RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 CPA4Q9UI42 421 aa18.55■□□□□ 0.56
USB1-202ENST00000423271 AFG3L2Q9Y4W6 797 aa18.55■□□□□ 0.56
USB1-202ENST00000423271 ATAD5Q96QE3 1844 aa18.55■□□□□ 0.56
USB1-202ENST00000423271 FLT1P17948 1338 aa18.54■□□□□ 0.56
USB1-202ENST00000423271 ECM2O94769 699 aaPredicted RBP18.54■□□□□ 0.56
USB1-202ENST00000423271 CYP7A1P22680 504 aa18.54■□□□□ 0.56
USB1-202ENST00000423271 DYNLL1P63167 89 aaKnown RBP18.54■□□□□ 0.56
USB1-202ENST00000423271 RRP1BQ14684 758 aaKnown RBP18.54■□□□□ 0.56
USB1-202ENST00000423271 C17orf99Q6UX52 265 aa18.54■□□□□ 0.56
USB1-202ENST00000423271 TGFBRAP1Q8WUH2 860 aa18.54■□□□□ 0.56
USB1-202ENST00000423271 HMMRO75330 724 aa18.53■□□□□ 0.56
USB1-202ENST00000423271 PLCG2P16885 1265 aa18.53■□□□□ 0.56
USB1-202ENST00000423271 LACTBP83111 547 aaPredicted RBP18.53■□□□□ 0.56
USB1-202ENST00000423271 GADL1Q6ZQY3 521 aa18.53■□□□□ 0.56
USB1-202ENST00000423271 MIGA1Q8NAN2 632 aa18.53■□□□□ 0.56
USB1-202ENST00000423271 PTCH2Q9Y6C5 1203 aa18.53■□□□□ 0.56
USB1-202ENST00000423271 KIAA0100Q14667 2235 aaKnown RBP18.53■□□□□ 0.56
USB1-202ENST00000423271 TRIM75PA6NK02 468 aa18.52■□□□□ 0.56
USB1-202ENST00000423271 CYP2C8P10632 490 aa18.52■□□□□ 0.56
USB1-202ENST00000423271 CTGFP29279 349 aa18.52■□□□□ 0.56
USB1-202ENST00000423271 MAGEB6Q8N7X4 407 aa18.52■□□□□ 0.56
USB1-202ENST00000423271 KIF1BPQ96EK5 621 aa18.52■□□□□ 0.56
USB1-202ENST00000423271 BCL11AQ9H165 835 aa18.52■□□□□ 0.56
USB1-202ENST00000423271 IGSF3O75054 1194 aa18.51■□□□□ 0.55
USB1-202ENST00000423271 FASTKD5Q7L8L6 764 aaKnown RBP18.51■□□□□ 0.55
USB1-202ENST00000423271 CLASRPQ8N2M8 674 aaKnown RBP18.51■□□□□ 0.55
USB1-202ENST00000423271 ARMC5Q96C12 935 aa18.51■□□□□ 0.55
USB1-202ENST00000423271 PARK7Q99497 189 aaKnown RBP18.51■□□□□ 0.55
USB1-202ENST00000423271 DNAJC18Q9H819 358 aa18.51■□□□□ 0.55
USB1-202ENST00000423271 SAP30BPQ9UHR5 308 aaKnown RBP18.51■□□□□ 0.55
USB1-202ENST00000423271 PALD1Q9ULE6 856 aa18.51■□□□□ 0.55
USB1-202ENST00000423271 MKI67P46013 3256 aaKnown RBP18.5■□□□□ 0.55
USB1-202ENST00000423271 CAP2P40123 477 aa18.5■□□□□ 0.55
USB1-202ENST00000423271 PDE3AQ14432 1141 aa18.5■□□□□ 0.55
USB1-202ENST00000423271 KIF22Q14807 665 aa18.5■□□□□ 0.55
USB1-202ENST00000423271 ARHGEF6Q15052 776 aa18.5■□□□□ 0.55
USB1-202ENST00000423271 SLC4A8Q2Y0W8 1093 aa18.5■□□□□ 0.55
USB1-202ENST00000423271 DHX36Q9H2U1 1008 aaKnown RBP18.5■□□□□ 0.55
USB1-202ENST00000423271 PI4KBQ9UBF8 816 aa18.5■□□□□ 0.55
USB1-202ENST00000423271 HERC5Q9UII4 1024 aaKnown RBP18.5■□□□□ 0.55
USB1-202ENST00000423271 MYH1P12882 1939 aa18.49■□□□□ 0.55
USB1-202ENST00000423271 POTEFA5A3E0 1075 aa18.49■□□□□ 0.55
USB1-202ENST00000423271 IFIT2P09913 472 aaKnown RBP18.49■□□□□ 0.55
USB1-202ENST00000423271 BCRP11274 1271 aa18.49■□□□□ 0.55
USB1-202ENST00000423271 MAP3K12Q12852 859 aa18.49■□□□□ 0.55
USB1-202ENST00000423271 CHMP4BQ9H444 224 aaKnown RBP18.49■□□□□ 0.55
USB1-202ENST00000423271 LOC285556D6RIA3 1793 aa18.49■□□□□ 0.55
USB1-202ENST00000423271 RBBP6Q7Z6E9 1792 aaKnown RBP18.49■□□□□ 0.55
USB1-202ENST00000423271 RAB11FIP3O75154 756 aa18.48■□□□□ 0.55
USB1-202ENST00000423271 JAG1P78504 1218 aa18.48■□□□□ 0.55
USB1-202ENST00000423271 SPP2Q13103 211 aa18.48■□□□□ 0.55
USB1-202ENST00000423271 SHROOM1Q2M3G4 852 aaPredicted RBP18.48■□□□□ 0.55
USB1-202ENST00000423271 TREML2Q5T2D2 321 aa18.48■□□□□ 0.55
USB1-202ENST00000423271 TRIM47Q96LD4 638 aa18.48■□□□□ 0.55
USB1-202ENST00000423271 PSMC4P43686 418 aa18.47■□□□□ 0.55
USB1-202ENST00000423271 RRP1P56182 461 aaKnown RBP18.47■□□□□ 0.55
USB1-202ENST00000423271 SLC9C1Q4G0N8 1177 aa18.47■□□□□ 0.55
USB1-202ENST00000423271 METTL16Q86W50 562 aaKnown RBP18.47■□□□□ 0.55
USB1-202ENST00000423271 ZNF280CQ8ND82 737 aa18.47■□□□□ 0.55
USB1-202ENST00000423271 EDC3Q96F86 508 aaKnown RBP18.47■□□□□ 0.55
USB1-202ENST00000423271 ZNF333Q96JL9 665 aa18.47■□□□□ 0.55
USB1-202ENST00000423271 DNAJC2Q99543 621 aaKnown RBP18.47■□□□□ 0.55
USB1-202ENST00000423271 AGTPBP1Q9UPW5 1226 aa18.47■□□□□ 0.55
USB1-202ENST00000423271 SLC45A1Q9Y2W3 748 aa18.47■□□□□ 0.55
USB1-202ENST00000423271 DDX60LQ5H9U9 1706 aaKnown RBP18.46■□□□□ 0.55
USB1-202ENST00000423271 MGAMO43451 1857 aa18.46■□□□□ 0.55
USB1-202ENST00000423271 GOLIM4O00461 696 aa18.46■□□□□ 0.55
USB1-202ENST00000423271 GDF11O95390 407 aa18.46■□□□□ 0.55
USB1-202ENST00000423271 HMGCS2P54868 508 aa18.46■□□□□ 0.55
USB1-202ENST00000423271 CRACR2BQ8N4Y2 399 aaPredicted RBP18.46■□□□□ 0.55
USB1-202ENST00000423271 SH3TC2Q8TF17 1288 aa18.46■□□□□ 0.55
USB1-202ENST00000423271 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.46■□□□□ 0.55
USB1-202ENST00000423271 USP17L5A8MUK1 530 aa18.45■□□□□ 0.54
USB1-202ENST00000423271 FMNL1O95466 1100 aaPredicted RBP18.45■□□□□ 0.54
USB1-202ENST00000423271 GNRH1P01148 92 aa18.45■□□□□ 0.54
USB1-202ENST00000423271 HLA-DOAP06340 250 aa18.45■□□□□ 0.54
USB1-202ENST00000423271 PDE6AP16499 860 aa18.45■□□□□ 0.54
USB1-202ENST00000423271 OSBPP22059 807 aa18.45■□□□□ 0.54
USB1-202ENST00000423271 USP5P45974 858 aa18.45■□□□□ 0.54
USB1-202ENST00000423271 TTF1Q15361 905 aaPredicted RBP18.45■□□□□ 0.54
USB1-202ENST00000423271 FOXP4Q8IVH2 680 aaPredicted RBP18.45■□□□□ 0.54
USB1-202ENST00000423271 RIOK1Q9BRS2 568 aaKnown RBP18.45■□□□□ 0.54
USB1-202ENST00000423271 TRIM34Q9BYJ4 488 aa18.45■□□□□ 0.54
USB1-202ENST00000423271 SRRDQ9UH36 339 aa18.45■□□□□ 0.54
USB1-202ENST00000423271 NAV1Q8NEY1 1877 aa18.45■□□□□ 0.54
USB1-202ENST00000423271 SMARCA5O60264 1052 aaPredicted RBP18.44■□□□□ 0.54
USB1-202ENST00000423271 MYCP01106 439 aaPredicted RBP18.44■□□□□ 0.54
USB1-202ENST00000423271 SLC9C2Q5TAH2 1124 aa18.44■□□□□ 0.54
USB1-202ENST00000423271 CERS3Q8IU89 383 aa18.44■□□□□ 0.54
USB1-202ENST00000423271 PROCA1Q8NCQ7 364 aaPredicted RBP18.44■□□□□ 0.54
USB1-202ENST00000423271 SMCR8Q8TEV9 937 aaPredicted RBP18.44■□□□□ 0.54
USB1-202ENST00000423271 TBC1D2Q9BYX2 928 aa18.44■□□□□ 0.54
USB1-202ENST00000423271 MAGEB6P1A0A0J9YX57 407 aa18.43■□□□□ 0.54
USB1-202ENST00000423271 TCRBV5S4A2TA0A5A2 114 aa18.43■□□□□ 0.54
USB1-202ENST00000423271 ASNSP08243 561 aa18.43■□□□□ 0.54
USB1-202ENST00000423271 PRMT2P55345 433 aa18.43■□□□□ 0.54
USB1-202ENST00000423271 MTMR2Q13614 643 aa18.43■□□□□ 0.54
USB1-202ENST00000423271 TMED8Q6PL24 325 aaPredicted RBP18.43■□□□□ 0.54
USB1-202ENST00000423271 BOLA2Q9H3K6 86 aa18.43■□□□□ 0.54
USB1-202ENST00000423271 AS3MTQ9HBK9 375 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms