RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 NUTM2AQ8IVF1 878 aaPredicted RBP17.37■□□□□ 0.37
SEMA3B-203ENST00000419007 SAMSN1Q9NSI8 373 aaKnown RBP17.37■□□□□ 0.37
SEMA3B-203ENST00000419007 SPEF2Q9C093 1822 aa17.37■□□□□ 0.37
SEMA3B-203ENST00000419007 TADA3O75528 432 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 SPECC1LQ69YQ0 1117 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 MFSD6Q6ZSS7 791 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 IFNL3Q8IZI9 196 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 FAM53CQ9NYF3 392 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 PCDHB6Q9Y5E3 794 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 WDR17Q8IZU2 1322 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 PRKAB2O43741 272 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 PDE8BO95263 885 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 CTSWP56202 376 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 EVA1CP58658 441 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 SRRTQ9BXP5 876 aaKnown RBP17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 RIC1Q4ADV7 1423 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 TOB1P50616 345 aaPredicted RBP17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 STX17P56962 302 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 RTN1Q16799 776 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 USP49Q70CQ1 688 aa17.36■□□□□ 0.37
SEMA3B-203ENST00000419007 CCDC66A2RUB6 948 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 TOM1O60784 492 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 ADAMTS2O95450 1211 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 EPB41L4AQ9HCS5 686 aaPredicted RBP17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 ALS2Q96Q42 1657 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 EFCAB8A8MWE9 144 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 STARD3NLO95772 234 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 MMP1P03956 469 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 AFMP43652 599 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 PLA2G4AP47712 749 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 NLRP10Q86W26 655 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 TMEM139Q8IV31 216 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 WASF1Q92558 559 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 CCDC34Q96HJ3 373 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 CABP5Q9NP86 173 aa17.35■□□□□ 0.37
SEMA3B-203ENST00000419007 ERICH2A1L162 156 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 FMNL1O95466 1100 aaPredicted RBP17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 TRIM28Q13263 835 aaKnown RBP17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 CCDC12Q8WUD4 166 aaPredicted RBP17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 IRX2Q9BZI1 471 aaPredicted RBP17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 LZTFL1Q9NQ48 299 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 LAMB4A4D0S4 1761 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 TNS3Q68CZ2 1445 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 SOS2Q07890 1332 aaPredicted RBP17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 GLI3P10071 1580 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 PPP2R3AQ06190 1150 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 MAP3K12Q12852 859 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 MTF1Q14872 753 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 WTAPQ15007 396 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 SART3Q15020 963 aaKnown RBP17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 GIGYF2Q6Y7W6 1299 aaKnown RBP17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 SGMS1Q86VZ5 419 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 CREBRFQ8IUR6 639 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 TC2NQ8N9U0 490 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 MIGA1Q8NAN2 632 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 DHX58Q96C10 678 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 XIRP1Q702N8 1843 aaKnown RBP17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 hCG_1642624A0A1W2PR95 340 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 PATL2C9JE40 543 aaKnown RBP17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 AKNAD1Q5T1N1 836 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 OXER1Q8TDS5 423 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 MPHOSPH8Q99549 860 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 DACH1Q9UI36 760 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 ABCC12Q96J65 1359 aa17.34■□□□□ 0.37
SEMA3B-203ENST00000419007 FAM237AA0A1B0GTK4 181 aa17.33■□□□□ 0.37
SEMA3B-203ENST00000419007 CASP1P29466 404 aa17.33■□□□□ 0.37
SEMA3B-203ENST00000419007 MDM2Q00987 491 aaPredicted RBP17.33■□□□□ 0.37
SEMA3B-203ENST00000419007 MLKLQ8NB16 471 aa17.33■□□□□ 0.37
SEMA3B-203ENST00000419007 PLA2G12BQ9BX93 195 aa17.33■□□□□ 0.37
SEMA3B-203ENST00000419007 FBXO2Q9UK22 296 aaPredicted RBP17.33■□□□□ 0.37
SEMA3B-203ENST00000419007 A0A0G2JS52 829 aa17.33■□□□□ 0.36
SEMA3B-203ENST00000419007 IFNAR1P17181 557 aa17.33■□□□□ 0.36
SEMA3B-203ENST00000419007 TAF3Q5VWG9 929 aa17.33■□□□□ 0.36
SEMA3B-203ENST00000419007 SPATA5Q8NB90 893 aa17.33■□□□□ 0.36
SEMA3B-203ENST00000419007 MAP3K15Q6ZN16 1313 aa17.33■□□□□ 0.36
SEMA3B-203ENST00000419007 STX10O60499 249 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 PTPREP23469 700 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 LIFRP42702 1097 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 RILPL1Q5EBL4 403 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 FCHSD1Q86WN1 690 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 ZCCHC17Q9NP64 241 aaKnown RBP17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 RAI14Q9P0K7 980 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 TACC3Q9Y6A5 838 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 SLC4A4Q9Y6R1 1079 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 NUP188Q5SRE5 1749 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 COL18A1P39060 1754 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 UQCRFS1P1P0C7P4 283 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 CSRNP2Q9H175 543 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 TCRBV5S4A2TA0A5A2 114 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 MINDY4BA8MYZ0 360 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 TRERF1Q96PN7 1200 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 SEC31BQ9NQW1 1179 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 IQSEC3Q9UPP2 1182 aaPredicted RBP17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 KCPQ6ZWJ8 1503 aa17.32■□□□□ 0.36
SEMA3B-203ENST00000419007 SOWAHDA6NJG2 315 aa17.31■□□□□ 0.36
SEMA3B-203ENST00000419007 RASGRF1Q13972 1273 aa17.31■□□□□ 0.36
SEMA3B-203ENST00000419007 KRT23Q9C075 422 aa17.31■□□□□ 0.36
SEMA3B-203ENST00000419007 CNNM2Q9H8M5 875 aa17.31■□□□□ 0.36
SEMA3B-203ENST00000419007 C4AP0C0L4 1744 aa17.31■□□□□ 0.36
SEMA3B-203ENST00000419007 C4BP0C0L5 1744 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms