RNA–Protein interactions for RNA: ENST00000417903.5

NDUFA3-205, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 3

Gene NDUFA3, Length 666 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-205ENST00000417903 TTC6Q86TZ1 520 aa18.31■□□□□ 0.52
NDUFA3-205ENST00000417903 TNS4Q8IZW8 715 aa18.31■□□□□ 0.52
NDUFA3-205ENST00000417903 OTUD7AQ8TE49 926 aaPredicted RBP18.31■□□□□ 0.52
NDUFA3-205ENST00000417903 PTPN18Q99952 460 aa18.31■□□□□ 0.52
NDUFA3-205ENST00000417903 TRIM34Q9BYJ4 488 aa18.31■□□□□ 0.52
NDUFA3-205ENST00000417903 SAP30BPQ9UHR5 308 aaKnown RBP18.31■□□□□ 0.52
NDUFA3-205ENST00000417903 MAST2Q6P0Q8 1798 aa18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 IGF2BP3O00425 579 aaKnown RBP eCLIP18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 CXCL11O14625 94 aa18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 SLURP2P0DP57 97 aa18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 PTPRAP18433 802 aa18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 NOM1Q5C9Z4 860 aaKnown RBP18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 CRACR2BQ8N4Y2 399 aaPredicted RBP18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 PI4K2BQ8TCG2 481 aa18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 BRI3BPQ8WY22 251 aa18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 STAP2Q9UGK3 403 aa18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 KCNH4Q9UQ05 1017 aa18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 ZHX2Q9Y6X8 837 aa18.3■□□□□ 0.52
NDUFA3-205ENST00000417903 FAM196BA6NMK8 535 aa18.29■□□□□ 0.52
NDUFA3-205ENST00000417903 ZFYP08048 801 aaPredicted RBP18.29■□□□□ 0.52
NDUFA3-205ENST00000417903 SALL3Q9BXA9 1300 aa18.28■□□□□ 0.52
NDUFA3-205ENST00000417903 RNF113AO15541 343 aaKnown RBP18.28■□□□□ 0.52
NDUFA3-205ENST00000417903 MBD4O95243 580 aa18.28■□□□□ 0.52
NDUFA3-205ENST00000417903 CAP2P40123 477 aa18.28■□□□□ 0.52
NDUFA3-205ENST00000417903 IRX6P78412 446 aaPredicted RBP18.28■□□□□ 0.52
NDUFA3-205ENST00000417903 SLFNL1Q499Z3 407 aa18.28■□□□□ 0.52
NDUFA3-205ENST00000417903 B4GALNT3Q6L9W6 998 aa18.28■□□□□ 0.52
NDUFA3-205ENST00000417903 LCORLQ8N3X6 602 aa18.28■□□□□ 0.52
NDUFA3-205ENST00000417903 ARMT1Q9H993 441 aa18.28■□□□□ 0.52
NDUFA3-205ENST00000417903 ZCCHC17Q9NP64 241 aaKnown RBP18.28■□□□□ 0.52
NDUFA3-205ENST00000417903 ATP8A2Q9NTI2 1148 aa18.28■□□□□ 0.52
NDUFA3-205ENST00000417903 MYO5AQ9Y4I1 1855 aaKnown RBP18.27■□□□□ 0.52
NDUFA3-205ENST00000417903 GPR25O00155 361 aa18.27■□□□□ 0.52
NDUFA3-205ENST00000417903 POLR3DP05423 398 aaPredicted RBP18.27■□□□□ 0.52
NDUFA3-205ENST00000417903 PDE1AP54750 535 aa18.27■□□□□ 0.52
NDUFA3-205ENST00000417903 NUCB1Q02818 461 aa18.27■□□□□ 0.52
NDUFA3-205ENST00000417903 CHD1LQ86WJ1 897 aa18.27■□□□□ 0.52
NDUFA3-205ENST00000417903 TBC1D2Q9BYX2 928 aa18.27■□□□□ 0.52
NDUFA3-205ENST00000417903 LNPKQ9C0E8 428 aa18.27■□□□□ 0.52
NDUFA3-205ENST00000417903 EHD4Q9H223 541 aa18.27■□□□□ 0.52
NDUFA3-205ENST00000417903 GINM1Q9NU53 330 aa18.27■□□□□ 0.52
NDUFA3-205ENST00000417903 SERPINB13Q9UIV8 391 aa18.27■□□□□ 0.52
NDUFA3-205ENST00000417903 AFG3L2Q9Y4W6 797 aa18.27■□□□□ 0.52
NDUFA3-205ENST00000417903 DOCK2Q92608 1830 aa18.26■□□□□ 0.51
NDUFA3-205ENST00000417903 DDRGK1Q96HY6 314 aa18.26■□□□□ 0.51
NDUFA3-205ENST00000417903 PUS7LQ9H0K6 701 aaKnown RBP18.26■□□□□ 0.51
NDUFA3-205ENST00000417903 DCP1AQ9NPI6 582 aaPredicted RBP18.26■□□□□ 0.51
NDUFA3-205ENST00000417903 MCM9Q9NXL9 1143 aa18.26■□□□□ 0.51
NDUFA3-205ENST00000417903 OTOFQ9HC10 1997 aa18.25■□□□□ 0.51
NDUFA3-205ENST00000417903 CHGBP05060 677 aa18.25■□□□□ 0.51
NDUFA3-205ENST00000417903 ASNSP08243 561 aa18.25■□□□□ 0.51
NDUFA3-205ENST00000417903 RRP1BQ14684 758 aaKnown RBP18.25■□□□□ 0.51
NDUFA3-205ENST00000417903 FASTKD5Q7L8L6 764 aaKnown RBP18.25■□□□□ 0.51
NDUFA3-205ENST00000417903 FAM43AQ8N2R8 423 aa18.25■□□□□ 0.51
NDUFA3-205ENST00000417903 SDR42E1Q8WUS8 393 aa18.25■□□□□ 0.51
NDUFA3-205ENST00000417903 ZNF296Q8WUU4 475 aaPredicted RBP18.25■□□□□ 0.51
NDUFA3-205ENST00000417903 APPBP2Q92624 585 aa18.25■□□□□ 0.51
NDUFA3-205ENST00000417903 R3HDMLQ9H3Y0 253 aa18.25■□□□□ 0.51
NDUFA3-205ENST00000417903 ZFYVE28Q9HCC9 887 aa18.25■□□□□ 0.51
NDUFA3-205ENST00000417903 TAOK2Q9UL54 1235 aa18.25■□□□□ 0.51
NDUFA3-205ENST00000417903 USP17L5A8MUK1 530 aa18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 BTBD19C9JJ37 291 aa18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 PRKAB2O43741 272 aa18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 FKTNO75072 461 aa18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 PLCD1P51178 756 aa18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 CRHR2Q13324 411 aa18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 TAF1CQ15572 869 aaPredicted RBP18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 SLC4A8Q2Y0W8 1093 aa18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 TATDN1Q6P1N9 297 aa18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 ANKRD23Q86SG2 305 aa18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 STRBPQ96SI9 672 aaKnown RBP18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 FSD1Q9BTV5 496 aa18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 DNAJC18Q9H819 358 aa18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 SLC4A4Q9Y6R1 1079 aa18.24■□□□□ 0.51
NDUFA3-205ENST00000417903 TICAM2Q86XR7 235 aa18.23■□□□□ 0.51
NDUFA3-205ENST00000417903 AMOTL1Q8IY63 956 aa18.23■□□□□ 0.51
NDUFA3-205ENST00000417903 ZNF280CQ8ND82 737 aa18.23■□□□□ 0.51
NDUFA3-205ENST00000417903 OSBP2Q969R2 916 aa18.23■□□□□ 0.51
NDUFA3-205ENST00000417903 EVI5LQ96CN4 794 aa18.23■□□□□ 0.51
NDUFA3-205ENST00000417903 AS3MTQ9HBK9 375 aa18.23■□□□□ 0.51
NDUFA3-205ENST00000417903 A0A0G2JLL6 359 aaPredicted RBP18.22■□□□□ 0.51
NDUFA3-205ENST00000417903 TRIM75PA6NK02 468 aa18.22■□□□□ 0.51
NDUFA3-205ENST00000417903 SPP2Q13103 211 aa18.22■□□□□ 0.51
NDUFA3-205ENST00000417903 MOGSQ13724 837 aa18.22■□□□□ 0.51
NDUFA3-205ENST00000417903 PRRT2Q7Z6L0 340 aaPredicted RBP18.22■□□□□ 0.51
NDUFA3-205ENST00000417903 WDR18Q9BV38 432 aa18.22■□□□□ 0.51
NDUFA3-205ENST00000417903 PDHXO00330 501 aa18.21■□□□□ 0.51
NDUFA3-205ENST00000417903 GNAT2P19087 354 aa18.21■□□□□ 0.51
NDUFA3-205ENST00000417903 CERKLQ49MI3 558 aaPredicted RBP18.21■□□□□ 0.51
NDUFA3-205ENST00000417903 GIMAP6Q6P9H5 292 aa18.21■□□□□ 0.51
NDUFA3-205ENST00000417903 CTU1Q7Z7A3 348 aaKnown RBP18.21■□□□□ 0.51
NDUFA3-205ENST00000417903 OSBPL3Q9H4L5 887 aa18.21■□□□□ 0.51
NDUFA3-205ENST00000417903 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.21■□□□□ 0.51
NDUFA3-205ENST00000417903 USP17L12C9JPN9 530 aa18.2■□□□□ 0.5
NDUFA3-205ENST00000417903 USP17L21D6R901 530 aa18.2■□□□□ 0.5
NDUFA3-205ENST00000417903 JAG1P78504 1218 aa18.2■□□□□ 0.5
NDUFA3-205ENST00000417903 GABPAQ06546 454 aa18.2■□□□□ 0.5
NDUFA3-205ENST00000417903 DGKZQ13574 1117 aa18.2■□□□□ 0.5
NDUFA3-205ENST00000417903 IFFO2Q5TF58 517 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms