RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 ZSCAN29Q8IWY8 852 aaPredicted RBP4.25□□□□□ -1.73
PMS1-209ENST00000424059 C3orf58Q8NDZ4 430 aa4.25□□□□□ -1.73
PMS1-209ENST00000424059 BHLHE22Q8NFJ8 381 aaPredicted RBP4.25□□□□□ -1.73
PMS1-209ENST00000424059 STK35Q8TDR2 534 aa4.25□□□□□ -1.73
PMS1-209ENST00000424059 ASB11Q8WXH4 323 aa4.25□□□□□ -1.73
PMS1-209ENST00000424059 ACSBG1Q96GR2 724 aa4.25□□□□□ -1.73
PMS1-209ENST00000424059 MBNL3Q9NUK0 354 aaKnown RBP4.25□□□□□ -1.73
PMS1-209ENST00000424059 CDK11AQ9UQ88 783 aaPredicted RBP4.25□□□□□ -1.73
PMS1-209ENST00000424059 SUPT5HO00267 1087 aaKnown RBP4.24□□□□□ -1.73
PMS1-209ENST00000424059 FARP2O94887 1054 aaPredicted RBP4.24□□□□□ -1.73
PMS1-209ENST00000424059 RNASE1P07998 156 aaKnown RBP4.24□□□□□ -1.73
PMS1-209ENST00000424059 CDK11BP21127 795 aaKnown RBP4.24□□□□□ -1.73
PMS1-209ENST00000424059 MAPK1P28482 360 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 FMR1Q06787 632 aaKnown RBP eCLIP4.24□□□□□ -1.73
PMS1-209ENST00000424059 MAP1SQ66K74 1059 aaPredicted RBP4.24□□□□□ -1.73
PMS1-209ENST00000424059 NXPE4Q6UWF7 544 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 FAM214BQ7L5A3 538 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 FAM168AQ92567 244 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 PRDM10Q9NQV6 1147 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 CYP8B1Q9UNU6 501 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 FGD1P98174 961 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 RING1Q06587 406 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 LLGL2Q6P1M3 1020 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 PI16Q6UXB8 463 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 C22orf34Q6ZV56 151 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 CBX8Q9HC52 389 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 FAM53CQ9NYF3 392 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 LMCD1Q9NZU5 365 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 PLAGL2Q9UPG8 496 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 MAPK8IP1Q9UQF2 711 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.24□□□□□ -1.73
PMS1-209ENST00000424059 CARMIL2Q6F5E8 1435 aa4.24□□□□□ -1.73
PMS1-209ENST00000424059 BMP6P22004 513 aa4.23□□□□□ -1.73
PMS1-209ENST00000424059 ATP2B2Q01814 1243 aa4.23□□□□□ -1.73
PMS1-209ENST00000424059 ZBTB37Q5TC79 503 aa4.23□□□□□ -1.73
PMS1-209ENST00000424059 LRRN4CLQ8ND94 238 aa4.23□□□□□ -1.73
PMS1-209ENST00000424059 ZNF507Q8TCN5 953 aa4.23□□□□□ -1.73
PMS1-209ENST00000424059 FOXQ1Q9C009 403 aa4.23□□□□□ -1.73
PMS1-209ENST00000424059 SPG7Q9UQ90 795 aa4.23□□□□□ -1.73
PMS1-209ENST00000424059 GNAT3A8MTJ3 354 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 ENC1O14682 589 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 LRIG2O94898 1065 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 CAP2P40123 477 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 CDC37L1Q7L3B6 337 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 PICK1Q9NRD5 415 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 U3KQE9 123 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 NTF4P34130 210 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 PKN1Q16512 942 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 SV2BQ7L1I2 683 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 SPACA3Q8IXA5 215 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 CCDC120Q96HB5 630 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 COX4I2Q96KJ9 171 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 HEXIM2Q96MH2 286 aaKnown RBP4.22□□□□□ -1.73
PMS1-209ENST00000424059 ASB16Q96NS5 453 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 SLC38A3Q99624 504 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 FAM8A1Q9UBU6 413 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 ADAMTS6Q9UKP5 1117 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 TACC3Q9Y6A5 838 aa4.22□□□□□ -1.73
PMS1-209ENST00000424059 ITIH2P19823 946 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 IKZF1Q13422 519 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 PPM1JQ5JR12 505 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 TPTE2Q6XPS3 522 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 C12orf49Q9H741 205 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 PRDM5Q9NQX1 630 aaPredicted RBP4.21□□□□□ -1.74
PMS1-209ENST00000424059 PITPNM2Q9BZ72 1349 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 DBX1A6NMT0 343 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 PATL2C9JE40 543 aaKnown RBP4.21□□□□□ -1.74
PMS1-209ENST00000424059 IGSF3O75054 1194 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 KCNA1Q09470 495 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 ZNF746Q6NUN9 644 aaPredicted RBP4.21□□□□□ -1.74
PMS1-209ENST00000424059 ARMCX6Q7L4S7 300 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 ELMO3Q96BJ8 720 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 FAM84AQ96KN4 292 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 PCDHA4Q9UN74 947 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 SNCAIPQ9Y6H5 919 aa4.21□□□□□ -1.74
PMS1-209ENST00000424059 EOMESO95936 686 aa4.2□□□□□ -1.74
PMS1-209ENST00000424059 HSP90B1P14625 803 aaKnown RBP4.2□□□□□ -1.74
PMS1-209ENST00000424059 AFMP43652 599 aa4.2□□□□□ -1.74
PMS1-209ENST00000424059 HDXQ7Z353 690 aa4.2□□□□□ -1.74
PMS1-209ENST00000424059 ZSWIM9Q86XI8 627 aa4.2□□□□□ -1.74
PMS1-209ENST00000424059 KSR1Q8IVT5 923 aa4.2□□□□□ -1.74
PMS1-209ENST00000424059 ARID3AQ99856 593 aa4.2□□□□□ -1.74
PMS1-209ENST00000424059 DCDC2CA8MYV0 355 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 ZNF865P0CJ78 1059 aaPredicted RBP4.19□□□□□ -1.74
PMS1-209ENST00000424059 ZP2Q05996 745 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 NKPD1Q17RQ9 610 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 CYFIP1Q7L576 1253 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 THAP5Q7Z6K1 395 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 MFSD2AQ8NA29 543 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 GRIN3AQ8TCU5 1115 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 PPP1R16BQ96T49 567 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 CTNND2Q9UQB3 1225 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 PAGE1O75459 146 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 CD96P40200 585 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 MAPK8P45983 427 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 RPS26P62854 115 aaKnown RBP4.19□□□□□ -1.74
PMS1-209ENST00000424059 ZNF648Q5T619 568 aaPredicted RBP4.19□□□□□ -1.74
PMS1-209ENST00000424059 PCNX4Q63HM2 1172 aa4.19□□□□□ -1.74
PMS1-209ENST00000424059 NPAS4Q8IUM7 802 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms