.4□□□□□ -0.27
FIRRE-201ENST00000427391 TRIM22Q8IYM9 498 aa13.4□□□□□ -0.27
FIRRE-201ENST00000427391 ENAHQ8N8S7 591 aaPredicted RBP13.4□□□□□ -0.27
FIRRE-201ENST00000427391 DPF2Q92785 391 aa13.4□□□□□ -0.27
FIRRE-201ENST00000427391 KCNH3Q9ULD8 1083 aa13.4□□□□□ -0.27
FIRRE-201ENST00000427391 COL22A1Q8NFW1 1626 aaPredicted RBP13.39□□□□□ -0.27
FIRRE-201ENST00000427391 RTL9Q8NET4 1388 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 CYP2D6P10635 497 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 GOLGA8FQ08AF8 430 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 GOLGA8DPQ0D2H9 430 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 SEC23AQ15436 765 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 CABP5Q9NP86 173 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 USP17L12C9JPN9 530 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 USP17L21D6R901 530 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 WNT7AO00755 349 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 PRR29P0C7W0 189 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 BMP6P22004 513 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 PRDX5P30044 214 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 PDE4BQ07343 736 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 BSDC1Q9NW68 430 aaPredicted RBP13.39□□□□□ -0.27
FIRRE-201ENST00000427391 AATFQ9NY61 560 aaKnown RBP eCLIP13.39□□□□□ -0.27
FIRRE-201ENST00000427391 PCDHA5Q9Y5H7 936 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 UTRNP46939 3433 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 BCORQ6W2J9 1755 aa13.39□□□□□ -0.27
FIRRE-201ENST00000427391 NRAPQ86VF7 1730 aa13.38□□□□□ -0.27
FIRRE-201ENST00000427391 CAVIN4Q5BKX8 364 aa13.38□□□□□ -0.27
FIRRE-201ENST00000427391 FAM47AQ5JRC9 791 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms