RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 ZNF654Q8IZM8 581 aa16.71■□□□□ 0.26
AP000550.1-201ENST00000420508 THRAP3Q9Y2W1 955 aaKnown RBP16.71■□□□□ 0.26
AP000550.1-201ENST00000420508 TNS3Q68CZ2 1445 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 SYNRGQ9UMZ2 1314 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 PPP6R2O75170 966 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 CCDC94Q9BW85 323 aaPredicted RBP16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 GCOM1H8Y6P7 765 aaPredicted RBP16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 MYZAPP0CAP1 466 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 KRT13P13646 458 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 RPS8P62241 208 aaKnown RBP16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 UBXN1Q04323 297 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 CCDC42Q96M95 316 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 POLR3EQ9NVU0 708 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 TCERG1LQ5VWI1 586 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 SYCP3Q8IZU3 236 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 FBXO18Q8NFZ0 1043 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 NEK11Q8NG66 645 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 MTA3Q9BTC8 594 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 JADE2Q9NQC1 790 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 RRAGDQ9NQL2 400 aaPredicted RBP16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 GOLGA6L10A0A0M3HER8 536 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 VWA3AA6NCI4 1184 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 FGAP02671 866 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 NONOQ15233 471 aaKnown RBP eCLIP16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 HAUS3Q68CZ6 603 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 FCHSD1Q86WN1 690 aa16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 V9GY48 417 aaPredicted RBP16.7■□□□□ 0.26
AP000550.1-201ENST00000420508 MATR3P43243 847 aaKnown RBP eCLIP16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 CBX1P83916 185 aa16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 SEPT7Q16181 437 aaKnown RBP16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 TMTC1Q8IUR5 882 aa16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 MAGEF1Q9HAY2 307 aa16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 KIF20BQ96Q89 1820 aa16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 MROH2AA6NES4 1674 aa16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 OVOS2A0A0G2JMS6 1433 aa16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 TRAPPC10P48553 1259 aa16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 ZRSR2Q15696 482 aaKnown RBP16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 TMC4Q7Z404 712 aa16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 TDRD7Q8NHU6 1098 aaKnown RBP16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 TMEM131LA2VDJ0 1609 aa16.69■□□□□ 0.26
AP000550.1-201ENST00000420508 RXRAP19793 462 aa16.68■□□□□ 0.26
AP000550.1-201ENST00000420508 PAK1Q13153 545 aa16.68■□□□□ 0.26
AP000550.1-201ENST00000420508 CYP26C1Q6V0L0 522 aa16.68■□□□□ 0.26
AP000550.1-201ENST00000420508 B4DLN1 442 aa16.68■□□□□ 0.26
AP000550.1-201ENST00000420508 IGSF3O75054 1194 aa16.68■□□□□ 0.26
AP000550.1-201ENST00000420508 UFL1O94874 794 aa16.68■□□□□ 0.26
AP000550.1-201ENST00000420508 GBP2P32456 591 aaPredicted RBP16.68■□□□□ 0.26
AP000550.1-201ENST00000420508 LRRC24Q50LG9 513 aa16.68■□□□□ 0.26
AP000550.1-201ENST00000420508 ZSCAN10Q96SZ4 725 aaPredicted RBP16.68■□□□□ 0.26
AP000550.1-201ENST00000420508 ATP8A2Q9NTI2 1148 aa16.68■□□□□ 0.26
AP000550.1-201ENST00000420508 ADAMTS13Q76LX8 1427 aa16.68■□□□□ 0.26
AP000550.1-201ENST00000420508 CDHR2Q9BYE9 1310 aa16.68■□□□□ 0.26
AP000550.1-201ENST00000420508 FAM193AP78312 1265 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 ZNF174Q15697 407 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 ARHGEF28Q8N1W1 1705 aaKnown RBP16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 POLR2DO15514 142 aaKnown RBP16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 CYP21A2P08686 494 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 HS2ST1Q7LGA3 356 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 FOXP1Q9H334 677 aaPredicted RBP16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 SASH1O94885 1247 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 TNNI2P48788 182 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 CCDC174Q6PII3 467 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 FANCBQ8NB91 859 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 SUPT20HQ8NEM7 779 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 USP28Q96RU2 1077 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 ZKSCAN3Q9BRR0 538 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 OGFRQ9NZT2 677 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 RCOR1Q9UKL0 485 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 SCRN1Q12765 414 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 CTR9Q6PD62 1173 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 IGSF22Q8N9C0 903 aa16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 NUCKS1Q9H1E3 243 aaKnown RBP16.67■□□□□ 0.26
AP000550.1-201ENST00000420508 ATP2B4P23634 1241 aa16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 ADD2P35612 726 aa16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 FAM173BQ6P4H8 233 aa16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 NSUN7Q8NE18 718 aaKnown RBP16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 RNF26Q9BY78 433 aaPredicted RBP16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 OPA1O60313 960 aa16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 CTDSPL2Q05D32 466 aa16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 EDC3Q96F86 508 aaKnown RBP16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 CD2BP2O95400 341 aaKnown RBP16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 PFKFB1P16118 471 aa16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 RCAN1P53805 252 aa16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 PICALMQ13492 652 aa16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 CARMIL3Q8ND23 1372 aa16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 ADCK5Q3MIX3 580 aa16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 PIK3AP1Q6ZUJ8 805 aa16.66■□□□□ 0.26
AP000550.1-201ENST00000420508 LAD1O00515 517 aa16.65■□□□□ 0.26
AP000550.1-201ENST00000420508 HSF2BPO75031 334 aa16.65■□□□□ 0.26
AP000550.1-201ENST00000420508 NOP2P46087 812 aaKnown RBP16.65■□□□□ 0.26
AP000550.1-201ENST00000420508 SLC39A14Q15043 492 aa16.65■□□□□ 0.26
AP000550.1-201ENST00000420508 TSGA10IPQ3SY00 556 aa16.65■□□□□ 0.26
AP000550.1-201ENST00000420508 FLAD1Q8NFF5 587 aa16.65■□□□□ 0.26
AP000550.1-201ENST00000420508 V9GYY5 206 aaPredicted RBP16.65■□□□□ 0.26
AP000550.1-201ENST00000420508 ADCY7P51828 1080 aa16.65■□□□□ 0.26
AP000550.1-201ENST00000420508 IVLP07476 585 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 LIG1P18858 919 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 LIFRP42702 1097 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 IFFO1Q0D2I5 559 aa16.64■□□□□ 0.25
AP000550.1-201ENST00000420508 SYT10Q6XYQ8 523 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms