RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 MAPKAPK5Q8IW41 473 aa18.46■□□□□ 0.55
RARA-205ENST00000420042 TGFBRAP1Q8WUH2 860 aa18.46■□□□□ 0.55
RARA-205ENST00000420042 TRIM34Q9BYJ4 488 aa18.46■□□□□ 0.55
RARA-205ENST00000420042 HERC5Q9UII4 1024 aaKnown RBP18.46■□□□□ 0.55
RARA-205ENST00000420042 DDX19BQ9UMR2 479 aa18.46■□□□□ 0.55
RARA-205ENST00000420042 CYP7A1P22680 504 aa18.45■□□□□ 0.54
RARA-205ENST00000420042 CAP2P40123 477 aa18.45■□□□□ 0.54
RARA-205ENST00000420042 SLC4A8Q2Y0W8 1093 aa18.45■□□□□ 0.54
RARA-205ENST00000420042 ADGRA1Q86SQ6 560 aa18.45■□□□□ 0.54
RARA-205ENST00000420042 RPAP2Q8IXW5 612 aaPredicted RBP18.45■□□□□ 0.54
RARA-205ENST00000420042 SMCR8Q8TEV9 937 aaPredicted RBP18.45■□□□□ 0.54
RARA-205ENST00000420042 TRIM47Q96LD4 638 aa18.45■□□□□ 0.54
RARA-205ENST00000420042 TBC1D2Q9BYX2 928 aa18.45■□□□□ 0.54
RARA-205ENST00000420042 SRRDQ9UH36 339 aa18.45■□□□□ 0.54
RARA-205ENST00000420042 MYCP01106 439 aaPredicted RBP18.44■□□□□ 0.54
RARA-205ENST00000420042 CTGFP29279 349 aa18.44■□□□□ 0.54
RARA-205ENST00000420042 FCGRTP55899 365 aa18.44■□□□□ 0.54
RARA-205ENST00000420042 PRPF38BQ5VTL8 546 aaKnown RBP18.44■□□□□ 0.54
RARA-205ENST00000420042 ZNF280CQ8ND82 737 aa18.44■□□□□ 0.54
RARA-205ENST00000420042 RHPN1Q8TCX5 695 aa18.44■□□□□ 0.54
RARA-205ENST00000420042 RAET1EQ8TD07 263 aa18.44■□□□□ 0.54
RARA-205ENST00000420042 SH3TC2Q8TF17 1288 aa18.44■□□□□ 0.54
RARA-205ENST00000420042 CHMP4BQ9H444 224 aaKnown RBP18.44■□□□□ 0.54
RARA-205ENST00000420042 AGTPBP1Q9UPW5 1226 aa18.44■□□□□ 0.54
RARA-205ENST00000420042 COG6Q9Y2V7 657 aa18.44■□□□□ 0.54
RARA-205ENST00000420042 FLT1P17948 1338 aa18.44■□□□□ 0.54
RARA-205ENST00000420042 USP17L5A8MUK1 530 aa18.43■□□□□ 0.54
RARA-205ENST00000420042 HMMRO75330 724 aa18.43■□□□□ 0.54
RARA-205ENST00000420042 BCRP11274 1271 aa18.43■□□□□ 0.54
RARA-205ENST00000420042 EN2P19622 333 aaPredicted RBP18.43■□□□□ 0.54
RARA-205ENST00000420042 OSBPP22059 807 aa18.43■□□□□ 0.54
RARA-205ENST00000420042 MAP3K12Q12852 859 aa18.43■□□□□ 0.54
RARA-205ENST00000420042 SPP2Q13103 211 aa18.43■□□□□ 0.54
RARA-205ENST00000420042 FOXP4Q8IVH2 680 aaPredicted RBP18.43■□□□□ 0.54
RARA-205ENST00000420042 CRACR2BQ8N4Y2 399 aaPredicted RBP18.43■□□□□ 0.54
RARA-205ENST00000420042 AS3MTQ9HBK9 375 aa18.43■□□□□ 0.54
RARA-205ENST00000420042 IL1RAPL2Q9NP60 686 aa18.43■□□□□ 0.54
RARA-205ENST00000420042 RCAN3Q9UKA8 241 aa18.43■□□□□ 0.54
RARA-205ENST00000420042 DOCK1Q14185 1865 aa18.42■□□□□ 0.54
RARA-205ENST00000420042 APBB1O00213 710 aa18.42■□□□□ 0.54
RARA-205ENST00000420042 HLA-DOAP06340 250 aa18.42■□□□□ 0.54
RARA-205ENST00000420042 DYNLL1P63167 89 aaKnown RBP18.42■□□□□ 0.54
RARA-205ENST00000420042 CERS3Q8IU89 383 aa18.42■□□□□ 0.54
RARA-205ENST00000420042 CLASRPQ8N2M8 674 aaKnown RBP18.42■□□□□ 0.54
RARA-205ENST00000420042 MAGEB6Q8N7X4 407 aa18.42■□□□□ 0.54
RARA-205ENST00000420042 PROCA1Q8NCQ7 364 aaPredicted RBP18.42■□□□□ 0.54
RARA-205ENST00000420042 PNMA3Q9UL41 463 aa18.42■□□□□ 0.54
RARA-205ENST00000420042 PALD1Q9ULE6 856 aa18.42■□□□□ 0.54
RARA-205ENST00000420042 NDUFB9Q9Y6M9 179 aa18.42■□□□□ 0.54
RARA-205ENST00000420042 MYPNQ86TC9 1320 aa18.42■□□□□ 0.54
RARA-205ENST00000420042 MAST2Q6P0Q8 1798 aa18.41■□□□□ 0.54
RARA-205ENST00000420042 RRP1BQ14684 758 aaKnown RBP18.41■□□□□ 0.54
RARA-205ENST00000420042 MIGA1Q8NAN2 632 aa18.41■□□□□ 0.54
RARA-205ENST00000420042 KIF1BPQ96EK5 621 aa18.41■□□□□ 0.54
RARA-205ENST00000420042 BCL11AQ9H165 835 aa18.41■□□□□ 0.54
RARA-205ENST00000420042 ANTXR1Q9H6X2 564 aa18.41■□□□□ 0.54
RARA-205ENST00000420042 SAP30BPQ9UHR5 308 aaKnown RBP18.41■□□□□ 0.54
RARA-205ENST00000420042 ASNSP08243 561 aa18.4■□□□□ 0.54
RARA-205ENST00000420042 USP5P45974 858 aa18.4■□□□□ 0.54
RARA-205ENST00000420042 HMGCS2P54868 508 aa18.4■□□□□ 0.54
RARA-205ENST00000420042 PABPC4Q13310 644 aaKnown RBP eCLIP18.4■□□□□ 0.54
RARA-205ENST00000420042 TTF1Q15361 905 aaPredicted RBP18.4■□□□□ 0.54
RARA-205ENST00000420042 TREML2Q5T2D2 321 aa18.4■□□□□ 0.54
RARA-205ENST00000420042 TMED8Q6PL24 325 aaPredicted RBP18.4■□□□□ 0.54
RARA-205ENST00000420042 ZBTB40Q9NUA8 1239 aa18.4■□□□□ 0.54
RARA-205ENST00000420042 IFIT2P09913 472 aaKnown RBP18.39■□□□□ 0.53
RARA-205ENST00000420042 GRK4P32298 578 aa18.39■□□□□ 0.53
RARA-205ENST00000420042 PRKCZQ05513 592 aa18.39■□□□□ 0.53
RARA-205ENST00000420042 ANKRD13CQ8N6S4 541 aa18.39■□□□□ 0.53
RARA-205ENST00000420042 BIN2Q9UBW5 565 aaPredicted RBP18.39■□□□□ 0.53
RARA-205ENST00000420042 ZSWIM8A7E2V4 1837 aa18.39■□□□□ 0.53
RARA-205ENST00000420042 RAB11FIP3O75154 756 aa18.38■□□□□ 0.53
RARA-205ENST00000420042 SH3D19Q5HYK7 790 aa18.38■□□□□ 0.53
RARA-205ENST00000420042 METTL16Q86W50 562 aaKnown RBP18.38■□□□□ 0.53
RARA-205ENST00000420042 GINM1Q9NU53 330 aa18.38■□□□□ 0.53
RARA-205ENST00000420042 TNPO2O14787 897 aaKnown RBP18.37■□□□□ 0.53
RARA-205ENST00000420042 GDF11O95390 407 aa18.37■□□□□ 0.53
RARA-205ENST00000420042 UBXN2AP68543 259 aa18.37■□□□□ 0.53
RARA-205ENST00000420042 MTMR2Q13614 643 aa18.37■□□□□ 0.53
RARA-205ENST00000420042 SIRT2Q8IXJ6 389 aa18.37■□□□□ 0.53
RARA-205ENST00000420042 WDR18Q9BV38 432 aa18.37■□□□□ 0.53
RARA-205ENST00000420042 DNAJC18Q9H819 358 aa18.37■□□□□ 0.53
RARA-205ENST00000420042 TMOD4Q9NZQ9 345 aa18.37■□□□□ 0.53
RARA-205ENST00000420042 PDE4DIPQ5VU43 2346 aa18.37■□□□□ 0.53
RARA-205ENST00000420042 GCLCP48506 637 aaPredicted RBP18.36■□□□□ 0.53
RARA-205ENST00000420042 BACE1P56817 501 aa18.36■□□□□ 0.53
RARA-205ENST00000420042 FAM110CQ1W6H9 321 aa18.36■□□□□ 0.53
RARA-205ENST00000420042 TTC6Q86TZ1 520 aa18.36■□□□□ 0.53
RARA-205ENST00000420042 SLAIN1Q8ND83 568 aa18.36■□□□□ 0.53
RARA-205ENST00000420042 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.36■□□□□ 0.53
RARA-205ENST00000420042 PHIPQ8WWQ0 1821 aa18.36■□□□□ 0.53
RARA-205ENST00000420042 DNAJC2Q99543 621 aaKnown RBP18.36■□□□□ 0.53
RARA-205ENST00000420042 GABRQQ9UN88 632 aa18.36■□□□□ 0.53
RARA-205ENST00000420042 RBBP6Q7Z6E9 1792 aaKnown RBP18.35■□□□□ 0.53
RARA-205ENST00000420042 MAGEB6P1A0A0J9YX57 407 aa18.35■□□□□ 0.53
RARA-205ENST00000420042 C19orf81C9J6K1 198 aa18.35■□□□□ 0.53
RARA-205ENST00000420042 MTFR1Q15390 333 aa18.35■□□□□ 0.53
RARA-205ENST00000420042 SLC9C2Q5TAH2 1124 aa18.35■□□□□ 0.53
RARA-205ENST00000420042 NKX2-3Q8TAU0 364 aa18.35■□□□□ 0.53
RARA-205ENST00000420042 COA7Q96BR5 231 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms