RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 ZEB2O60315 1214 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 TNNC1P63316 161 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 DNAJC21Q5F1R6 531 aaKnown RBP12.52□□□□□ -0.41
PTCH1-205ENST00000418258 ARHGAP27Q6ZUM4 889 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 CPLX4Q7Z7G2 160 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 VAV2P52735 878 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 TGFBRAP1Q8WUH2 860 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 CLSTN2Q9H4D0 955 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 DNM3Q9UQ16 869 aa12.52□□□□□ -0.41
PTCH1-205ENST00000418258 UHRF1BP1Q6BDS2 1440 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 A0A1B0GVL5 298 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 HSPA1LP34931 641 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 SATB1Q01826 763 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 CASC4Q6P4E1 433 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.51□□□□□ -0.413e-7■■■■■ 56.2
PTCH1-205ENST00000418258 NOL3O60936 208 aaKnown RBP12.51□□□□□ -0.41
PTCH1-205ENST00000418258 CLUL1Q15846 466 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 ASIC2Q16515 512 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 VWA3BQ502W6 1294 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 ARHGEF16Q5VV41 709 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 UBL4BQ8N7F7 174 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 RNF169Q8NCN4 708 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 METTL22Q9BUU2 404 aaPredicted RBP12.51□□□□□ -0.41
PTCH1-205ENST00000418258 POLR2DO15514 142 aaKnown RBP12.51□□□□□ -0.41
PTCH1-205ENST00000418258 KRT24Q2M2I5 525 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 DCUN1D2Q6PH85 259 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 PCDHB15Q9Y5E8 787 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 NR1I2O75469 434 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 RAD51AP2Q09MP3 1159 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 UTP11Q9Y3A2 253 aaKnown RBP12.51□□□□□ -0.41
PTCH1-205ENST00000418258 RIOK3O14730 519 aaKnown RBP12.51□□□□□ -0.41
PTCH1-205ENST00000418258 PPP1R2P41236 205 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 CCDC122Q5T0U0 273 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 CEP128Q6ZU80 1094 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 GPATCH11Q8N954 259 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 GLG1Q92896 1179 aa12.51□□□□□ -0.41
PTCH1-205ENST00000418258 RHOXF2BP0C7M4 288 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 RHOXF2Q9BQY4 288 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 CACYBPQ9HB71 228 aaKnown RBP12.5□□□□□ -0.41
PTCH1-205ENST00000418258 DDX21Q9NR30 783 aaKnown RBP eCLIP12.5□□□□□ -0.41
PTCH1-205ENST00000418258 USTQ9Y2C2 406 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 AFG3L2Q9Y4W6 797 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 CNGA4Q8IV77 575 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 TMEM87BQ96K49 555 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 V9GY48 417 aaPredicted RBP12.5□□□□□ -0.41
PTCH1-205ENST00000418258 ZFYVE9O95405 1425 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 MNAT1P51948 309 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 MED10Q9BTT4 135 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 GPAA1O43292 621 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 ADCY7P51828 1080 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 GPATCH8Q9UKJ3 1502 aaKnown RBP12.5□□□□□ -0.41
PTCH1-205ENST00000418258 KCNA6P17658 529 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 TBC1D8BQ0IIM8 1120 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 OTUD6AQ7L8S5 288 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 VPS16Q9H269 839 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 AS3MTQ9HBK9 375 aa12.5□□□□□ -0.41
PTCH1-205ENST00000418258 AKR1B15C9JRZ8 316 aaPredicted RBP12.49□□□□□ -0.41
PTCH1-205ENST00000418258 ATP5DP30049 168 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 RNASE9P60153 205 aaKnown RBP12.49□□□□□ -0.41
PTCH1-205ENST00000418258 MAPKAPK5Q8IW41 473 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 NOC2LQ9Y3T9 749 aaKnown RBP12.49□□□□□ -0.41
PTCH1-205ENST00000418258 ZMYM3Q14202 1370 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 P4HA1P13674 534 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 NLRX1Q86UT6 975 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 ANGEL1Q9UNK9 670 aaKnown RBP12.49□□□□□ -0.41
PTCH1-205ENST00000418258 ERCC6LQ2NKX8 1250 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 TNNI3KQ59H18 835 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 CCDC121Q6ZUS5 278 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 FAM184BQ9ULE4 1060 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 FPGT-TNNI3KV9GXZ4 949 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 DCPSQ96C86 337 aaKnown RBP12.49□□□□□ -0.41
PTCH1-205ENST00000418258 DYNC1I1O14576 645 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 SORBS3O60504 671 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 AFAP1L2Q8N4X5 818 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 EYA2O00167 538 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 CTDSPL2Q05D32 466 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 SETDB1Q15047 1291 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 CCDC110Q8TBZ0 833 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 RSPH14Q9UHP6 348 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 TRPC6Q9Y210 931 aa12.49□□□□□ -0.41
PTCH1-205ENST00000418258 PRDM1O75626 825 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 TNFAIP1Q13829 316 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 RILPL1Q5EBL4 403 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 PRIMPOLQ96LW4 560 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 TTF2Q9UNY4 1162 aaKnown RBP12.48□□□□□ -0.41
PTCH1-205ENST00000418258 CETN3O15182 167 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 A1BGP04217 495 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 TNNI1P19237 187 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 TSPYL6Q8N831 410 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 NBPF3Q9H094 633 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 MLXIPQ9HAP2 919 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 NKIRAS1Q9NYS0 192 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 MROH5Q6ZUA9 1318 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 TESPA1A2RU30 521 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-205ENST00000418258 BCRP11274 1271 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 RPS6KB1P23443 525 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 TEKT1Q969V4 418 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 FAM193BQ96PV7 902 aaPredicted RBP12.48□□□□□ -0.41
PTCH1-205ENST00000418258 SAMD15Q9P1V8 674 aa12.48□□□□□ -0.41
PTCH1-205ENST00000418258 TPH2Q8IWU9 490 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 101.7 ms