RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 GJC2Q5T442 439 aaPredicted RBP15.19■□□□□ 0.02
UFD1-203ENST00000421968 HHIPL2Q6UWX4 724 aa15.19■□□□□ 0.02
UFD1-203ENST00000421968 VPS37DQ86XT2 251 aa15.19■□□□□ 0.02
UFD1-203ENST00000421968 PROCA1Q8NCQ7 364 aaPredicted RBP15.19■□□□□ 0.02
UFD1-203ENST00000421968 PBX4Q9BYU1 374 aa15.19■□□□□ 0.02
UFD1-203ENST00000421968 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.19■□□□□ 0.02
UFD1-203ENST00000421968 MORF4L1Q9UBU8 362 aa15.19■□□□□ 0.02
UFD1-203ENST00000421968 CHMP3Q9Y3E7 222 aa15.19■□□□□ 0.02
UFD1-203ENST00000421968 DAGLAQ9Y4D2 1042 aa15.19■□□□□ 0.02
UFD1-203ENST00000421968 PHIPQ8WWQ0 1821 aa15.19■□□□□ 0.02
UFD1-203ENST00000421968 ELL2O00472 640 aaPredicted RBP15.18■□□□□ 0.02
UFD1-203ENST00000421968 FPGSQ05932 587 aa15.18■□□□□ 0.02
UFD1-203ENST00000421968 UBE4AQ14139 1066 aa15.18■□□□□ 0.02
UFD1-203ENST00000421968 SKIV2LQ15477 1246 aaKnown RBP15.18■□□□□ 0.02
UFD1-203ENST00000421968 USP6NLQ92738 828 aa15.18■□□□□ 0.02
UFD1-203ENST00000421968 SPINK5Q9NQ38 1064 aaPredicted RBP15.18■□□□□ 0.02
UFD1-203ENST00000421968 CNNM1Q9NRU3 951 aa15.18■□□□□ 0.02
UFD1-203ENST00000421968 KBTBD13C9JR72 458 aa15.17■□□□□ 0.02
UFD1-203ENST00000421968 CTNND1O60716 968 aaKnown RBP15.17■□□□□ 0.02
UFD1-203ENST00000421968 RAG1P15918 1043 aa15.17■□□□□ 0.02
UFD1-203ENST00000421968 GCKRQ14397 625 aa15.17■□□□□ 0.02
UFD1-203ENST00000421968 SNX17Q15036 470 aa15.17■□□□□ 0.02
UFD1-203ENST00000421968 MFSD14CQ5VZR4 134 aa15.17■□□□□ 0.02
UFD1-203ENST00000421968 LDHAL6AQ6ZMR3 332 aa15.17■□□□□ 0.02
UFD1-203ENST00000421968 CCAR1Q8IX12 1150 aaKnown RBP15.17■□□□□ 0.02
UFD1-203ENST00000421968 ARRDC4Q8NCT1 418 aa15.17■□□□□ 0.02
UFD1-203ENST00000421968 UIMC1Q96RL1 719 aa15.17■□□□□ 0.02
UFD1-203ENST00000421968 APBA2Q99767 749 aa15.17■□□□□ 0.02
UFD1-203ENST00000421968 TACC3Q9Y6A5 838 aa15.17■□□□□ 0.02
UFD1-203ENST00000421968 DOCK1Q14185 1865 aa15.16■□□□□ 0.02
UFD1-203ENST00000421968 GRXCR1A8MXD5 290 aa15.16■□□□□ 0.02
UFD1-203ENST00000421968 PRR33A8MZF0 331 aa15.16■□□□□ 0.02
UFD1-203ENST00000421968 PEX10O60683 326 aa15.16■□□□□ 0.02
UFD1-203ENST00000421968 MYCNP04198 464 aaPredicted RBP15.16■□□□□ 0.02
UFD1-203ENST00000421968 MAPK4P31152 587 aa15.16■□□□□ 0.02
UFD1-203ENST00000421968 TLE2Q04725 743 aa15.16■□□□□ 0.02
UFD1-203ENST00000421968 TAF7LQ5H9L4 462 aa15.16■□□□□ 0.02
UFD1-203ENST00000421968 CDC42EP5Q6NZY7 148 aa15.16■□□□□ 0.02
UFD1-203ENST00000421968 ZFPM1Q8IX07 1006 aa15.16■□□□□ 0.02
UFD1-203ENST00000421968 GPRC5AQ8NFJ5 357 aa15.16■□□□□ 0.02
UFD1-203ENST00000421968 ZNF594Q96JF6 807 aaPredicted RBP15.16■□□□□ 0.02
UFD1-203ENST00000421968 FAM198AQ9UFP1 575 aa15.16■□□□□ 0.02
UFD1-203ENST00000421968 CHD9Q3L8U1 2897 aa15.16■□□□□ 0.02
UFD1-203ENST00000421968 PI4K2BG5E9Z4 385 aa15.15■□□□□ 0.02
UFD1-203ENST00000421968 ERC2O15083 957 aa15.15■□□□□ 0.02
UFD1-203ENST00000421968 HMGCS2P54868 508 aa15.15■□□□□ 0.02
UFD1-203ENST00000421968 CASP7P55210 303 aa15.15■□□□□ 0.02
UFD1-203ENST00000421968 SPP2Q13103 211 aa15.15■□□□□ 0.02
UFD1-203ENST00000421968 MORN1Q5T089 497 aa15.15■□□□□ 0.02
UFD1-203ENST00000421968 MYBBP1AQ9BQG0 1328 aaKnown RBP15.15■□□□□ 0.02
UFD1-203ENST00000421968 XIRP2A4UGR9 3374 aa15.15■□□□□ 0.02
UFD1-203ENST00000421968 ATRNL1Q5VV63 1379 aa15.14■□□□□ 0.01
UFD1-203ENST00000421968 CLTBP09497 229 aa15.14■□□□□ 0.01
UFD1-203ENST00000421968 IRX3P78415 501 aaPredicted RBP15.14■□□□□ 0.01
UFD1-203ENST00000421968 FOXK2Q01167 660 aa15.14■□□□□ 0.01
UFD1-203ENST00000421968 GPR142Q7Z601 462 aa15.14■□□□□ 0.01
UFD1-203ENST00000421968 FBXO33Q7Z6M2 555 aa15.14■□□□□ 0.01
UFD1-203ENST00000421968 FERMT2Q96AC1 680 aa15.14■□□□□ 0.01
UFD1-203ENST00000421968 FBXL18Q96ME1 805 aa15.14■□□□□ 0.01
UFD1-203ENST00000421968 MBIPQ9NS73 344 aa15.14■□□□□ 0.01
UFD1-203ENST00000421968 SUGT1Q9Y2Z0 365 aa15.14■□□□□ 0.01
UFD1-203ENST00000421968 DOCK2Q92608 1830 aa15.14■□□□□ 0.01
UFD1-203ENST00000421968 UTYO14607 1347 aa15.14■□□□□ 0.01
UFD1-203ENST00000421968 SLURP2P0DP57 97 aa15.13■□□□□ 0.01
UFD1-203ENST00000421968 ADCYAP1R1P41586 468 aa15.13■□□□□ 0.01
UFD1-203ENST00000421968 PLEKHH3Q7Z736 793 aa15.13■□□□□ 0.01
UFD1-203ENST00000421968 ZSCAN29Q8IWY8 852 aaPredicted RBP15.13■□□□□ 0.01
UFD1-203ENST00000421968 CWC22Q9HCG8 908 aaKnown RBP15.13■□□□□ 0.01
UFD1-203ENST00000421968 TXNRD2Q9NNW7 524 aa15.13■□□□□ 0.01
UFD1-203ENST00000421968 USP40Q9NVE5 1235 aa15.13■□□□□ 0.01
UFD1-203ENST00000421968 FLRT1Q9NZU1 646 aa15.13■□□□□ 0.01
UFD1-203ENST00000421968 MSRAQ9UJ68 235 aa15.13■□□□□ 0.01
UFD1-203ENST00000421968 PRRC2BQ5JSZ5 2229 aaKnown RBP15.13■□□□□ 0.01
UFD1-203ENST00000421968 LOC285556D6RIA3 1793 aa15.13■□□□□ 0.01
UFD1-203ENST00000421968 KIAA0355O15063 1070 aa15.12■□□□□ 0.01
UFD1-203ENST00000421968 TLL1O43897 1013 aa15.12■□□□□ 0.01
UFD1-203ENST00000421968 MAP2K5Q13163 448 aa15.12■□□□□ 0.01
UFD1-203ENST00000421968 CCDC57Q2TAC2 916 aa15.12■□□□□ 0.01
UFD1-203ENST00000421968 C1orf53Q5VUE5 145 aa15.12■□□□□ 0.01
UFD1-203ENST00000421968 CCDC30Q5VVM6 783 aa15.12■□□□□ 0.01
UFD1-203ENST00000421968 HERVK_113Q902F9 699 aa15.12■□□□□ 0.01
UFD1-203ENST00000421968 EDC3Q96F86 508 aaKnown RBP15.12■□□□□ 0.01
UFD1-203ENST00000421968 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.12■□□□□ 0.016e-7■■□□□ 14.1
UFD1-203ENST00000421968 PORCNQ9H237 461 aa15.12■□□□□ 0.01
UFD1-203ENST00000421968 TRIM35Q9UPQ4 493 aa15.12■□□□□ 0.01
UFD1-203ENST00000421968 LRRC37A2A6NM11 1700 aa15.12■□□□□ 0.01
UFD1-203ENST00000421968 REV3LO60673 3130 aa15.11■□□□□ 0.01
UFD1-203ENST00000421968 ATP2B2Q01814 1243 aa15.11■□□□□ 0.01
UFD1-203ENST00000421968 RAB30Q15771 203 aa15.11■□□□□ 0.01
UFD1-203ENST00000421968 CAVIN4Q5BKX8 364 aa15.11■□□□□ 0.01
UFD1-203ENST00000421968 ZNF280CQ8ND82 737 aa15.11■□□□□ 0.01
UFD1-203ENST00000421968 MYH16Q9H6N6 1097 aa15.11■□□□□ 0.01
UFD1-203ENST00000421968 SPTBN4Q9H254 2564 aa15.11■□□□□ 0.01
UFD1-203ENST00000421968 RGS3P49796 1198 aa15.1■□□□□ 0.01
UFD1-203ENST00000421968 FOXO4P98177 505 aa15.1■□□□□ 0.01
UFD1-203ENST00000421968 MAP3K10Q02779 954 aa15.1■□□□□ 0.01
UFD1-203ENST00000421968 CSPP1Q1MSJ5 1256 aa15.1■□□□□ 0.01
UFD1-203ENST00000421968 Q3C1V9 767 aa15.1■□□□□ 0.01
UFD1-203ENST00000421968 ANO1Q5XXA6 986 aa15.1■□□□□ 0.01
UFD1-203ENST00000421968 KCNH6Q9H252 994 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms