RNA–Protein interactions for RNA: ENST00000418436.5

RFC1-203, Transcript of replication factor C subunit 1, humanhuman

TSL 1 (best)

Gene RFC1, Length 1,255 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-203ENST00000418436 CYP4F22Q6NT55 531 aa12.77□□□□□ -0.37
RFC1-203ENST00000418436 RGMBQ6NW40 437 aa12.77□□□□□ -0.37
RFC1-203ENST00000418436 ARMC9Q7Z3E5 817 aa12.77□□□□□ -0.37
RFC1-203ENST00000418436 OTUD7AQ8TE49 926 aaPredicted RBP12.77□□□□□ -0.37
RFC1-203ENST00000418436 PTCD2Q8WV60 388 aaKnown RBP12.77□□□□□ -0.37
RFC1-203ENST00000418436 EDC3Q96F86 508 aaKnown RBP12.77□□□□□ -0.37
RFC1-203ENST00000418436 GPATCH3Q96I76 525 aa12.77□□□□□ -0.37
RFC1-203ENST00000418436 CAPNS2Q96L46 248 aa12.77□□□□□ -0.37
RFC1-203ENST00000418436 DNAJC2Q99543 621 aaKnown RBP12.77□□□□□ -0.37
RFC1-203ENST00000418436 KRTAP3-3Q9BYR6 98 aa12.77□□□□□ -0.37
RFC1-203ENST00000418436 KRTAP3-2Q9BYR7 98 aa12.77□□□□□ -0.37
RFC1-203ENST00000418436 OTOFQ9HC10 1997 aa12.77□□□□□ -0.37
RFC1-203ENST00000418436 UNCXA6NJT0 531 aa12.76□□□□□ -0.37
RFC1-203ENST00000418436 FAM155AB1AL88 458 aaPredicted RBP12.76□□□□□ -0.37
RFC1-203ENST00000418436 PPP1R12BO60237 982 aaPredicted RBP12.76□□□□□ -0.37
RFC1-203ENST00000418436 BAG3O95817 575 aa12.76□□□□□ -0.37
RFC1-203ENST00000418436 NUDT7P0C024 238 aa12.76□□□□□ -0.37
RFC1-203ENST00000418436 CYP7A1P22680 504 aa12.76□□□□□ -0.37
RFC1-203ENST00000418436 PDE4AP27815 886 aa12.76□□□□□ -0.37
RFC1-203ENST00000418436 RGS3P49796 1198 aa12.76□□□□□ -0.37
RFC1-203ENST00000418436 TCP10Q12799 353 aa12.76□□□□□ -0.37
RFC1-203ENST00000418436 ZFPM1Q8IX07 1006 aa12.76□□□□□ -0.37
RFC1-203ENST00000418436 MAGEB6Q8N7X4 407 aa12.76□□□□□ -0.37
RFC1-203ENST00000418436 PI4K2BQ8TCG2 481 aa12.76□□□□□ -0.37
RFC1-203ENST00000418436 DDX4Q9NQI0 724 aaKnown RBP12.76□□□□□ -0.37
RFC1-203ENST00000418436 AATFQ9NY61 560 aaKnown RBP eCLIP12.76□□□□□ -0.37
RFC1-203ENST00000418436 ANGEL1Q9UNK9 670 aaKnown RBP12.76□□□□□ -0.37
RFC1-203ENST00000418436 FZD1Q9UP38 647 aa12.76□□□□□ -0.37
RFC1-203ENST00000418436 TCRBV5S4A2TA0A5A2 114 aa12.75□□□□□ -0.37
RFC1-203ENST00000418436 COL2A1P02458 1487 aaPredicted RBP12.75□□□□□ -0.37
RFC1-203ENST00000418436 LAMB1P07942 1786 aa12.75□□□□□ -0.37
RFC1-203ENST00000418436 PDE6AP16499 860 aa12.75□□□□□ -0.37
RFC1-203ENST00000418436 MX1P20591 662 aa12.75□□□□□ -0.37
RFC1-203ENST00000418436 NUCB1Q02818 461 aa12.75□□□□□ -0.37
RFC1-203ENST00000418436 PRKG1Q13976 671 aa12.75□□□□□ -0.37
RFC1-203ENST00000418436 TTLL12Q14166 644 aaPredicted RBP12.75□□□□□ -0.37
RFC1-203ENST00000418436 TSHZ3Q63HK5 1081 aa12.75□□□□□ -0.37
RFC1-203ENST00000418436 SH3RF3Q8TEJ3 882 aaPredicted RBP12.75□□□□□ -0.37
RFC1-203ENST00000418436 CCDC102AQ96A19 550 aa12.75□□□□□ -0.37
RFC1-203ENST00000418436 HOOK2Q96ED9 719 aa12.75□□□□□ -0.37
RFC1-203ENST00000418436 NOL10Q9BSC4 688 aaKnown RBP12.75□□□□□ -0.37
RFC1-203ENST00000418436 STAP2Q9UGK3 403 aa12.75□□□□□ -0.37
RFC1-203ENST00000418436 ATRNL1Q5VV63 1379 aa12.74□□□□□ -0.37
RFC1-203ENST00000418436 ERC2O15083 957 aa12.74□□□□□ -0.37
RFC1-203ENST00000418436 GLRX3O76003 335 aaKnown RBP12.74□□□□□ -0.37
RFC1-203ENST00000418436 SLC10A3P09131 477 aa12.74□□□□□ -0.37
RFC1-203ENST00000418436 MAP2K2P36507 400 aa12.74□□□□□ -0.37
RFC1-203ENST00000418436 ZNF157P51786 506 aaPredicted RBP12.74□□□□□ -0.37
RFC1-203ENST00000418436 PPP1R15BQ5SWA1 713 aa12.74□□□□□ -0.37
RFC1-203ENST00000418436 SLC9C2Q5TAH2 1124 aa12.74□□□□□ -0.37
RFC1-203ENST00000418436 PAXIP1Q6ZW49 1069 aaPredicted RBP12.74□□□□□ -0.37
RFC1-203ENST00000418436 SH3BP5LQ7L8J4 393 aa12.74□□□□□ -0.37
RFC1-203ENST00000418436 CHD1LQ86WJ1 897 aa12.74□□□□□ -0.37
RFC1-203ENST00000418436 RASAL3Q86YV0 1011 aa12.74□□□□□ -0.37
RFC1-203ENST00000418436 CERS3Q8IU89 383 aa12.74□□□□□ -0.37
RFC1-203ENST00000418436 TEX11Q8IYF3 940 aa12.74□□□□□ -0.37
RFC1-203ENST00000418436 ZNF532Q9HCE3 1301 aa12.73□□□□□ -0.37
RFC1-203ENST00000418436 DDTLA6NHG4 134 aaPredicted RBP12.73□□□□□ -0.37
RFC1-203ENST00000418436 ADD2P35612 726 aa12.73□□□□□ -0.37
RFC1-203ENST00000418436 IREB2P48200 963 aaKnown RBP12.73□□□□□ -0.37
RFC1-203ENST00000418436 PDE1AP54750 535 aa12.73□□□□□ -0.37
RFC1-203ENST00000418436 DYNLL1P63167 89 aaKnown RBP12.73□□□□□ -0.37
RFC1-203ENST00000418436 MAP3K10Q02779 954 aa12.73□□□□□ -0.37
RFC1-203ENST00000418436 NOGQ13253 232 aa12.73□□□□□ -0.37
RFC1-203ENST00000418436 B4GALNT3Q6L9W6 998 aa12.73□□□□□ -0.37
RFC1-203ENST00000418436 KBTBD3Q8NAB2 608 aa12.73□□□□□ -0.37
RFC1-203ENST00000418436 RIOK1Q9BRS2 568 aaKnown RBP12.73□□□□□ -0.37
RFC1-203ENST00000418436 LNPKQ9C0E8 428 aa12.73□□□□□ -0.37
RFC1-203ENST00000418436 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.73□□□□□ -0.37
RFC1-203ENST00000418436 MYH1P12882 1939 aa12.72□□□□□ -0.37
RFC1-203ENST00000418436 PCNTO95613 3336 aa12.72□□□□□ -0.37
RFC1-203ENST00000418436 SIPA1L1O43166 1804 aa12.72□□□□□ -0.37
RFC1-203ENST00000418436 AOC2O75106 756 aa12.72□□□□□ -0.37
RFC1-203ENST00000418436 PICALMQ13492 652 aa12.72□□□□□ -0.37
RFC1-203ENST00000418436 UBE3CQ15386 1083 aa12.72□□□□□ -0.37
RFC1-203ENST00000418436 DCAF15Q66K64 600 aa12.72□□□□□ -0.37
RFC1-203ENST00000418436 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.72□□□□□ -0.37
RFC1-203ENST00000418436 ANKRD13AQ8IZ07 590 aa12.72□□□□□ -0.37
RFC1-203ENST00000418436 ZNF687Q8N1G0 1237 aa12.72□□□□□ -0.37
RFC1-203ENST00000418436 MIGA1Q8NAN2 632 aa12.72□□□□□ -0.37
RFC1-203ENST00000418436 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.72□□□□□ -0.37
RFC1-203ENST00000418436 ZIC5Q96T25 663 aa12.72□□□□□ -0.37
RFC1-203ENST00000418436 OSBPL5Q9H0X9 879 aaPredicted RBP12.72□□□□□ -0.37
RFC1-203ENST00000418436 ZNF112Q9UJU3 913 aa12.72□□□□□ -0.37
RFC1-203ENST00000418436 MAP3K9P80192 1104 aa12.71□□□□□ -0.37
RFC1-203ENST00000418436 GRM1Q13255 1194 aa12.71□□□□□ -0.37
RFC1-203ENST00000418436 ZSCAN25Q6NSZ9 544 aa12.71□□□□□ -0.37
RFC1-203ENST00000418436 MIGA2Q7L4E1 593 aa12.71□□□□□ -0.37
RFC1-203ENST00000418436 TGFBRAP1Q8WUH2 860 aa12.71□□□□□ -0.37
RFC1-203ENST00000418436 CLMNQ96JQ2 1002 aa12.71□□□□□ -0.37
RFC1-203ENST00000418436 CSRNP1Q96S65 589 aa12.71□□□□□ -0.37
RFC1-203ENST00000418436 ZNF341Q9BYN7 854 aa12.71□□□□□ -0.37
RFC1-203ENST00000418436 OSBPL3Q9H4L5 887 aa12.71□□□□□ -0.37
RFC1-203ENST00000418436 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.71□□□□□ -0.37
RFC1-203ENST00000418436 DDX60LQ5H9U9 1706 aaKnown RBP12.71□□□□□ -0.38
RFC1-203ENST00000418436 FLT1P17948 1338 aa12.7□□□□□ -0.38
RFC1-203ENST00000418436 MAGEB6P1A0A0J9YX57 407 aa12.7□□□□□ -0.38
RFC1-203ENST00000418436 TBC1D12O60347 775 aa12.7□□□□□ -0.38
RFC1-203ENST00000418436 CHGBP05060 677 aa12.7□□□□□ -0.38
RFC1-203ENST00000418436 MAP2K1Q02750 393 aaPredicted RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms