RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 CD46P15529 392 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 GCGRP47871 477 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 HDLBPQ00341 1268 aaKnown RBP9.04□□□□□ -0.96
LINC01049-201ENST00000426840 FUT2Q10981 343 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 ERICH6BQ5W0A0 696 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 OGFOD1Q8N543 542 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 MTMR14Q8NCE2 650 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 NKX2-3Q8TAU0 364 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 ZNF384Q8TF68 577 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 PRMT6Q96LA8 375 aaPredicted RBP9.04□□□□□ -0.96
LINC01049-201ENST00000426840 LNPKQ9C0E8 428 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 BOLA2Q9H3K6 86 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 ANTXR1Q9H6X2 564 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 PIH1D3Q9NQM4 214 aaKnown RBP9.04□□□□□ -0.96
LINC01049-201ENST00000426840 ECHDC1Q9NTX5 307 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 FAM217BQ9NTX9 383 aaPredicted RBP9.04□□□□□ -0.96
LINC01049-201ENST00000426840 ABCF2Q9UG63 623 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 STAP2Q9UGK3 403 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 HDAC9Q9UKV0 1011 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 PCDHAC2Q9Y5I4 1007 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 NDUFB9Q9Y6M9 179 aa9.04□□□□□ -0.96
LINC01049-201ENST00000426840 WNT10BO00744 389 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 TOMM70O94826 608 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 LDHBP07195 334 aaKnown RBP9.03□□□□□ -0.96
LINC01049-201ENST00000426840 CRKP46108 304 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 AMHR2Q16671 573 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 KIF4BQ2VIQ3 1234 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 NBPF9Q3BBW0 867 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 CFAP100Q494V2 611 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 EAPPQ56P03 285 aaPredicted RBP9.03□□□□□ -0.96
LINC01049-201ENST00000426840 SPTY2D1Q68D10 685 aaPredicted RBP9.03□□□□□ -0.96
LINC01049-201ENST00000426840 HHIPL2Q6UWX4 724 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 ERICH6Q7L0X2 663 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 ZGPATQ8N5A5 531 aaKnown RBP9.03□□□□□ -0.96
LINC01049-201ENST00000426840 PI4K2BQ8TCG2 481 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 EDC3Q96F86 508 aaKnown RBP9.03□□□□□ -0.96
LINC01049-201ENST00000426840 HAUS7Q99871 368 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 TMUB1Q9BVT8 246 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 SERPINA10Q9UK55 444 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 MYH13Q9UKX3 1938 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 ASTN2O75129 1339 aaPredicted RBP9.03□□□□□ -0.96
LINC01049-201ENST00000426840 TTC41PQ6P2S7 1318 aa9.03□□□□□ -0.96
LINC01049-201ENST00000426840 POLR2AP24928 1970 aaKnown RBP9.03□□□□□ -0.96
LINC01049-201ENST00000426840 TLL1O43897 1013 aa9.02□□□□□ -0.97
LINC01049-201ENST00000426840 SSTR3P32745 418 aaPredicted RBP9.02□□□□□ -0.97
LINC01049-201ENST00000426840 PDE1AP54750 535 aa9.02□□□□□ -0.97
LINC01049-201ENST00000426840 MECOMQ03112 1051 aa9.02□□□□□ -0.97
LINC01049-201ENST00000426840 DLGAP5Q15398 846 aa9.02□□□□□ -0.97
LINC01049-201ENST00000426840 TSHZ3Q63HK5 1081 aa9.02□□□□□ -0.97
LINC01049-201ENST00000426840 LDHDQ86WU2 507 aa9.02□□□□□ -0.97
LINC01049-201ENST00000426840 PLEKHM2Q8IWE5 1019 aa9.02□□□□□ -0.97
LINC01049-201ENST00000426840 PARP9Q8IXQ6 854 aa9.02□□□□□ -0.97
LINC01049-201ENST00000426840 NSUN4Q96CB9 384 aaKnown RBP9.02□□□□□ -0.97
LINC01049-201ENST00000426840 AOX1Q06278 1338 aa9.02□□□□□ -0.97
LINC01049-201ENST00000426840 IGSF3O75054 1194 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 MX1P20591 662 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 PDE4DQ08499 809 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 DIXDC1Q155Q3 683 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 APOBEC3HQ6NTF7 200 aaKnown RBP9.01□□□□□ -0.97
LINC01049-201ENST00000426840 CENPQQ7L2Z9 268 aaPredicted RBP9.01□□□□□ -0.97
LINC01049-201ENST00000426840 TEKT1Q969V4 418 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 ZDHHC15Q96MV8 337 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 DNAJC2Q99543 621 aaKnown RBP9.01□□□□□ -0.97
LINC01049-201ENST00000426840 OSBPL3Q9H4L5 887 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 TDRD3Q9H7E2 651 aaKnown RBP9.01□□□□□ -0.97
LINC01049-201ENST00000426840 PPP4R2Q9NY27 417 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 RAI14Q9P0K7 980 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 LRP2BPQ9P2M1 347 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 DAGLAQ9Y4D2 1042 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 MYO5AQ9Y4I1 1855 aaKnown RBP9.01□□□□□ -0.97
LINC01049-201ENST00000426840 ADAMTSL1Q8N6G6 1762 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 MAST3O60307 1309 aa9.01□□□□□ -0.97
LINC01049-201ENST00000426840 GPR75-ASB3A0A0A6YYF3 556 aa9□□□□□ -0.97
LINC01049-201ENST00000426840 GOLIM4O00461 696 aa9□□□□□ -0.97
LINC01049-201ENST00000426840 ERC2O15083 957 aa9□□□□□ -0.97
LINC01049-201ENST00000426840 GLRX3O76003 335 aaKnown RBP9□□□□□ -0.97
LINC01049-201ENST00000426840 LDHCP07864 332 aa9□□□□□ -0.97
LINC01049-201ENST00000426840 RBM5P52756 815 aaKnown RBP eCLIP9□□□□□ -0.97
LINC01049-201ENST00000426840 TTF1Q15361 905 aaPredicted RBP9□□□□□ -0.97
LINC01049-201ENST00000426840 IFFO2Q5TF58 517 aa9□□□□□ -0.97
LINC01049-201ENST00000426840 MAP1SQ66K74 1059 aaPredicted RBP9□□□□□ -0.97
LINC01049-201ENST00000426840 CNTROBQ8N137 903 aa9□□□□□ -0.97
LINC01049-201ENST00000426840 SMC1BQ8NDV3 1235 aa9□□□□□ -0.97
LINC01049-201ENST00000426840 GPATCH3Q96I76 525 aa9□□□□□ -0.97
LINC01049-201ENST00000426840 CCDC136Q96JN2 1154 aa9□□□□□ -0.97
LINC01049-201ENST00000426840 PAG1Q9NWQ8 432 aa9□□□□□ -0.97
LINC01049-201ENST00000426840 ZNF70Q9UC06 446 aaPredicted RBP9□□□□□ -0.97
LINC01049-201ENST00000426840 GAKO14976 1311 aa9□□□□□ -0.97
LINC01049-201ENST00000426840 NR1I2O75469 434 aa8.99□□□□□ -0.97
LINC01049-201ENST00000426840 IDH1O75874 414 aaKnown RBP8.99□□□□□ -0.97
LINC01049-201ENST00000426840 MAP4K4O95819 1239 aaPredicted RBP8.99□□□□□ -0.97
LINC01049-201ENST00000426840 GSTO1P78417 241 aa8.99□□□□□ -0.97
LINC01049-201ENST00000426840 FMR1Q06787 632 aaKnown RBP eCLIP8.99□□□□□ -0.97
LINC01049-201ENST00000426840 FSTL1Q12841 308 aa8.99□□□□□ -0.97
LINC01049-201ENST00000426840 ANGEL2Q5VTE6 544 aaKnown RBP8.99□□□□□ -0.97
LINC01049-201ENST00000426840 CDC42EP5Q6NZY7 148 aa8.99□□□□□ -0.97
LINC01049-201ENST00000426840 DLK2Q6UY11 383 aa8.99□□□□□ -0.97
LINC01049-201ENST00000426840 CDC37L1Q7L3B6 337 aa8.99□□□□□ -0.97
LINC01049-201ENST00000426840 ADGRA1Q86SQ6 560 aa8.99□□□□□ -0.97
LINC01049-201ENST00000426840 USP48Q86UV5 1035 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms