RNA–Protein interactions for RNA: ENST00000424543.2

TRBV22-1-201, Transcript of T cell receptor beta variable 22-1 (pseudogene), humanhuman

BASIC

Gene TRBV22-1, Length 337 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV22-1-201ENST00000424543 G3BP1Q13283 466 aaKnown RBP eCLIP14.39□□□□□ -0.11
TRBV22-1-201ENST00000424543 TEX11Q8IYF3 940 aa14.39□□□□□ -0.11
TRBV22-1-201ENST00000424543 ANKRD13CQ8N6S4 541 aa14.39□□□□□ -0.11
TRBV22-1-201ENST00000424543 GCC1Q96CN9 775 aa14.39□□□□□ -0.11
TRBV22-1-201ENST00000424543 TLR7Q9NYK1 1049 aaKnown RBP14.39□□□□□ -0.11
TRBV22-1-201ENST00000424543 TAOK2Q9UL54 1235 aa14.39□□□□□ -0.11
TRBV22-1-201ENST00000424543 HOXD10P28358 340 aa14.38□□□□□ -0.11
TRBV22-1-201ENST00000424543 JAG1P78504 1218 aa14.38□□□□□ -0.11
TRBV22-1-201ENST00000424543 SPP2Q13103 211 aa14.38□□□□□ -0.11
TRBV22-1-201ENST00000424543 FASTKD5Q7L8L6 764 aaKnown RBP14.38□□□□□ -0.11
TRBV22-1-201ENST00000424543 SMCR8Q8TEV9 937 aaPredicted RBP14.38□□□□□ -0.11
TRBV22-1-201ENST00000424543 RNF208Q9H0X6 261 aa14.38□□□□□ -0.11
TRBV22-1-201ENST00000424543 AATFQ9NY61 560 aaKnown RBP eCLIP14.38□□□□□ -0.11
TRBV22-1-201ENST00000424543 LRP2BPQ9P2M1 347 aa14.38□□□□□ -0.11
TRBV22-1-201ENST00000424543 NDUFB9Q9Y6M9 179 aa14.38□□□□□ -0.11
TRBV22-1-201ENST00000424543 IPO8O15397 1037 aaKnown RBP14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 RLBP1P12271 317 aa14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 FLT3LGP49771 235 aa14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 FXR1P51114 621 aaKnown RBP eCLIP14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 HMGCS2P54868 508 aa14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 GSTO1P78417 241 aa14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 OS9Q13438 667 aaPredicted RBP14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 TNNI3KQ59H18 835 aa14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 TTC39AQ5SRH9 613 aa14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 MAPKAPK5Q8IW41 473 aa14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 PIH1D3Q9NQM4 214 aaKnown RBP14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 PCDH10Q9P2E7 1040 aa14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 AGTPBP1Q9UPW5 1226 aa14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 FPGT-TNNI3KV9GXZ4 949 aa14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 COL2A1P02458 1487 aaPredicted RBP14.37□□□□□ -0.11
TRBV22-1-201ENST00000424543 TNPO2O14787 897 aaKnown RBP14.36□□□□□ -0.11
TRBV22-1-201ENST00000424543 ADCY3O60266 1144 aa14.36□□□□□ -0.11
TRBV22-1-201ENST00000424543 INHAP05111 366 aa14.36□□□□□ -0.11
TRBV22-1-201ENST00000424543 POLA2Q14181 598 aa14.36□□□□□ -0.11
TRBV22-1-201ENST00000424543 ZKSCAN2Q63HK3 967 aa14.36□□□□□ -0.11
TRBV22-1-201ENST00000424543 NAA16Q6N069 864 aaPredicted RBP14.36□□□□□ -0.11
TRBV22-1-201ENST00000424543 DPF3Q92784 378 aa14.36□□□□□ -0.11
TRBV22-1-201ENST00000424543 DNAJC18Q9H819 358 aa14.36□□□□□ -0.11
TRBV22-1-201ENST00000424543 SAP30BPQ9UHR5 308 aaKnown RBP14.36□□□□□ -0.11
TRBV22-1-201ENST00000424543 TBC1D12O60347 775 aa14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 SURF6O75683 361 aaKnown RBP14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 GDF11O95390 407 aa14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 CYP2E1P05181 493 aaPredicted RBP14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 LDHCP07864 332 aa14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 UQCRFS1P1P0C7P4 283 aa14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 CAP2P40123 477 aa14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 ZAP70P43403 619 aa14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 GJA8P48165 433 aa14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 DYNLL1P63167 89 aaKnown RBP14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 CHRDL2Q6WN34 429 aa14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 SLAIN1Q8ND83 568 aa14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 TGFBRAP1Q8WUH2 860 aa14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 CCDC8Q9H0W5 538 aaPredicted RBP14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 NAV1Q8NEY1 1877 aa14.35□□□□□ -0.11
TRBV22-1-201ENST00000424543 GJB1P08034 283 aa14.34□□□□□ -0.11
TRBV22-1-201ENST00000424543 UBXN2AP68543 259 aa14.34□□□□□ -0.11
TRBV22-1-201ENST00000424543 HNRNPUQ00839 825 aaKnown RBP eCLIP14.34□□□□□ -0.11
TRBV22-1-201ENST00000424543 UBE2Q1Q7Z7E8 422 aa14.34□□□□□ -0.11
TRBV22-1-201ENST00000424543 ITPRIPQ8IWB1 547 aa14.34□□□□□ -0.11
TRBV22-1-201ENST00000424543 ZNF280CQ8ND82 737 aa14.34□□□□□ -0.11
TRBV22-1-201ENST00000424543 SSH3Q8TE77 659 aa14.34□□□□□ -0.11
TRBV22-1-201ENST00000424543 U2AF1L4Q8WU68 220 aaKnown RBP14.34□□□□□ -0.11
TRBV22-1-201ENST00000424543 DBNLQ9UJU6 430 aaKnown RBP14.34□□□□□ -0.11
TRBV22-1-201ENST00000424543 PALD1Q9ULE6 856 aa14.34□□□□□ -0.11
TRBV22-1-201ENST00000424543 SLC45A1Q9Y2W3 748 aa14.34□□□□□ -0.11
TRBV22-1-201ENST00000424543 FLT1P17948 1338 aa14.34□□□□□ -0.11
TRBV22-1-201ENST00000424543 LAMA3Q16787 3333 aa14.33□□□□□ -0.11
TRBV22-1-201ENST00000424543 DDX60LQ5H9U9 1706 aaKnown RBP14.33□□□□□ -0.12
TRBV22-1-201ENST00000424543 NPM3O75607 178 aaKnown RBP14.33□□□□□ -0.12
TRBV22-1-201ENST00000424543 FARP2O94887 1054 aaPredicted RBP14.33□□□□□ -0.12
TRBV22-1-201ENST00000424543 ATP8B2P98198 1209 aa14.33□□□□□ -0.12
TRBV22-1-201ENST00000424543 TRIM32Q13049 653 aa14.33□□□□□ -0.12
TRBV22-1-201ENST00000424543 MTMR2Q13614 643 aa14.33□□□□□ -0.12
TRBV22-1-201ENST00000424543 DEFB118Q96PH6 123 aa14.33□□□□□ -0.12
TRBV22-1-201ENST00000424543 ASCC2Q9H1I8 757 aaPredicted RBP14.33□□□□□ -0.12
TRBV22-1-201ENST00000424543 USP17L5A8MUK1 530 aa14.32□□□□□ -0.12
TRBV22-1-201ENST00000424543 FTSJ3Q8IY81 847 aaKnown RBP14.32□□□□□ -0.12
TRBV22-1-201ENST00000424543 MIER1Q8N108 512 aa14.32□□□□□ -0.12
TRBV22-1-201ENST00000424543 MIGA1Q8NAN2 632 aa14.32□□□□□ -0.12
TRBV22-1-201ENST00000424543 PROCA1Q8NCQ7 364 aaPredicted RBP14.32□□□□□ -0.12
TRBV22-1-201ENST00000424543 DIS3LQ8TF46 1054 aaKnown RBP14.32□□□□□ -0.12
TRBV22-1-201ENST00000424543 NOL10Q9BSC4 688 aaKnown RBP14.32□□□□□ -0.12
TRBV22-1-201ENST00000424543 FAM110CQ1W6H9 321 aa14.31□□□□□ -0.12
TRBV22-1-201ENST00000424543 CCDC158Q5M9N0 1113 aa14.31□□□□□ -0.12
TRBV22-1-201ENST00000424543 EAF2Q96CJ1 260 aaPredicted RBP14.31□□□□□ -0.12
TRBV22-1-201ENST00000424543 ANTXR1Q9H6X2 564 aa14.31□□□□□ -0.12
TRBV22-1-201ENST00000424543 GPR108Q9NPR9 543 aa14.31□□□□□ -0.12
TRBV22-1-201ENST00000424543 RBM27Q9P2N5 1060 aaKnown RBP14.31□□□□□ -0.12
TRBV22-1-201ENST00000424543 PNMA3Q9UL41 463 aa14.31□□□□□ -0.12
TRBV22-1-201ENST00000424543 FRMPD3Q5JV73 1810 aa14.31□□□□□ -0.12
TRBV22-1-201ENST00000424543 MYH8P13535 1937 aa14.31□□□□□ -0.12
TRBV22-1-201ENST00000424543 SGPL1O95470 568 aa14.3□□□□□ -0.12
TRBV22-1-201ENST00000424543 CYP7A1P22680 504 aa14.3□□□□□ -0.12
TRBV22-1-201ENST00000424543 IRF5Q13568 498 aa14.3□□□□□ -0.12
TRBV22-1-201ENST00000424543 NKX2-3Q8TAU0 364 aa14.3□□□□□ -0.12
TRBV22-1-201ENST00000424543 PANK1Q8TE04 598 aa14.3□□□□□ -0.12
TRBV22-1-201ENST00000424543 COA7Q96BR5 231 aa14.3□□□□□ -0.12
TRBV22-1-201ENST00000424543 BCL11AQ9H165 835 aa14.3□□□□□ -0.12
TRBV22-1-201ENST00000424543 TXNRD2Q9NNW7 524 aa14.3□□□□□ -0.12
TRBV22-1-201ENST00000424543 PI4KBQ9UBF8 816 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms