RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 MIGA1Q8NAN2 632 aa26.6■■□□□ 1.85
TRAF4-204ENST00000422344 TGFBRAP1Q8WUH2 860 aa26.6■■□□□ 1.85
TRAF4-204ENST00000422344 DCTPP1Q9H773 170 aa26.6■■□□□ 1.85
TRAF4-204ENST00000422344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP26.6■■□□□ 1.85
TRAF4-204ENST00000422344 PHF20L1A8MW92 1017 aa26.59■■□□□ 1.85
TRAF4-204ENST00000422344 MAP3K10Q02779 954 aa26.59■■□□□ 1.85
TRAF4-204ENST00000422344 MAPKAPK5Q8IW41 473 aa26.59■■□□□ 1.85
TRAF4-204ENST00000422344 CRBNQ96SW2 442 aa26.59■■□□□ 1.85
TRAF4-204ENST00000422344 DHX36Q9H2U1 1008 aaKnown RBP26.59■■□□□ 1.85
TRAF4-204ENST00000422344 TBC1D12O60347 775 aa26.58■■□□□ 1.85
TRAF4-204ENST00000422344 ATP5JP18859 108 aa26.58■■□□□ 1.85
TRAF4-204ENST00000422344 DYNLL1P63167 89 aaKnown RBP26.58■■□□□ 1.85
TRAF4-204ENST00000422344 ARHGEF6Q15052 776 aa26.58■■□□□ 1.85
TRAF4-204ENST00000422344 BOLA2Q9H3K6 86 aa26.58■■□□□ 1.85
TRAF4-204ENST00000422344 FLT1P17948 1338 aa26.58■■□□□ 1.85
TRAF4-204ENST00000422344 CTNND1O60716 968 aaKnown RBP26.57■■□□□ 1.84
TRAF4-204ENST00000422344 SLC9C2Q5TAH2 1124 aa26.57■■□□□ 1.84
TRAF4-204ENST00000422344 TMEM106CQ9BVX2 250 aa26.57■■□□□ 1.84
TRAF4-204ENST00000422344 PAG1Q9NWQ8 432 aa26.57■■□□□ 1.84
TRAF4-204ENST00000422344 PCDHB15Q9Y5E8 787 aa26.57■■□□□ 1.84
TRAF4-204ENST00000422344 PTCH2Q9Y6C5 1203 aa26.57■■□□□ 1.84
TRAF4-204ENST00000422344 SLURP2P0DP57 97 aa26.56■■□□□ 1.84
TRAF4-204ENST00000422344 SLC9C1Q4G0N8 1177 aa26.56■■□□□ 1.84
TRAF4-204ENST00000422344 ZNF333Q96JL9 665 aa26.56■■□□□ 1.84
TRAF4-204ENST00000422344 TRIM34Q9BYJ4 488 aa26.56■■□□□ 1.84
TRAF4-204ENST00000422344 PI4KBQ9UBF8 816 aa26.56■■□□□ 1.84
TRAF4-204ENST00000422344 FAM196BA6NMK8 535 aa26.55■■□□□ 1.84
TRAF4-204ENST00000422344 USP5P45974 858 aa26.55■■□□□ 1.84
TRAF4-204ENST00000422344 GPATCH3Q96I76 525 aa26.55■■□□□ 1.84
TRAF4-204ENST00000422344 HERC5Q9UII4 1024 aaKnown RBP26.55■■□□□ 1.84
TRAF4-204ENST00000422344 KCNH4Q9UQ05 1017 aa26.55■■□□□ 1.84
TRAF4-204ENST00000422344 PDE6AP16499 860 aa26.54■■□□□ 1.84
TRAF4-204ENST00000422344 HABP4Q5JVS0 413 aaKnown RBP26.54■■□□□ 1.84
TRAF4-204ENST00000422344 NBPF11Q86T75 865 aa26.54■■□□□ 1.84
TRAF4-204ENST00000422344 HAUS7Q99871 368 aa26.54■■□□□ 1.84
TRAF4-204ENST00000422344 ZHX2Q9Y6X8 837 aa26.54■■□□□ 1.84
TRAF4-204ENST00000422344 DOCK1Q14185 1865 aa26.53■■□□□ 1.84
TRAF4-204ENST00000422344 MAGEB6P1A0A0J9YX57 407 aa26.53■■□□□ 1.84
TRAF4-204ENST00000422344 HLA-DOAP06340 250 aa26.53■■□□□ 1.84
TRAF4-204ENST00000422344 PTPRAP18433 802 aa26.53■■□□□ 1.84
TRAF4-204ENST00000422344 CRACR2BQ8N4Y2 399 aaPredicted RBP26.53■■□□□ 1.84
TRAF4-204ENST00000422344 EDC3Q96F86 508 aaKnown RBP26.53■■□□□ 1.84
TRAF4-204ENST00000422344 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.53■■□□□ 1.842e-8■■□□□ 13.1
TRAF4-204ENST00000422344 ZCCHC17Q9NP64 241 aaKnown RBP26.53■■□□□ 1.84
TRAF4-204ENST00000422344 ECHDC1Q9NTX5 307 aa26.53■■□□□ 1.84
TRAF4-204ENST00000422344 SAP30BPQ9UHR5 308 aaKnown RBP26.53■■□□□ 1.84
TRAF4-204ENST00000422344 FOCADQ5VW36 1801 aa26.53■■□□□ 1.84
TRAF4-204ENST00000422344 CDK5RAP2Q96SN8 1893 aa26.53■■□□□ 1.84
TRAF4-204ENST00000422344 BTBD19C9JJ37 291 aa26.52■■□□□ 1.84
TRAF4-204ENST00000422344 CXCL11O14625 94 aa26.52■■□□□ 1.84
TRAF4-204ENST00000422344 ZNF532Q9HCE3 1301 aa26.52■■□□□ 1.84
TRAF4-204ENST00000422344 PALD1Q9ULE6 856 aa26.52■■□□□ 1.84
TRAF4-204ENST00000422344 TLR2O60603 784 aa26.51■■□□□ 1.83
TRAF4-204ENST00000422344 MYCP01106 439 aaPredicted RBP26.51■■□□□ 1.83
TRAF4-204ENST00000422344 SLC4A8Q2Y0W8 1093 aa26.51■■□□□ 1.83
TRAF4-204ENST00000422344 FOXP4Q8IVH2 680 aaPredicted RBP26.51■■□□□ 1.83
TRAF4-204ENST00000422344 ARHGAP39Q9C0H5 1083 aa26.51■■□□□ 1.83
TRAF4-204ENST00000422344 ZBTB47Q9UFB7 747 aaPredicted RBP26.51■■□□□ 1.83
TRAF4-204ENST00000422344 KIF22Q14807 665 aa26.5■■□□□ 1.83
TRAF4-204ENST00000422344 ANKRD23Q86SG2 305 aa26.5■■□□□ 1.83
TRAF4-204ENST00000422344 ZSWIM8A7E2V4 1837 aa26.5■■□□□ 1.83
TRAF4-204ENST00000422344 RIOK1Q9BRS2 568 aaKnown RBP26.49■■□□□ 1.83
TRAF4-204ENST00000422344 CRNKL1Q9BZJ0 848 aaKnown RBP26.49■■□□□ 1.83
TRAF4-204ENST00000422344 CAP2P40123 477 aa26.48■■□□□ 1.83
TRAF4-204ENST00000422344 LACTBP83111 547 aaPredicted RBP26.48■■□□□ 1.83
TRAF4-204ENST00000422344 FASTKD5Q7L8L6 764 aaKnown RBP26.48■■□□□ 1.83
TRAF4-204ENST00000422344 SH3TC2Q8TF17 1288 aa26.48■■□□□ 1.83
TRAF4-204ENST00000422344 AFG3L2Q9Y4W6 797 aa26.48■■□□□ 1.83
TRAF4-204ENST00000422344 TRIM75PA6NK02 468 aa26.47■■□□□ 1.83
TRAF4-204ENST00000422344 PDHXO00330 501 aa26.47■■□□□ 1.83
TRAF4-204ENST00000422344 ECM2O94769 699 aaPredicted RBP26.47■■□□□ 1.83
TRAF4-204ENST00000422344 ZSCAN25Q6NSZ9 544 aa26.47■■□□□ 1.83
TRAF4-204ENST00000422344 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.47■■□□□ 1.83
TRAF4-204ENST00000422344 CEP290O15078 2479 aa26.46■■□□□ 1.83
TRAF4-204ENST00000422344 TCRBV5S4A2TA0A5A2 114 aa26.46■■□□□ 1.83
TRAF4-204ENST00000422344 ADD2P35612 726 aa26.46■■□□□ 1.83
TRAF4-204ENST00000422344 AAMPQ13685 434 aa26.46■■□□□ 1.83
TRAF4-204ENST00000422344 GADL1Q6ZQY3 521 aa26.46■■□□□ 1.83
TRAF4-204ENST00000422344 TTC6Q86TZ1 520 aa26.46■■□□□ 1.83
TRAF4-204ENST00000422344 TBC1D2Q9BYX2 928 aa26.46■■□□□ 1.83
TRAF4-204ENST00000422344 SIPA1L1O43166 1804 aa26.45■■□□□ 1.82
TRAF4-204ENST00000422344 A0A0G2JLL6 359 aaPredicted RBP26.45■■□□□ 1.82
TRAF4-204ENST00000422344 PRRT2Q7Z6L0 340 aaPredicted RBP26.45■■□□□ 1.82
TRAF4-204ENST00000422344 CCDC84Q86UT8 332 aaPredicted RBP26.45■■□□□ 1.82
TRAF4-204ENST00000422344 MYH1P12882 1939 aa26.45■■□□□ 1.82
TRAF4-204ENST00000422344 MOGSQ13724 837 aa26.44■■□□□ 1.82
TRAF4-204ENST00000422344 METTL16Q86W50 562 aaKnown RBP26.44■■□□□ 1.82
TRAF4-204ENST00000422344 LCORLQ8N3X6 602 aa26.44■■□□□ 1.82
TRAF4-204ENST00000422344 PARK7Q99497 189 aaKnown RBP26.44■■□□□ 1.82
TRAF4-204ENST00000422344 AS3MTQ9HBK9 375 aa26.44■■□□□ 1.82
TRAF4-204ENST00000422344 ATAD5Q96QE3 1844 aa26.44■■□□□ 1.82
TRAF4-204ENST00000422344 USP17L5A8MUK1 530 aa26.43■■□□□ 1.82
TRAF4-204ENST00000422344 POLR3DP05423 398 aaPredicted RBP26.43■■□□□ 1.82
TRAF4-204ENST00000422344 ASNSP08243 561 aa26.43■■□□□ 1.82
TRAF4-204ENST00000422344 RRP1BQ14684 758 aaKnown RBP26.43■■□□□ 1.82
TRAF4-204ENST00000422344 TSHZ3Q63HK5 1081 aa26.43■■□□□ 1.82
TRAF4-204ENST00000422344 DNAJC18Q9H819 358 aa26.43■■□□□ 1.82
TRAF4-204ENST00000422344 ARMT1Q9H993 441 aa26.43■■□□□ 1.82
TRAF4-204ENST00000422344 CPA4Q9UI42 421 aa26.43■■□□□ 1.82
TRAF4-204ENST00000422344 SERPINB13Q9UIV8 391 aa26.43■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms