RNA–Protein interactions for RNA: ENST00000419493.2

CTSA-205, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-205ENST00000419493 HLA-DOAP06340 250 aa11.71□□□□□ -0.53
CTSA-205ENST00000419493 SP3Q02447 781 aa11.71□□□□□ -0.53
CTSA-205ENST00000419493 PKN2Q16513 984 aaKnown RBP11.71□□□□□ -0.53
CTSA-205ENST00000419493 TMED8Q6PL24 325 aaPredicted RBP11.71□□□□□ -0.53
CTSA-205ENST00000419493 FOXP4Q8IVH2 680 aaPredicted RBP11.71□□□□□ -0.53
CTSA-205ENST00000419493 GPATCH3Q96I76 525 aa11.71□□□□□ -0.53
CTSA-205ENST00000419493 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.71□□□□□ -0.531e-6■■□□□ 11.9
CTSA-205ENST00000419493 HERC5Q9UII4 1024 aaKnown RBP11.71□□□□□ -0.53
CTSA-205ENST00000419493 TRIM17Q9Y577 477 aa11.71□□□□□ -0.53
CTSA-205ENST00000419493 DOCK2Q92608 1830 aa11.71□□□□□ -0.54
CTSA-205ENST00000419493 TRIM75PA6NK02 468 aa11.7□□□□□ -0.54
CTSA-205ENST00000419493 CXCL11O14625 94 aa11.7□□□□□ -0.54
CTSA-205ENST00000419493 PDE6AP16499 860 aa11.7□□□□□ -0.54
CTSA-205ENST00000419493 GADL1Q6ZQY3 521 aa11.7□□□□□ -0.54
CTSA-205ENST00000419493 CCDC84Q86UT8 332 aaPredicted RBP11.7□□□□□ -0.54
CTSA-205ENST00000419493 ERO1AQ96HE7 468 aa11.7□□□□□ -0.54
CTSA-205ENST00000419493 HAUS7Q99871 368 aa11.7□□□□□ -0.54
CTSA-205ENST00000419493 CRNKL1Q9BZJ0 848 aaKnown RBP11.7□□□□□ -0.54
CTSA-205ENST00000419493 ECHDC1Q9NTX5 307 aa11.7□□□□□ -0.54
CTSA-205ENST00000419493 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.7□□□□□ -0.54
CTSA-205ENST00000419493 KCNH4Q9UQ05 1017 aa11.7□□□□□ -0.54
CTSA-205ENST00000419493 MAST2Q6P0Q8 1798 aa11.69□□□□□ -0.54
CTSA-205ENST00000419493 PDHXO00330 501 aa11.69□□□□□ -0.54
CTSA-205ENST00000419493 ECM2O94769 699 aaPredicted RBP11.69□□□□□ -0.54
CTSA-205ENST00000419493 POLR3DP05423 398 aaPredicted RBP11.69□□□□□ -0.54
CTSA-205ENST00000419493 CAP2P40123 477 aa11.69□□□□□ -0.54
CTSA-205ENST00000419493 KIF22Q14807 665 aa11.69□□□□□ -0.54
CTSA-205ENST00000419493 ARHGEF6Q15052 776 aa11.69□□□□□ -0.54
CTSA-205ENST00000419493 FASTKD5Q7L8L6 764 aaKnown RBP11.69□□□□□ -0.54
CTSA-205ENST00000419493 ANKRD23Q86SG2 305 aa11.69□□□□□ -0.54
CTSA-205ENST00000419493 CD99L2Q8TCZ2 262 aa11.69□□□□□ -0.54
CTSA-205ENST00000419493 USP17L5A8MUK1 530 aa11.68□□□□□ -0.54
CTSA-205ENST00000419493 TLR2O60603 784 aa11.68□□□□□ -0.54
CTSA-205ENST00000419493 SPP2Q13103 211 aa11.68□□□□□ -0.54
CTSA-205ENST00000419493 ANKRD45Q5TZF3 282 aa11.68□□□□□ -0.54
CTSA-205ENST00000419493 TSHZ3Q63HK5 1081 aa11.68□□□□□ -0.54
CTSA-205ENST00000419493 ZSCAN25Q6NSZ9 544 aa11.68□□□□□ -0.54
CTSA-205ENST00000419493 TTC6Q86TZ1 520 aa11.68□□□□□ -0.54
CTSA-205ENST00000419493 RIOK1Q9BRS2 568 aaKnown RBP11.68□□□□□ -0.54
CTSA-205ENST00000419493 EFCC1Q9HA90 598 aa11.68□□□□□ -0.54
CTSA-205ENST00000419493 AS3MTQ9HBK9 375 aa11.68□□□□□ -0.54
CTSA-205ENST00000419493 ZCCHC17Q9NP64 241 aaKnown RBP11.68□□□□□ -0.54
CTSA-205ENST00000419493 AFG3L2Q9Y4W6 797 aa11.68□□□□□ -0.54
CTSA-205ENST00000419493 COL2A1P02458 1487 aaPredicted RBP11.68□□□□□ -0.54
CTSA-205ENST00000419493 ERC2O15083 957 aa11.67□□□□□ -0.54
CTSA-205ENST00000419493 GDF11O95390 407 aa11.67□□□□□ -0.54
CTSA-205ENST00000419493 ADD2P35612 726 aa11.67□□□□□ -0.54
CTSA-205ENST00000419493 SLFNL1Q499Z3 407 aa11.67□□□□□ -0.54
CTSA-205ENST00000419493 FBXO46Q6PJ61 603 aaPredicted RBP11.67□□□□□ -0.54
CTSA-205ENST00000419493 LCORLQ8N3X6 602 aa11.67□□□□□ -0.54
CTSA-205ENST00000419493 ZNF280CQ8ND82 737 aa11.67□□□□□ -0.54
CTSA-205ENST00000419493 ARMT1Q9H993 441 aa11.67□□□□□ -0.54
CTSA-205ENST00000419493 MCM9Q9NXL9 1143 aa11.67□□□□□ -0.54
CTSA-205ENST00000419493 CPA4Q9UI42 421 aa11.67□□□□□ -0.54
CTSA-205ENST00000419493 SERPINB13Q9UIV8 391 aa11.67□□□□□ -0.54
CTSA-205ENST00000419493 SUPT16HQ9Y5B9 1047 aaKnown RBP11.67□□□□□ -0.54
CTSA-205ENST00000419493 A0A0G2JLL6 359 aaPredicted RBP11.66□□□□□ -0.54
CTSA-205ENST00000419493 TCRBV5S4A2TA0A5A2 114 aa11.66□□□□□ -0.54
CTSA-205ENST00000419493 MBD4O95243 580 aa11.66□□□□□ -0.54
CTSA-205ENST00000419493 ASNSP08243 561 aa11.66□□□□□ -0.54
CTSA-205ENST00000419493 CYP2C8P10632 490 aa11.66□□□□□ -0.54
CTSA-205ENST00000419493 RRP1BQ14684 758 aaKnown RBP11.66□□□□□ -0.54
CTSA-205ENST00000419493 OTOP1Q7RTM1 612 aa11.66□□□□□ -0.54
CTSA-205ENST00000419493 PRRT2Q7Z6L0 340 aaPredicted RBP11.66□□□□□ -0.54
CTSA-205ENST00000419493 SMCR8Q8TEV9 937 aaPredicted RBP11.66□□□□□ -0.54
CTSA-205ENST00000419493 SDR42E1Q8WUS8 393 aa11.66□□□□□ -0.54
CTSA-205ENST00000419493 DDRGK1Q96HY6 314 aa11.66□□□□□ -0.54
CTSA-205ENST00000419493 PARK7Q99497 189 aaKnown RBP11.66□□□□□ -0.54
CTSA-205ENST00000419493 TBC1D2Q9BYX2 928 aa11.66□□□□□ -0.54
CTSA-205ENST00000419493 DNAJC18Q9H819 358 aa11.66□□□□□ -0.54
CTSA-205ENST00000419493 HPS5Q9UPZ3 1129 aa11.66□□□□□ -0.54
CTSA-205ENST00000419493 LAMB1P07942 1786 aa11.66□□□□□ -0.54
CTSA-205ENST00000419493 PLCD1P51178 756 aa11.65□□□□□ -0.54
CTSA-205ENST00000419493 HMGCS2P54868 508 aa11.65□□□□□ -0.54
CTSA-205ENST00000419493 AAMPQ13685 434 aa11.65□□□□□ -0.54
CTSA-205ENST00000419493 MOGSQ13724 837 aa11.65□□□□□ -0.54
CTSA-205ENST00000419493 UBE3CQ15386 1083 aa11.65□□□□□ -0.54
CTSA-205ENST00000419493 GPAT2Q6NUI2 795 aa11.65□□□□□ -0.54
CTSA-205ENST00000419493 AMOTL1Q8IY63 956 aa11.65□□□□□ -0.54
CTSA-205ENST00000419493 EXOC6Q8TAG9 804 aa11.65□□□□□ -0.54
CTSA-205ENST00000419493 GCC1Q96CN9 775 aa11.65□□□□□ -0.54
CTSA-205ENST00000419493 RWDD1Q9H446 243 aaPredicted RBP11.65□□□□□ -0.54
CTSA-205ENST00000419493 CABP5Q9NP86 173 aa11.65□□□□□ -0.54
CTSA-205ENST00000419493 DOCK1Q14185 1865 aa11.65□□□□□ -0.54
CTSA-205ENST00000419493 TTC41PQ6P2S7 1318 aa11.64□□□□□ -0.55
CTSA-205ENST00000419493 CDK5RAP2Q96SN8 1893 aa11.64□□□□□ -0.55
CTSA-205ENST00000419493 PRKAB2O43741 272 aa11.64□□□□□ -0.55
CTSA-205ENST00000419493 CHGBP05060 677 aa11.64□□□□□ -0.55
CTSA-205ENST00000419493 LACTBP83111 547 aaPredicted RBP11.64□□□□□ -0.55
CTSA-205ENST00000419493 RAB3GAP1Q15042 981 aa11.64□□□□□ -0.55
CTSA-205ENST00000419493 LRRFIP1Q32MZ4 808 aaKnown RBP11.64□□□□□ -0.55
CTSA-205ENST00000419493 CERKLQ49MI3 558 aaPredicted RBP11.64□□□□□ -0.55
CTSA-205ENST00000419493 METTL16Q86W50 562 aaKnown RBP11.64□□□□□ -0.55
CTSA-205ENST00000419493 KBTBD3Q8NAB2 608 aa11.64□□□□□ -0.55
CTSA-205ENST00000419493 EHD4Q9H223 541 aa11.64□□□□□ -0.55
CTSA-205ENST00000419493 DCP1AQ9NPI6 582 aaPredicted RBP11.64□□□□□ -0.55
CTSA-205ENST00000419493 ATP8A2Q9NTI2 1148 aa11.64□□□□□ -0.55
CTSA-205ENST00000419493 TMOD4Q9NZQ9 345 aa11.64□□□□□ -0.55
CTSA-205ENST00000419493 AGTPBP1Q9UPW5 1226 aa11.64□□□□□ -0.55
CTSA-205ENST00000419493 PTPN22Q9Y2R2 807 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms