RNA–Protein interactions for RNA: ENST00000421523.5

HDAC8-212, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-212ENST00000421523 IL1R1P14778 569 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 GNAI1P63096 354 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 CHRNDQ07001 517 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 CCL14Q16627 93 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 TREML2Q5T2D2 321 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 GJC2Q5T442 439 aaPredicted RBP7.2□□□□□ -1.26
HDAC8-212ENST00000421523 TSPYL6Q8N831 410 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 ANKS1AQ92625 1134 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 CD320Q9NPF0 282 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 CWC25Q9NXE8 425 aaPredicted RBP7.2□□□□□ -1.26
HDAC8-212ENST00000421523 SLC45A1Q9Y2W3 748 aa7.2□□□□□ -1.26
HDAC8-212ENST00000421523 RPAP1Q9BWH6 1393 aaPredicted RBP7.2□□□□□ -1.26
HDAC8-212ENST00000421523 DMXL1Q9Y485 3027 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 PTPRFP10586 1907 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 MYH3P11055 1940 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 RLFQ13129 1914 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 DNM1LO00429 736 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 ELL2O00472 640 aaPredicted RBP7.19□□□□□ -1.26
HDAC8-212ENST00000421523 TLL1O43897 1013 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 CNGA1P29973 690 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 FPGSQ05932 587 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 CCDC27Q2M243 656 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 NOL9Q5SY16 702 aaKnown RBP7.19□□□□□ -1.26
HDAC8-212ENST00000421523 SLC39A5Q6ZMH5 540 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 CCDC191Q8NCU4 936 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 TTLL11Q8NHH1 800 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 MPHOSPH8Q99549 860 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 METTL22Q9BUU2 404 aaPredicted RBP7.19□□□□□ -1.26
HDAC8-212ENST00000421523 PICK1Q9NRD5 415 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.19□□□□□ -1.26
HDAC8-212ENST00000421523 PNMA3Q9UL41 463 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 DAGLAQ9Y4D2 1042 aa7.19□□□□□ -1.26
HDAC8-212ENST00000421523 PEX10O60683 326 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 IGKV5-2P06315 115 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 RAG1P15918 1043 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 GOLGA2Q08379 1002 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 TCP10Q12799 353 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 GRIK5Q16478 980 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 CCDC84Q86UT8 332 aaPredicted RBP7.18□□□□□ -1.26
HDAC8-212ENST00000421523 FAM83AQ86UY5 434 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 SOCS4Q8WXH5 440 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 FERMT2Q96AC1 680 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 NUDT12Q9BQG2 462 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 NKX2-4Q9H2Z4 354 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 DDX20Q9UHI6 824 aaKnown RBP7.18□□□□□ -1.26
HDAC8-212ENST00000421523 ZNF112Q9UJU3 913 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 AGTPBP1Q9UPW5 1226 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 ZNF318Q5VUA4 2279 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 CHD6Q8TD26 2715 aa7.18□□□□□ -1.26
HDAC8-212ENST00000421523 PRRC2BQ5JSZ5 2229 aaKnown RBP7.17□□□□□ -1.26
HDAC8-212ENST00000421523 KBTBD13C9JR72 458 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 GFRA3O60609 400 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 PTPRAP18433 802 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 ITGA6P23229 1130 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 SSTR3P32745 418 aaPredicted RBP7.17□□□□□ -1.26
HDAC8-212ENST00000421523 TLE2Q04725 743 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 CALD1Q05682 793 aaKnown RBP7.17□□□□□ -1.26
HDAC8-212ENST00000421523 CCDC30Q5VVM6 783 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 ANO1Q5XXA6 986 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 KSR2Q6VAB6 950 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 WWC1Q8IX03 1113 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 HERVK_113Q902F9 699 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 LPAR1Q92633 364 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 TEKT1Q969V4 418 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.17□□□□□ -1.267e-6■■□□□ 11.5
HDAC8-212ENST00000421523 MSRAQ9UJ68 235 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 AFG3L2Q9Y4W6 797 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 DNAH14Q0VDD8 3507 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 A0A1B0GUL6 1792 aa7.17□□□□□ -1.26
HDAC8-212ENST00000421523 A0A0G2JMZ2 1700 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 PHIPQ8WWQ0 1821 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 GBF1Q92538 1859 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 PI4KAP2A4QPH2 592 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 H7C1W4 665 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 PQBP1O60828 265 aaKnown RBP7.16□□□□□ -1.26
HDAC8-212ENST00000421523 CLTBP09497 229 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 XRCC5P13010 732 aaKnown RBP7.16□□□□□ -1.26
HDAC8-212ENST00000421523 ADCYAP1R1P41586 468 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 GCLCP48506 637 aaPredicted RBP7.16□□□□□ -1.26
HDAC8-212ENST00000421523 CASP7P55210 303 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 CHAF1AQ13111 956 aaPredicted RBP7.16□□□□□ -1.26
HDAC8-212ENST00000421523 G2E3Q7L622 706 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 TRMT44Q8IYL2 757 aaKnown RBP7.16□□□□□ -1.26
HDAC8-212ENST00000421523 SCYL3Q8IZE3 742 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 PI4KAP1Q8N8J0 262 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 TSR2Q969E8 191 aaKnown RBP7.16□□□□□ -1.26
HDAC8-212ENST00000421523 APBA2Q99767 749 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 KCNH6Q9H252 994 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 SLC28A3Q9HAS3 691 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 MAP3K2Q9Y2U5 619 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 ANKRD11Q6UB99 2663 aaPredicted RBP7.16□□□□□ -1.26
HDAC8-212ENST00000421523 ATRXP46100 2492 aa7.16□□□□□ -1.26
HDAC8-212ENST00000421523 NEURL1BA8MQ27 555 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 PLIN1O60240 522 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 RGS2P41220 211 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 SNX17Q15036 470 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 RAB30Q15771 203 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 PPP2R2DQ66LE6 453 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 KRT40Q6A162 431 aa7.15□□□□□ -1.26
HDAC8-212ENST00000421523 C15orf52Q6ZUT6 534 aaKnown RBP7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms