RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 RASGRP2Q7LDG7 609 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 VAT1LQ9HCJ6 419 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 KIF1AQ12756 1690 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 RFX7Q2KHR2 1363 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 YEATS4O95619 227 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 FGFR2P21802 821 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 ARID4AP29374 1257 aaPredicted RBP15.35■□□□□ 0.05
MCF2L-213ENST00000421756 DIXDC1Q155Q3 683 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 NOSTRINQ8IVI9 506 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 DYNLL2Q96FJ2 89 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 CDC5LQ99459 802 aaKnown RBP15.35■□□□□ 0.05
MCF2L-213ENST00000421756 BLZF1Q9H2G9 400 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 BCL9O00512 1426 aa15.35■□□□□ 0.05
MCF2L-213ENST00000421756 PHRF1Q9P1Y6 1649 aaKnown RBP15.34■□□□□ 0.05
MCF2L-213ENST00000421756 NTRK3Q16288 839 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 JMYQ8N9B5 988 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 TMEM87BQ96K49 555 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 MCM9Q9NXL9 1143 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 VWA3AA6NCI4 1184 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 WNT7AO00755 349 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 TPM3P06753 285 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 ADKP55263 362 aaKnown RBP15.34■□□□□ 0.05
MCF2L-213ENST00000421756 LINC00116Q8NCU8 138 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 GPKOWQ92917 476 aaPredicted RBP eCLIP15.34■□□□□ 0.05
MCF2L-213ENST00000421756 SPTLC3Q9NUV7 552 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 ZNF142P52746 1687 aaPredicted RBP15.34■□□□□ 0.05
MCF2L-213ENST00000421756 TSPY2A6NKD2 308 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 NTSR2O95665 410 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 CMA1P23946 247 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 PRIMPOLQ96LW4 560 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 KRT23Q9C075 422 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 ZSWIM4Q9H7M6 989 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 GNL3LQ9NVN8 582 aaKnown RBP15.34■□□□□ 0.05
MCF2L-213ENST00000421756 STX8Q9UNK0 236 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 USP54Q70EL1 1684 aa15.34■□□□□ 0.05
MCF2L-213ENST00000421756 F8W031 263 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-213ENST00000421756 GOLGA8HP0CJ92 632 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 MCM7P33993 719 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 SLC44A5Q8NCS7 719 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 N4BP2Q86UW6 1770 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-213ENST00000421756 ZPR1O75312 459 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 USP17L8P0C7I0 530 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 TOB1P50616 345 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-213ENST00000421756 METTL16Q86W50 562 aaKnown RBP15.33■□□□□ 0.04
MCF2L-213ENST00000421756 AMIGO3Q86WK7 504 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 UBE2Q2Q8WVN8 375 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 CSRNP2Q9H175 543 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 MINPP1Q9UNW1 487 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 ERVV-1B6SEH8 477 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 NBPF11Q86T75 865 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 KRI1Q8N9T8 703 aaKnown RBP15.33■□□□□ 0.04
MCF2L-213ENST00000421756 ESR2Q92731 530 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 SETDB2Q96T68 719 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 FBXO3Q9UK99 471 aa15.33■□□□□ 0.04
MCF2L-213ENST00000421756 ZNF215Q9UL58 517 aaPredicted RBP15.33■□□□□ 0.04
MCF2L-213ENST00000421756 ERCC3P19447 782 aa15.32■□□□□ 0.04
MCF2L-213ENST00000421756 NLRP12P59046 1061 aa15.32■□□□□ 0.04
MCF2L-213ENST00000421756 CRYBG1Q9Y4K1 1723 aa15.32■□□□□ 0.04
MCF2L-213ENST00000421756 DCCP43146 1447 aa15.32■□□□□ 0.04
MCF2L-213ENST00000421756 ADAMTS3O15072 1205 aa15.32■□□□□ 0.04
MCF2L-213ENST00000421756 ARMCX5Q6P1M9 558 aa15.32■□□□□ 0.04
MCF2L-213ENST00000421756 PIK3AP1Q6ZUJ8 805 aa15.32■□□□□ 0.04
MCF2L-213ENST00000421756 ENAHQ8N8S7 591 aaPredicted RBP15.32■□□□□ 0.04
MCF2L-213ENST00000421756 DZIP1Q86YF9 867 aaKnown RBP15.31■□□□□ 0.04
MCF2L-213ENST00000421756 FAM84BQ96KN1 310 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-213ENST00000421756 DESI2Q9BSY9 194 aa15.31■□□□□ 0.04
MCF2L-213ENST00000421756 SAMSN1Q9NSI8 373 aaKnown RBP15.31■□□□□ 0.04
MCF2L-213ENST00000421756 CRACR2BQ8N4Y2 399 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-213ENST00000421756 DNAI1Q9UI46 699 aa15.31■□□□□ 0.04
MCF2L-213ENST00000421756 ZHX1Q9UKY1 873 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-213ENST00000421756 ZNF652Q9Y2D9 606 aa15.31■□□□□ 0.04
MCF2L-213ENST00000421756 MYO5AQ9Y4I1 1855 aaKnown RBP15.31■□□□□ 0.04
MCF2L-213ENST00000421756 A0A1W2PQ27 194 aa15.31■□□□□ 0.04
MCF2L-213ENST00000421756 A0A1W2PQ64 194 aa15.31■□□□□ 0.04
MCF2L-213ENST00000421756 A0A1W2PQD8 194 aa15.31■□□□□ 0.04
MCF2L-213ENST00000421756 TULP1O00294 542 aaPredicted RBP15.31■□□□□ 0.04
MCF2L-213ENST00000421756 USP5P45974 858 aa15.31■□□□□ 0.04
MCF2L-213ENST00000421756 CATIPQ7Z7H3 387 aa15.31■□□□□ 0.04
MCF2L-213ENST00000421756 IQCA1Q86XH1 822 aa15.31■□□□□ 0.04
MCF2L-213ENST00000421756 NLRP5P59047 1200 aa15.3■□□□□ 0.04
MCF2L-213ENST00000421756 PTPAQ15257 358 aa15.3■□□□□ 0.04
MCF2L-213ENST00000421756 LRRN4CLQ8ND94 238 aa15.3■□□□□ 0.04
MCF2L-213ENST00000421756 NLRP3Q96P20 1036 aa15.3■□□□□ 0.04
MCF2L-213ENST00000421756 NFE2L3Q9Y4A8 694 aa15.3■□□□□ 0.04
MCF2L-213ENST00000421756 MMP1P03956 469 aa15.3■□□□□ 0.04
MCF2L-213ENST00000421756 TOP1P11387 765 aaKnown RBP15.3■□□□□ 0.04
MCF2L-213ENST00000421756 EIF6P56537 245 aaKnown RBP15.3■□□□□ 0.04
MCF2L-213ENST00000421756 RPS8P62241 208 aaKnown RBP15.3■□□□□ 0.04
MCF2L-213ENST00000421756 MECOMQ03112 1051 aa15.3■□□□□ 0.04
MCF2L-213ENST00000421756 KRBA2Q6ZNG9 492 aa15.3■□□□□ 0.04
MCF2L-213ENST00000421756 EPC1Q9H2F5 836 aa15.3■□□□□ 0.04
MCF2L-213ENST00000421756 CNNM2Q9H8M5 875 aa15.3■□□□□ 0.04
MCF2L-213ENST00000421756 EVCP57679 992 aa15.3■□□□□ 0.04
MCF2L-213ENST00000421756 FMNL1O95466 1100 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-213ENST00000421756 CCZ1BP86790 482 aa15.29■□□□□ 0.04
MCF2L-213ENST00000421756 CCZ1P86791 482 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-213ENST00000421756 FMR1Q06787 632 aaKnown RBP eCLIP15.29■□□□□ 0.04
MCF2L-213ENST00000421756 KARSQ15046 597 aaKnown RBP15.29■□□□□ 0.04
MCF2L-213ENST00000421756 MRFAP1L1Q96HT8 127 aa15.29■□□□□ 0.04
MCF2L-213ENST00000421756 USP17L3A6NCW0 530 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms