RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 AS3MTQ9HBK9 375 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 GINM1Q9NU53 330 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 DENND2AQ9ULE3 1009 aa8.33□□□□□ -1.08
PMS1-208ENST00000421722 F6X3S4 739 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 TNFRSF10AO00220 468 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 RGS2P41220 211 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 PDE3AQ14432 1141 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 TJAP1Q5JTD0 557 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 SH3BP5LQ7L8J4 393 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 ZNF280CQ8ND82 737 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 ASCC2Q9H1I8 757 aaPredicted RBP8.32□□□□□ -1.08
PMS1-208ENST00000421722 FBXO3Q9UK99 471 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 PDS5AQ29RF7 1337 aaKnown RBP8.32□□□□□ -1.08
PMS1-208ENST00000421722 LTBP2Q14767 1821 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 TRIM75PA6NK02 468 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 MSCO60682 206 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 HOXA7P31268 230 aaPredicted RBP8.32□□□□□ -1.08
PMS1-208ENST00000421722 CACNB2Q08289 660 aaPredicted RBP8.32□□□□□ -1.08
PMS1-208ENST00000421722 WDR63Q8IWG1 891 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 ANKRD44Q8N8A2 993 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 WDR18Q9BV38 432 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 PRKAG2Q9UGJ0 569 aa8.32□□□□□ -1.08
PMS1-208ENST00000421722 FRMPD3Q5JV73 1810 aa8.31□□□□□ -1.08
PMS1-208ENST00000421722 USP17L5A8MUK1 530 aa8.31□□□□□ -1.08
PMS1-208ENST00000421722 CYP2B6P20813 491 aa8.31□□□□□ -1.08
PMS1-208ENST00000421722 PLA2G5P39877 138 aa8.31□□□□□ -1.08
PMS1-208ENST00000421722 DIXDC1Q155Q3 683 aa8.31□□□□□ -1.08
PMS1-208ENST00000421722 MORN1Q5T089 497 aa8.31□□□□□ -1.08
PMS1-208ENST00000421722 SPTY2D1Q68D10 685 aaPredicted RBP8.31□□□□□ -1.08
PMS1-208ENST00000421722 GPRC5AQ8NFJ5 357 aa8.31□□□□□ -1.08
PMS1-208ENST00000421722 FANCIQ9NVI1 1328 aa8.31□□□□□ -1.08
PMS1-208ENST00000421722 DOCK3Q8IZD9 2030 aa8.31□□□□□ -1.08
PMS1-208ENST00000421722 EYA2O00167 538 aa8.31□□□□□ -1.08
PMS1-208ENST00000421722 MFSD14CQ5VZR4 134 aa8.31□□□□□ -1.08
PMS1-208ENST00000421722 ZSCAN29Q8IWY8 852 aaPredicted RBP8.31□□□□□ -1.08
PMS1-208ENST00000421722 APBA2Q99767 749 aa8.31□□□□□ -1.08
PMS1-208ENST00000421722 BICC1Q9H694 974 aaKnown RBP8.31□□□□□ -1.08
PMS1-208ENST00000421722 DDTLA6NHG4 134 aaPredicted RBP8.3□□□□□ -1.08
PMS1-208ENST00000421722 DNM1LO00429 736 aa8.3□□□□□ -1.08
PMS1-208ENST00000421722 SPP2Q13103 211 aa8.3□□□□□ -1.08
PMS1-208ENST00000421722 PLEKHH3Q7Z736 793 aa8.3□□□□□ -1.08
PMS1-208ENST00000421722 XPO5Q9HAV4 1204 aaKnown RBP eCLIP8.3□□□□□ -1.08
PMS1-208ENST00000421722 ARIH1Q9Y4X5 557 aaPredicted RBP8.3□□□□□ -1.08
PMS1-208ENST00000421722 C19orf81C9J6K1 198 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 GLRX3O76003 335 aaKnown RBP8.29□□□□□ -1.08
PMS1-208ENST00000421722 FOSL2P15408 326 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 PRDX5P30044 214 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 RTP1P59025 263 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 IRX3P78415 501 aaPredicted RBP8.29□□□□□ -1.08
PMS1-208ENST00000421722 MYLIPQ8WY64 445 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 LPAR1Q92633 364 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 FAM122AQ96E09 287 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 PRKRIP1Q9H875 184 aaPredicted RBP8.29□□□□□ -1.08
PMS1-208ENST00000421722 TMOD4Q9NZQ9 345 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 ATAD5Q96QE3 1844 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 MYH2Q9UKX2 1941 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 CIAO1O76071 339 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 CCND3P30281 292 aaPredicted RBP8.29□□□□□ -1.08
PMS1-208ENST00000421722 CAP2P40123 477 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 EXOSC9Q06265 439 aaKnown RBP8.29□□□□□ -1.08
PMS1-208ENST00000421722 SHHQ15465 462 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 FAM161BQ96MY7 647 aa8.29□□□□□ -1.08
PMS1-208ENST00000421722 DDX20Q9UHI6 824 aaKnown RBP8.29□□□□□ -1.08
PMS1-208ENST00000421722 HERC5Q9UII4 1024 aaKnown RBP8.29□□□□□ -1.08
PMS1-208ENST00000421722 MROH7-TTC4A0A0A0MT08 1334 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 GPR75-ASB3A0A0A6YYF3 556 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 SLC15A5A6NIM6 579 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 LDHCP07864 332 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 RFX5P48382 616 aaPredicted RBP8.28□□□□□ -1.08
PMS1-208ENST00000421722 HMGCS2P54868 508 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 MAP2K5Q13163 448 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 SNX17Q15036 470 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 ARRDC4Q8NCT1 418 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 SENP6Q9GZR1 1112 aaPredicted RBP8.28□□□□□ -1.08
PMS1-208ENST00000421722 TTYH1Q9H313 450 aaPredicted RBP8.28□□□□□ -1.08
PMS1-208ENST00000421722 HOXC6P09630 235 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 NBPF7P0C2Y1 421 aaPredicted RBP8.28□□□□□ -1.08
PMS1-208ENST00000421722 HERVK_113P62684 666 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 GSTO1P78417 241 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 ATP2B3Q16720 1220 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 C1orf53Q5VUE5 145 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 GPR142Q7Z601 462 aa8.28□□□□□ -1.08
PMS1-208ENST00000421722 DZIP1Q86YF9 867 aaKnown RBP8.28□□□□□ -1.08
PMS1-208ENST00000421722 ATXN2LQ8WWM7 1075 aaKnown RBP8.28□□□□□ -1.08
PMS1-208ENST00000421722 P2RX7Q99572 595 aaKnown RBP8.28□□□□□ -1.08
PMS1-208ENST00000421722 DDX4Q9NQI0 724 aaKnown RBP8.28□□□□□ -1.08
PMS1-208ENST00000421722 BTDP43251 543 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 BACE1P56817 501 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 ERVK-9P63128 1117 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 ERVK-24P63145 666 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 CCNA1P78396 465 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 SLC4A10Q6U841 1118 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 CCAR1Q8IX12 1150 aaKnown RBP8.27□□□□□ -1.09
PMS1-208ENST00000421722 EDC3Q96F86 508 aaKnown RBP8.27□□□□□ -1.09
PMS1-208ENST00000421722 RBPJLQ9UBG7 517 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 IGHA2P01877 340 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 RHBDL3P58872 404 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 DDX10Q13206 875 aaKnown RBP8.27□□□□□ -1.09
PMS1-208ENST00000421722 AKNAD1Q5T1N1 836 aa8.27□□□□□ -1.09
PMS1-208ENST00000421722 SLC39A5Q6ZMH5 540 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms