RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 USP5P45974 858 aa22.46■■□□□ 1.19
PTCD3-204ENST00000418628 TTC22Q5TAA0 569 aa22.46■■□□□ 1.19
PTCD3-204ENST00000418628 SPRYD7Q5W111 196 aa22.46■■□□□ 1.19
PTCD3-204ENST00000418628 AIDAQ96BJ3 306 aa22.46■■□□□ 1.19
PTCD3-204ENST00000418628 WNK4Q96J92 1243 aa22.46■■□□□ 1.19
PTCD3-204ENST00000418628 EHD4Q9H223 541 aa22.46■■□□□ 1.19
PTCD3-204ENST00000418628 HERC5Q9UII4 1024 aaKnown RBP22.46■■□□□ 1.19
PTCD3-204ENST00000418628 GPAA1O43292 621 aa22.45■■□□□ 1.18
PTCD3-204ENST00000418628 PRKAB2O43741 272 aa22.45■■□□□ 1.18
PTCD3-204ENST00000418628 ATP8A2Q9NTI2 1148 aa22.45■■□□□ 1.18
PTCD3-204ENST00000418628 SPDYE5A6NIY4 337 aa22.44■■□□□ 1.18
PTCD3-204ENST00000418628 ZKSCAN4Q969J2 545 aaPredicted RBP22.44■■□□□ 1.18
PTCD3-204ENST00000418628 CCDC136Q96JN2 1154 aa22.44■■□□□ 1.18
PTCD3-204ENST00000418628 SEC62Q99442 399 aaKnown RBP22.44■■□□□ 1.18
PTCD3-204ENST00000418628 SAP30BPQ9UHR5 308 aaKnown RBP22.44■■□□□ 1.18
PTCD3-204ENST00000418628 CSADQ9Y600 493 aa22.44■■□□□ 1.18
PTCD3-204ENST00000418628 MYH4Q9Y623 1939 aa22.43■■□□□ 1.18
PTCD3-204ENST00000418628 FAM196BA6NMK8 535 aa22.43■■□□□ 1.18
PTCD3-204ENST00000418628 GABPAQ06546 454 aa22.43■■□□□ 1.18
PTCD3-204ENST00000418628 ELP3Q9H9T3 547 aa22.43■■□□□ 1.18
PTCD3-204ENST00000418628 GSG1L2A8MUP6 293 aa22.42■■□□□ 1.18
PTCD3-204ENST00000418628 FOXP2O15409 715 aa22.42■■□□□ 1.18
PTCD3-204ENST00000418628 GRM1Q13255 1194 aa22.42■■□□□ 1.18
PTCD3-204ENST00000418628 RRP1BQ14684 758 aaKnown RBP22.42■■□□□ 1.18
PTCD3-204ENST00000418628 GIMAP6Q6P9H5 292 aa22.42■■□□□ 1.18
PTCD3-204ENST00000418628 FOXP4Q8IVH2 680 aaPredicted RBP22.42■■□□□ 1.18
PTCD3-204ENST00000418628 CNKSR2Q8WXI2 1034 aa22.42■■□□□ 1.18
PTCD3-204ENST00000418628 SLC10A4Q96EP9 437 aa22.42■■□□□ 1.18
PTCD3-204ENST00000418628 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.42■■□□□ 1.18
PTCD3-204ENST00000418628 EPB41L4AQ9HCS5 686 aaPredicted RBP22.42■■□□□ 1.18
PTCD3-204ENST00000418628 WBP1LQ9NX94 342 aa22.42■■□□□ 1.18
PTCD3-204ENST00000418628 ROBO3Q96MS0 1386 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 PARP14Q460N5 1801 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 A0A0D9SFI3 127 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 TRIM6-TRIM34B2RNG4 842 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 CTNND1O60716 968 aaKnown RBP22.41■■□□□ 1.18
PTCD3-204ENST00000418628 HLA-DOAP06340 250 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 PLCD1P51178 756 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 KIF23Q02241 960 aaPredicted RBP22.41■■□□□ 1.18
PTCD3-204ENST00000418628 EVX2Q03828 476 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 ERO1BQ86YB8 467 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 SCYL3Q8IZE3 742 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 OPTNQ96CV9 577 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 HELLSQ9NRZ9 838 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 TAOK2Q9UL54 1235 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 SLC4A4Q9Y6R1 1079 aa22.41■■□□□ 1.18
PTCD3-204ENST00000418628 CASP8AP2Q9UKL3 1982 aa22.4■■□□□ 1.18
PTCD3-204ENST00000418628 GNAT2P19087 354 aa22.4■■□□□ 1.18
PTCD3-204ENST00000418628 TATDN1Q6P1N9 297 aa22.4■■□□□ 1.18
PTCD3-204ENST00000418628 TTC6Q86TZ1 520 aa22.4■■□□□ 1.18
PTCD3-204ENST00000418628 FAM227BQ96M60 508 aa22.4■■□□□ 1.18
PTCD3-204ENST00000418628 MCM9Q9NXL9 1143 aa22.4■■□□□ 1.18
PTCD3-204ENST00000418628 SERPINB13Q9UIV8 391 aa22.4■■□□□ 1.18
PTCD3-204ENST00000418628 SDSP20132 328 aa22.39■■□□□ 1.17
PTCD3-204ENST00000418628 NMIQ13287 307 aaPredicted RBP22.39■■□□□ 1.17
PTCD3-204ENST00000418628 PPIL2Q13356 520 aa22.39■■□□□ 1.17
PTCD3-204ENST00000418628 REM2Q8IYK8 340 aaPredicted RBP22.39■■□□□ 1.17
PTCD3-204ENST00000418628 RILPL2Q969X0 211 aa22.39■■□□□ 1.17
PTCD3-204ENST00000418628 TESPA1A2RU30 521 aaPredicted RBP22.38■■□□□ 1.17
PTCD3-204ENST00000418628 CYP2D6P10635 497 aa22.38■■□□□ 1.17
PTCD3-204ENST00000418628 CAP2P40123 477 aa22.38■■□□□ 1.17
PTCD3-204ENST00000418628 TM4SF4P48230 202 aa22.38■■□□□ 1.17
PTCD3-204ENST00000418628 MAP2K1Q02750 393 aaPredicted RBP22.38■■□□□ 1.17
PTCD3-204ENST00000418628 PPATQ06203 517 aa22.38■■□□□ 1.17
PTCD3-204ENST00000418628 SLC4A8Q2Y0W8 1093 aa22.38■■□□□ 1.17
PTCD3-204ENST00000418628 SBK1Q52WX2 424 aa22.38■■□□□ 1.17
PTCD3-204ENST00000418628 C12orf60Q5U649 245 aa22.38■■□□□ 1.17
PTCD3-204ENST00000418628 MS4A4AQ96JQ5 239 aa22.38■■□□□ 1.17
PTCD3-204ENST00000418628 PPP4R2Q9NY27 417 aa22.38■■□□□ 1.17
PTCD3-204ENST00000418628 ARPP21Q9UBL0 812 aaPredicted RBP22.38■■□□□ 1.17
PTCD3-204ENST00000418628 KCNH4Q9UQ05 1017 aa22.38■■□□□ 1.17
PTCD3-204ENST00000418628 SHMT1P34896 483 aa22.37■■□□□ 1.17
PTCD3-204ENST00000418628 CTR9Q6PD62 1173 aa22.37■■□□□ 1.17
PTCD3-204ENST00000418628 CCDC129Q6ZRS4 1044 aa22.37■■□□□ 1.17
PTCD3-204ENST00000418628 SKAP1Q86WV1 359 aa22.37■■□□□ 1.17
PTCD3-204ENST00000418628 OTUD5Q96G74 571 aa22.37■■□□□ 1.17
PTCD3-204ENST00000418628 MANSC4A6NHS7 340 aaPredicted RBP22.36■■□□□ 1.17
PTCD3-204ENST00000418628 SMIM22K7EJ46 135 aa22.36■■□□□ 1.17
PTCD3-204ENST00000418628 POLR3DP05423 398 aaPredicted RBP22.36■■□□□ 1.17
PTCD3-204ENST00000418628 PTPRAP18433 802 aa22.36■■□□□ 1.17
PTCD3-204ENST00000418628 MCMDC2Q4G0Z9 681 aa22.36■■□□□ 1.17
PTCD3-204ENST00000418628 ZNF589Q86UQ0 364 aaPredicted RBP22.36■■□□□ 1.17
PTCD3-204ENST00000418628 CRACR2BQ8N4Y2 399 aaPredicted RBP22.36■■□□□ 1.17
PTCD3-204ENST00000418628 ZMYM6O95789 1325 aa22.35■■□□□ 1.17
PTCD3-204ENST00000418628 CYP2D7A0A087X1C5 515 aa22.35■■□□□ 1.17
PTCD3-204ENST00000418628 PATL2C9JE40 543 aaKnown RBP22.35■■□□□ 1.17
PTCD3-204ENST00000418628 USP17L12C9JPN9 530 aa22.35■■□□□ 1.17
PTCD3-204ENST00000418628 USP17L21D6R901 530 aa22.35■■□□□ 1.17
PTCD3-204ENST00000418628 IRF6O14896 467 aa22.35■■□□□ 1.17
PTCD3-204ENST00000418628 HSPA1AP0DMV8 641 aaKnown RBP22.35■■□□□ 1.17
PTCD3-204ENST00000418628 HSPA1BP0DMV9 641 aaKnown RBP22.35■■□□□ 1.17
PTCD3-204ENST00000418628 JAG1P78504 1218 aa22.35■■□□□ 1.17
PTCD3-204ENST00000418628 MKRN3Q13064 507 aaKnown RBP22.35■■□□□ 1.17
PTCD3-204ENST00000418628 GINM1Q9NU53 330 aa22.35■■□□□ 1.17
PTCD3-204ENST00000418628 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.35■■□□□ 1.17
PTCD3-204ENST00000418628 MGAMO43451 1857 aa22.34■■□□□ 1.17
PTCD3-204ENST00000418628 CCDC171Q6TFL3 1326 aa22.34■■□□□ 1.17
PTCD3-204ENST00000418628 HIP1O00291 1037 aa22.34■■□□□ 1.17
PTCD3-204ENST00000418628 SREBF2Q12772 1141 aa22.34■■□□□ 1.17
PTCD3-204ENST00000418628 SHROOM1Q2M3G4 852 aaPredicted RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms