RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 XRCC5P13010 732 aaKnown RBP8.04□□□□□ -1.12
SDCBP-203ENST00000424270 NHLH1Q02575 133 aa8.04□□□□□ -1.12
SDCBP-203ENST00000424270 CCDC174Q6PII3 467 aa8.04□□□□□ -1.12
SDCBP-203ENST00000424270 SLC39A5Q6ZMH5 540 aa8.04□□□□□ -1.12
SDCBP-203ENST00000424270 LDHAL6AQ6ZMR3 332 aa8.04□□□□□ -1.12
SDCBP-203ENST00000424270 SH3RF1Q7Z6J0 888 aa8.04□□□□□ -1.12
SDCBP-203ENST00000424270 TDRD7Q8NHU6 1098 aaKnown RBP8.04□□□□□ -1.12
SDCBP-203ENST00000424270 LPAR1Q92633 364 aa8.04□□□□□ -1.12
SDCBP-203ENST00000424270 FERMT2Q96AC1 680 aa8.04□□□□□ -1.12
SDCBP-203ENST00000424270 APBA2Q99767 749 aa8.04□□□□□ -1.12
SDCBP-203ENST00000424270 PDLIM7Q9NR12 457 aa8.04□□□□□ -1.12
SDCBP-203ENST00000424270 MAST2Q6P0Q8 1798 aa8.04□□□□□ -1.12
SDCBP-203ENST00000424270 LAMA2P24043 3122 aaKnown RBP8.03□□□□□ -1.12
SDCBP-203ENST00000424270 TRIM43BA6NCK2 446 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 CHL1O00533 1208 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 CLTBP09497 229 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 MAPK4P31152 587 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 PBX2P40425 430 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 ATP2B2Q01814 1243 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 TRIM26Q12899 539 aaPredicted RBP8.03□□□□□ -1.12
SDCBP-203ENST00000424270 GRIK5Q16478 980 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 CCDC57Q2TAC2 916 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 CAVIN4Q5BKX8 364 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 CCDC84Q86UT8 332 aaPredicted RBP8.03□□□□□ -1.12
SDCBP-203ENST00000424270 GPRC5AQ8NFJ5 357 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 TRIM43Q96BQ3 446 aaPredicted RBP8.03□□□□□ -1.12
SDCBP-203ENST00000424270 PAGR1Q9BTK6 254 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 ASCC2Q9H1I8 757 aaPredicted RBP8.03□□□□□ -1.12
SDCBP-203ENST00000424270 SLC28A3Q9HAS3 691 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 TACC3Q9Y6A5 838 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 CACNA1AO00555 2505 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 LTBP2Q14767 1821 aa8.03□□□□□ -1.12
SDCBP-203ENST00000424270 PI4KAP2A4QPH2 592 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 GRXCR1A8MXD5 290 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 PRR33A8MZF0 331 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 GTPBP6O43824 516 aaPredicted RBP8.02□□□□□ -1.13
SDCBP-203ENST00000424270 PQBP1O60828 265 aaKnown RBP8.02□□□□□ -1.13
SDCBP-203ENST00000424270 GLRX3O76003 335 aaKnown RBP8.02□□□□□ -1.13
SDCBP-203ENST00000424270 IGKV5-2P06315 115 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 ADCYAP1R1P41586 468 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 EPHB4P54760 987 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 HMGCS2P54868 508 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 FOXK2Q01167 660 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 ADGRE1Q14246 886 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 RAB30Q15771 203 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 ANO1Q5XXA6 986 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 APOBEC3HQ6NTF7 200 aaKnown RBP8.02□□□□□ -1.13
SDCBP-203ENST00000424270 KSR2Q6VAB6 950 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 PI4KAP1Q8N8J0 262 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 PROCA1Q8NCQ7 364 aaPredicted RBP8.02□□□□□ -1.13
SDCBP-203ENST00000424270 PBX4Q9BYU1 374 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 MYH16Q9H6N6 1097 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.02□□□□□ -1.13
SDCBP-203ENST00000424270 TMEM39AQ9NV64 488 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 USP40Q9NVE5 1235 aa8.02□□□□□ -1.13
SDCBP-203ENST00000424270 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.02□□□□□ -1.13
SDCBP-203ENST00000424270 AK9Q5TCS8 1911 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 TCF20Q9UGU0 1960 aaKnown RBP8.01□□□□□ -1.13
SDCBP-203ENST00000424270 NEURL1BA8MQ27 555 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 CTNND1O60716 968 aaKnown RBP8.01□□□□□ -1.13
SDCBP-203ENST00000424270 SSTR3P32745 418 aaPredicted RBP8.01□□□□□ -1.13
SDCBP-203ENST00000424270 TMPOP42166 694 aaKnown RBP8.01□□□□□ -1.13
SDCBP-203ENST00000424270 TLE2Q04725 743 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 NFIAQ12857 509 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 SPP2Q13103 211 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 PLEKHH3Q7Z736 793 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 EDC3Q96F86 508 aaKnown RBP8.01□□□□□ -1.13
SDCBP-203ENST00000424270 ZNF594Q96JF6 807 aaPredicted RBP8.01□□□□□ -1.13
SDCBP-203ENST00000424270 FAM84BQ96KN1 310 aaPredicted RBP8.01□□□□□ -1.13
SDCBP-203ENST00000424270 CHMP4AQ9BY43 222 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 NKX2-4Q9H2Z4 354 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 C11orf16Q9NQ32 467 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 TMOD4Q9NZQ9 345 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 NDUFB9Q9Y6M9 179 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 BDP1A6H8Y1 2624 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 PIEZO1Q92508 2521 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 MYH3P11055 1940 aa8.01□□□□□ -1.13
SDCBP-203ENST00000424270 H7C1W4 665 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 ERC2O15083 957 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 ST18O60284 1047 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 PEX10O60683 326 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 UBE4AQ14139 1066 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 GCKRQ14397 625 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 CCDC30Q5VVM6 783 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 CDC42EP5Q6NZY7 148 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 HHIPL2Q6UWX4 724 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 GPR142Q7Z601 462 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 ZNF280CQ8ND82 737 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 HERVK_113Q902F9 699 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 FBXL18Q96ME1 805 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 STK31Q9BXU1 1019 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 MORF4L1Q9UBU8 362 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 IVNS1ABPQ9Y6Y0 642 aa8□□□□□ -1.13
SDCBP-203ENST00000424270 PHF20L1A8MW92 1017 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 PI4K2BG5E9Z4 385 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 CSF1RP07333 972 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 CYP2C19P33261 490 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 MAP2K5Q13163 448 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 PICALMQ13492 652 aa7.99□□□□□ -1.13
SDCBP-203ENST00000424270 PPP2R2DQ66LE6 453 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms