RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.52■■□□□ 1.2
MCF2L-214ENST00000423251 PI4KBQ9UBF8 816 aa22.52■■□□□ 1.2
MCF2L-214ENST00000423251 TBC1D12O60347 775 aa22.51■■□□□ 1.19
MCF2L-214ENST00000423251 SREBF2Q12772 1141 aa22.51■■□□□ 1.19
MCF2L-214ENST00000423251 ZNF341Q9BYN7 854 aa22.51■■□□□ 1.19
MCF2L-214ENST00000423251 AK9Q5TCS8 1911 aa22.51■■□□□ 1.19
MCF2L-214ENST00000423251 TNRC18O15417 2968 aaPredicted RBP22.5■■□□□ 1.19
MCF2L-214ENST00000423251 GSPT1P15170 499 aaKnown RBP22.5■■□□□ 1.19
MCF2L-214ENST00000423251 SDSP20132 328 aa22.5■■□□□ 1.19
MCF2L-214ENST00000423251 FOXP4Q8IVH2 680 aaPredicted RBP22.5■■□□□ 1.19
MCF2L-214ENST00000423251 HELLSQ9NRZ9 838 aa22.5■■□□□ 1.19
MCF2L-214ENST00000423251 PALD1Q9ULE6 856 aa22.5■■□□□ 1.19
MCF2L-214ENST00000423251 SLC4A4Q9Y6R1 1079 aa22.5■■□□□ 1.19
MCF2L-214ENST00000423251 LAMB1P07942 1786 aa22.5■■□□□ 1.19
MCF2L-214ENST00000423251 OTOFQ9HC10 1997 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 M0R2C6 588 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 GPR25O00155 361 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 HIP1O00291 1037 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 GPAA1O43292 621 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 PRKAB2O43741 272 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 GNAT2P19087 354 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 MAP3K9P80192 1104 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 SPRYD7Q5W111 196 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 ANKRD13AQ8IZ07 590 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.49■■□□□ 1.19
MCF2L-214ENST00000423251 SDR42E1Q8WUS8 393 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 SEC62Q99442 399 aaKnown RBP22.49■■□□□ 1.19
MCF2L-214ENST00000423251 DCP1AQ9NPI6 582 aaPredicted RBP22.49■■□□□ 1.19
MCF2L-214ENST00000423251 ZNF112Q9UJU3 913 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 HPS5Q9UPZ3 1129 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 FOCADQ5VW36 1801 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 CDK5RAP2Q96SN8 1893 aa22.49■■□□□ 1.19
MCF2L-214ENST00000423251 TTC6Q86TZ1 520 aa22.48■■□□□ 1.19
MCF2L-214ENST00000423251 METTL16Q86W50 562 aaKnown RBP22.48■■□□□ 1.19
MCF2L-214ENST00000423251 CLMNQ96JQ2 1002 aa22.48■■□□□ 1.19
MCF2L-214ENST00000423251 R3HDMLQ9H3Y0 253 aa22.48■■□□□ 1.19
MCF2L-214ENST00000423251 SAP30BPQ9UHR5 308 aaKnown RBP22.48■■□□□ 1.19
MCF2L-214ENST00000423251 PDE4DIPQ5VU43 2346 aa22.47■■□□□ 1.19
MCF2L-214ENST00000423251 HLA-DOAP06340 250 aa22.47■■□□□ 1.19
MCF2L-214ENST00000423251 MCMDC2Q4G0Z9 681 aa22.47■■□□□ 1.19
MCF2L-214ENST00000423251 GIMAP6Q6P9H5 292 aa22.47■■□□□ 1.19
MCF2L-214ENST00000423251 SLC10A4Q96EP9 437 aa22.47■■□□□ 1.19
MCF2L-214ENST00000423251 DDRGK1Q96HY6 314 aa22.47■■□□□ 1.19
MCF2L-214ENST00000423251 MCM9Q9NXL9 1143 aa22.47■■□□□ 1.19
MCF2L-214ENST00000423251 HERC5Q9UII4 1024 aaKnown RBP22.47■■□□□ 1.19
MCF2L-214ENST00000423251 PHF20L1A8MW92 1017 aa22.46■■□□□ 1.19
MCF2L-214ENST00000423251 PATL2C9JE40 543 aaKnown RBP22.46■■□□□ 1.19
MCF2L-214ENST00000423251 POLR3DP05423 398 aaPredicted RBP22.46■■□□□ 1.19
MCF2L-214ENST00000423251 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.46■■□□□ 1.19
MCF2L-214ENST00000423251 FAM227BQ96M60 508 aa22.46■■□□□ 1.19
MCF2L-214ENST00000423251 WRNIP1Q96S55 665 aa22.46■■□□□ 1.19
MCF2L-214ENST00000423251 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.46■■□□□ 1.191e-7■■■■□ 25.6
MCF2L-214ENST00000423251 GSG1L2A8MUP6 293 aa22.45■■□□□ 1.18
MCF2L-214ENST00000423251 SLC34A2O95436 690 aa22.45■■□□□ 1.18
MCF2L-214ENST00000423251 NMIQ13287 307 aaPredicted RBP22.45■■□□□ 1.18
MCF2L-214ENST00000423251 NOM1Q5C9Z4 860 aaKnown RBP22.45■■□□□ 1.18
MCF2L-214ENST00000423251 SKAP1Q86WV1 359 aa22.45■■□□□ 1.18
MCF2L-214ENST00000423251 WNK4Q96J92 1243 aa22.45■■□□□ 1.18
MCF2L-214ENST00000423251 EHD4Q9H223 541 aa22.45■■□□□ 1.18
MCF2L-214ENST00000423251 DIAPH3Q9NSV4 1193 aa22.45■■□□□ 1.18
MCF2L-214ENST00000423251 CSADQ9Y600 493 aa22.45■■□□□ 1.18
MCF2L-214ENST00000423251 A0A0D9SFI3 127 aa22.44■■□□□ 1.18
MCF2L-214ENST00000423251 PKN2Q16513 984 aaKnown RBP22.44■■□□□ 1.18
MCF2L-214ENST00000423251 CFHR5Q9BXR6 569 aa22.44■■□□□ 1.18
MCF2L-214ENST00000423251 TAOK2Q9UL54 1235 aa22.44■■□□□ 1.18
MCF2L-214ENST00000423251 MANSC4A6NHS7 340 aaPredicted RBP22.43■■□□□ 1.18
MCF2L-214ENST00000423251 FKTNO75072 461 aa22.43■■□□□ 1.18
MCF2L-214ENST00000423251 PLCD1P51178 756 aa22.43■■□□□ 1.18
MCF2L-214ENST00000423251 VGLL4Q14135 290 aa22.43■■□□□ 1.18
MCF2L-214ENST00000423251 CRACR2BQ8N4Y2 399 aaPredicted RBP22.43■■□□□ 1.18
MCF2L-214ENST00000423251 SERPINB13Q9UIV8 391 aa22.43■■□□□ 1.18
MCF2L-214ENST00000423251 MYH1P12882 1939 aa22.43■■□□□ 1.18
MCF2L-214ENST00000423251 USP17L12C9JPN9 530 aa22.42■■□□□ 1.18
MCF2L-214ENST00000423251 USP17L21D6R901 530 aa22.42■■□□□ 1.18
MCF2L-214ENST00000423251 CTNND1O60716 968 aaKnown RBP22.42■■□□□ 1.18
MCF2L-214ENST00000423251 APPP05067 770 aa22.42■■□□□ 1.18
MCF2L-214ENST00000423251 SLURP2P0DP57 97 aa22.42■■□□□ 1.18
MCF2L-214ENST00000423251 INPP5BP32019 993 aa22.42■■□□□ 1.18
MCF2L-214ENST00000423251 MFAP1P55081 439 aaKnown RBP22.42■■□□□ 1.18
MCF2L-214ENST00000423251 BMP2KLQ5H9B9 411 aa22.42■■□□□ 1.18
MCF2L-214ENST00000423251 NOL9Q5SY16 702 aaKnown RBP22.42■■□□□ 1.18
MCF2L-214ENST00000423251 CCDC129Q6ZRS4 1044 aa22.42■■□□□ 1.18
MCF2L-214ENST00000423251 AMOTL1Q8IY63 956 aa22.42■■□□□ 1.18
MCF2L-214ENST00000423251 ZKSCAN4Q969J2 545 aaPredicted RBP22.42■■□□□ 1.18
MCF2L-214ENST00000423251 TRIM34Q9BYJ4 488 aa22.42■■□□□ 1.18
MCF2L-214ENST00000423251 NACAP1Q9BZK3 213 aa22.42■■□□□ 1.18
MCF2L-214ENST00000423251 ZBTB48P10074 688 aaPredicted RBP22.41■■□□□ 1.18
MCF2L-214ENST00000423251 SBK1Q52WX2 424 aa22.41■■□□□ 1.18
MCF2L-214ENST00000423251 C12orf60Q5U649 245 aa22.41■■□□□ 1.18
MCF2L-214ENST00000423251 CTR9Q6PD62 1173 aa22.41■■□□□ 1.18
MCF2L-214ENST00000423251 CWC27Q6UX04 472 aaKnown RBP22.41■■□□□ 1.18
MCF2L-214ENST00000423251 IFNL1Q8IU54 200 aa22.41■■□□□ 1.18
MCF2L-214ENST00000423251 FAM196BA6NMK8 535 aa22.4■■□□□ 1.18
MCF2L-214ENST00000423251 IGF2BP3O00425 579 aaKnown RBP eCLIP22.4■■□□□ 1.18
MCF2L-214ENST00000423251 ALDH1A1P00352 501 aa22.4■■□□□ 1.18
MCF2L-214ENST00000423251 GJA5P36382 358 aa22.4■■□□□ 1.18
MCF2L-214ENST00000423251 GABPAQ06546 454 aa22.4■■□□□ 1.18
MCF2L-214ENST00000423251 SLC4A8Q2Y0W8 1093 aa22.4■■□□□ 1.18
MCF2L-214ENST00000423251 FBXO46Q6PJ61 603 aaPredicted RBP22.4■■□□□ 1.18
MCF2L-214ENST00000423251 IFNL3Q8IZI9 196 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms