RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 VGLL4Q14135 290 aa24.77■■□□□ 1.56
HMGXB4-203ENST00000420166 SLC4A8Q2Y0W8 1093 aa24.77■■□□□ 1.56
HMGXB4-203ENST00000420166 SLC10A4Q96EP9 437 aa24.77■■□□□ 1.56
HMGXB4-203ENST00000420166 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.77■■□□□ 1.56
HMGXB4-203ENST00000420166 HERC5Q9UII4 1024 aaKnown RBP24.77■■□□□ 1.56
HMGXB4-203ENST00000420166 CSADQ9Y600 493 aa24.77■■□□□ 1.56
HMGXB4-203ENST00000420166 PHF20L1A8MW92 1017 aa24.76■■□□□ 1.55
HMGXB4-203ENST00000420166 HIP1O00291 1037 aa24.76■■□□□ 1.55
HMGXB4-203ENST00000420166 INPP5BP32019 993 aa24.76■■□□□ 1.55
HMGXB4-203ENST00000420166 TTC6Q86TZ1 520 aa24.76■■□□□ 1.55
HMGXB4-203ENST00000420166 METTL16Q86W50 562 aaKnown RBP24.76■■□□□ 1.55
HMGXB4-203ENST00000420166 FOXP4Q8IVH2 680 aaPredicted RBP24.76■■□□□ 1.55
HMGXB4-203ENST00000420166 DDRGK1Q96HY6 314 aa24.76■■□□□ 1.55
HMGXB4-203ENST00000420166 DIAPH3Q9NSV4 1193 aa24.76■■□□□ 1.55
HMGXB4-203ENST00000420166 DOCK1Q14185 1865 aa24.75■■□□□ 1.55
HMGXB4-203ENST00000420166 GSG1L2A8MUP6 293 aa24.75■■□□□ 1.55
HMGXB4-203ENST00000420166 POLR3DP05423 398 aaPredicted RBP24.75■■□□□ 1.55
HMGXB4-203ENST00000420166 CCDC129Q6ZRS4 1044 aa24.75■■□□□ 1.55
HMGXB4-203ENST00000420166 CRACR2BQ8N4Y2 399 aaPredicted RBP24.75■■□□□ 1.55
HMGXB4-203ENST00000420166 ZKSCAN4Q969J2 545 aaPredicted RBP24.75■■□□□ 1.55
HMGXB4-203ENST00000420166 EHD4Q9H223 541 aa24.75■■□□□ 1.55
HMGXB4-203ENST00000420166 NOGQ13253 232 aa24.74■■□□□ 1.55
HMGXB4-203ENST00000420166 MCMDC2Q4G0Z9 681 aa24.74■■□□□ 1.55
HMGXB4-203ENST00000420166 GIMAP6Q6P9H5 292 aa24.74■■□□□ 1.55
HMGXB4-203ENST00000420166 TRIM34Q9BYJ4 488 aa24.74■■□□□ 1.55
HMGXB4-203ENST00000420166 DNAJC18Q9H819 358 aa24.74■■□□□ 1.55
HMGXB4-203ENST00000420166 ELP3Q9H9T3 547 aa24.74■■□□□ 1.55
HMGXB4-203ENST00000420166 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.74■■□□□ 1.55
HMGXB4-203ENST00000420166 SNCAIPQ9Y6H5 919 aa24.74■■□□□ 1.55
HMGXB4-203ENST00000420166 ATAD5Q96QE3 1844 aa24.74■■□□□ 1.55
HMGXB4-203ENST00000420166 AOC2O75106 756 aa24.73■■□□□ 1.55
HMGXB4-203ENST00000420166 PLCD1P51178 756 aa24.73■■□□□ 1.55
HMGXB4-203ENST00000420166 NOL9Q5SY16 702 aaKnown RBP24.73■■□□□ 1.55
HMGXB4-203ENST00000420166 EPB41L4AQ9HCS5 686 aaPredicted RBP24.73■■□□□ 1.55
HMGXB4-203ENST00000420166 SERPINB13Q9UIV8 391 aa24.73■■□□□ 1.55
HMGXB4-203ENST00000420166 LAMB1P07942 1786 aa24.72■■□□□ 1.55
HMGXB4-203ENST00000420166 PATL2C9JE40 543 aaKnown RBP24.72■■□□□ 1.55
HMGXB4-203ENST00000420166 CYP2D6P10635 497 aa24.72■■□□□ 1.55
HMGXB4-203ENST00000420166 SPRYD7Q5W111 196 aa24.72■■□□□ 1.55
HMGXB4-203ENST00000420166 JMYQ8N9B5 988 aa24.72■■□□□ 1.55
HMGXB4-203ENST00000420166 WNK4Q96J92 1243 aa24.72■■□□□ 1.55
HMGXB4-203ENST00000420166 MYH8P13535 1937 aa24.71■■□□□ 1.55
HMGXB4-203ENST00000420166 USP17L12C9JPN9 530 aa24.71■■□□□ 1.55
HMGXB4-203ENST00000420166 USP17L21D6R901 530 aa24.71■■□□□ 1.55
HMGXB4-203ENST00000420166 CTNND1O60716 968 aaKnown RBP24.71■■□□□ 1.55
HMGXB4-203ENST00000420166 APPP05067 770 aa24.71■■□□□ 1.55
HMGXB4-203ENST00000420166 MAP2K2P36507 400 aa24.71■■□□□ 1.55
HMGXB4-203ENST00000420166 EVX2Q03828 476 aa24.71■■□□□ 1.55
HMGXB4-203ENST00000420166 CTR9Q6PD62 1173 aa24.71■■□□□ 1.55
HMGXB4-203ENST00000420166 CWC27Q6UX04 472 aaKnown RBP24.71■■□□□ 1.55
HMGXB4-203ENST00000420166 ZNF589Q86UQ0 364 aaPredicted RBP24.71■■□□□ 1.55
HMGXB4-203ENST00000420166 AMOTL1Q8IY63 956 aa24.71■■□□□ 1.55
HMGXB4-203ENST00000420166 CCDC171Q6TFL3 1326 aa24.7■■□□□ 1.54
HMGXB4-203ENST00000420166 SPDYE5A6NIY4 337 aa24.7■■□□□ 1.54
HMGXB4-203ENST00000420166 GABPAQ06546 454 aa24.7■■□□□ 1.54
HMGXB4-203ENST00000420166 BMP2KLQ5H9B9 411 aa24.7■■□□□ 1.54
HMGXB4-203ENST00000420166 C12orf60Q5U649 245 aa24.7■■□□□ 1.54
HMGXB4-203ENST00000420166 SCYL3Q8IZE3 742 aa24.7■■□□□ 1.54
HMGXB4-203ENST00000420166 CNKSR2Q8WXI2 1034 aa24.7■■□□□ 1.54
HMGXB4-203ENST00000420166 OPTNQ96CV9 577 aa24.7■■□□□ 1.54
HMGXB4-203ENST00000420166 ZIC5Q96T25 663 aa24.7■■□□□ 1.54
HMGXB4-203ENST00000420166 NACAP1Q9BZK3 213 aa24.7■■□□□ 1.54
HMGXB4-203ENST00000420166 ARPP21Q9UBL0 812 aaPredicted RBP24.7■■□□□ 1.54
HMGXB4-203ENST00000420166 CYP2D7A0A087X1C5 515 aa24.69■■□□□ 1.54
HMGXB4-203ENST00000420166 FOXP2O15409 715 aa24.69■■□□□ 1.54
HMGXB4-203ENST00000420166 ZBTB48P10074 688 aaPredicted RBP24.69■■□□□ 1.54
HMGXB4-203ENST00000420166 GJA5P36382 358 aa24.69■■□□□ 1.54
HMGXB4-203ENST00000420166 TDO2P48775 406 aa24.69■■□□□ 1.54
HMGXB4-203ENST00000420166 MKRN3Q13064 507 aaKnown RBP24.69■■□□□ 1.54
HMGXB4-203ENST00000420166 RRP1BQ14684 758 aaKnown RBP24.69■■□□□ 1.54
HMGXB4-203ENST00000420166 SBK1Q52WX2 424 aa24.69■■□□□ 1.54
HMGXB4-203ENST00000420166 ERO1BQ86YB8 467 aa24.69■■□□□ 1.54
HMGXB4-203ENST00000420166 IFNL3Q8IZI9 196 aa24.69■■□□□ 1.54
HMGXB4-203ENST00000420166 CHMLP26374 656 aa24.68■■□□□ 1.54
HMGXB4-203ENST00000420166 MFAP1P55081 439 aaKnown RBP24.68■■□□□ 1.54
HMGXB4-203ENST00000420166 OTUD5Q96G74 571 aa24.68■■□□□ 1.54
HMGXB4-203ENST00000420166 TAOK2Q9UL54 1235 aa24.68■■□□□ 1.54
HMGXB4-203ENST00000420166 PHIPQ8WWQ0 1821 aa24.68■■□□□ 1.54
HMGXB4-203ENST00000420166 CAP2P40123 477 aa24.67■■□□□ 1.54
HMGXB4-203ENST00000420166 KIF23Q02241 960 aaPredicted RBP24.67■■□□□ 1.54
HMGXB4-203ENST00000420166 VPS53Q5VIR6 699 aa24.67■■□□□ 1.54
HMGXB4-203ENST00000420166 TATDN1Q6P1N9 297 aa24.67■■□□□ 1.54
HMGXB4-203ENST00000420166 NAPBQ9H115 298 aa24.67■■□□□ 1.54
HMGXB4-203ENST00000420166 PICK1Q9NRD5 415 aa24.67■■□□□ 1.54
HMGXB4-203ENST00000420166 SMIM22K7EJ46 135 aa24.66■■□□□ 1.54
HMGXB4-203ENST00000420166 SHMT1P34896 483 aa24.66■■□□□ 1.54
HMGXB4-203ENST00000420166 DYNLL2Q96FJ2 89 aa24.66■■□□□ 1.54
HMGXB4-203ENST00000420166 RAD50Q92878 1312 aa24.65■■□□□ 1.54
HMGXB4-203ENST00000420166 HSPD1P10809 573 aaKnown RBP24.65■■□□□ 1.54
HMGXB4-203ENST00000420166 PTPRAP18433 802 aa24.65■■□□□ 1.54
HMGXB4-203ENST00000420166 PPATQ06203 517 aa24.65■■□□□ 1.54
HMGXB4-203ENST00000420166 PPIL2Q13356 520 aa24.65■■□□□ 1.54
HMGXB4-203ENST00000420166 ALX1Q15699 326 aa24.65■■□□□ 1.54
HMGXB4-203ENST00000420166 SLC44A5Q8NCS7 719 aa24.65■■□□□ 1.54
HMGXB4-203ENST00000420166 SWAP70Q9UH65 585 aa24.65■■□□□ 1.54
HMGXB4-203ENST00000420166 ROBO3Q96MS0 1386 aa24.65■■□□□ 1.54
HMGXB4-203ENST00000420166 MINDY4BA8MYZ0 360 aa24.64■■□□□ 1.54
HMGXB4-203ENST00000420166 GDF11O95390 407 aa24.64■■□□□ 1.54
HMGXB4-203ENST00000420166 C16orf86Q6ZW13 317 aa24.64■■□□□ 1.54
HMGXB4-203ENST00000420166 RUFY2Q8WXA3 655 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms