RNA–Protein interactions for RNA: ENST00000417665.5

NPHP1-204, Transcript of nephrocystin 1, humanhuman

TSL 5 BASIC

Gene NPHP1, Length 2,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-204ENST00000417665 ADCK5Q3MIX3 580 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 ISM2Q6H9L7 571 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 MICALCLQ6ZW33 695 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 CCDC50Q8IVM0 306 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 ARMC2Q8NEN0 867 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 CALR3Q96L12 384 aaKnown RBP6.72□□□□□ -1.33
NPHP1-204ENST00000417665 CLIC6Q96NY7 704 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 SDF4Q9BRK5 362 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 NMRK2Q9NPI5 230 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 KIAA1468Q9P260 1216 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 FAM208AQ9UK61 1670 aaKnown RBP6.72□□□□□ -1.33
NPHP1-204ENST00000417665 TOGARAM1Q9Y4F4 1720 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 CTAGE15A4D2H0 777 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 LRRIQ3A6PVS8 624 aaPredicted RBP6.72□□□□□ -1.33
NPHP1-204ENST00000417665 MPHOSPH10O00566 681 aaKnown RBP6.72□□□□□ -1.33
NPHP1-204ENST00000417665 CTAGE8P0CG41 777 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 FNTAP49354 379 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 IRAK1P51617 712 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 VSNL1P62760 191 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 FSTL1Q12841 308 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 GRIK3Q13003 919 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 WHAMMP3Q1A5X7 153 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 CTAGE6Q86UF2 777 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 TMEM139Q8IV31 216 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 CTAGE4Q8IX94 777 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 OTUD6BQ8N6M0 293 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 IGSF22Q8N9C0 903 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 FSIP1Q8NA03 581 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 PI4K2BQ8TCG2 481 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 SPATS2LQ9NUQ6 558 aaKnown RBP6.72□□□□□ -1.33
NPHP1-204ENST00000417665 ETAA1Q9NY74 926 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 SPG7Q9UQ90 795 aa6.72□□□□□ -1.33
NPHP1-204ENST00000417665 KIAA1551Q9HCM1 1747 aa6.71□□□□□ -1.33
NPHP1-204ENST00000417665 EIF3HO15372 352 aaKnown RBP eCLIP6.71□□□□□ -1.34
NPHP1-204ENST00000417665 KIF5CO60282 957 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 SERPINC1P01008 464 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 NCAPHQ15003 741 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 NECTIN1Q15223 517 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 DPCR1Q3MIW9 517 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 WWC2Q6AWC2 1192 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 BLOC1S2Q6QNY1 142 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 YTHDF3Q7Z739 585 aaKnown RBP6.71□□□□□ -1.34
NPHP1-204ENST00000417665 MAGEC3Q8TD91 643 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 BCAS4Q8TDM0 211 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 MRPS27Q92552 414 aaKnown RBP6.71□□□□□ -1.34
NPHP1-204ENST00000417665 CAPS2Q9BXY5 557 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 ZSWIM4Q9H7M6 989 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 SUGCTQ9HAC7 445 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 SLC24A3Q9HC58 644 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 PUF60Q9UHX1 559 aaKnown RBP6.71□□□□□ -1.34
NPHP1-204ENST00000417665 WWC3Q9ULE0 1092 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 UBR3Q6ZT12 1888 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 KIF13BQ9NQT8 1826 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 C10orf71Q711Q0 1435 aa6.71□□□□□ -1.34
NPHP1-204ENST00000417665 SOS1Q07889 1333 aaPredicted RBP6.71□□□□□ -1.34
NPHP1-204ENST00000417665 A0A1W2PQ27 194 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 A0A1W2PQ64 194 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 A0A1W2PQD8 194 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 RTN2O75298 545 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 MAP4K4O95819 1239 aaPredicted RBP6.7□□□□□ -1.34
NPHP1-204ENST00000417665 CCDC175P0C221 793 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 EZRP15311 586 aaKnown RBP6.7□□□□□ -1.34
NPHP1-204ENST00000417665 HMGB2P26583 209 aaKnown RBP6.7□□□□□ -1.34
NPHP1-204ENST00000417665 AMPHP49418 695 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 SMTNP53814 917 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 RWDD2BP57060 319 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 TBC1D8BQ0IIM8 1120 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 CFAP100Q494V2 611 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 CREB3L3Q68CJ9 461 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 TTC19Q6DKK2 380 aaPredicted RBP6.7□□□□□ -1.34
NPHP1-204ENST00000417665 NAA16Q6N069 864 aaPredicted RBP6.7□□□□□ -1.34
NPHP1-204ENST00000417665 FMR1NBQ8N0W7 255 aaPredicted RBP6.7□□□□□ -1.34
NPHP1-204ENST00000417665 BRF1Q92994 677 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 TATDN2Q93075 761 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 KAT14Q9H8E8 782 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 CD248Q9HCU0 757 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 KLC4Q9NSK0 619 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 C4BP0C0L5 1744 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 A0A087WWV3 80 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 PNMA6EA0A0J9YXQ4 647 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 CTAGE9A4FU28 777 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 GOLGA6CA6NDK9 693 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 MYO1FO00160 1098 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 MEFVO15553 781 aaPredicted RBP6.7□□□□□ -1.34
NPHP1-204ENST00000417665 DTNBO60941 627 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 IPO7O95373 1038 aaKnown RBP6.7□□□□□ -1.34
NPHP1-204ENST00000417665 HMOX1P09601 288 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 RHOXF2BP0C7M4 288 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 GOLGA6DP0CG33 693 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 RPS6KB1P23443 525 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 LMOD1P29536 600 aaPredicted RBP6.7□□□□□ -1.34
NPHP1-204ENST00000417665 ADD1P35611 737 aaKnown RBP6.7□□□□□ -1.34
NPHP1-204ENST00000417665 ME1P48163 572 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 CDR1P51861 262 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 CLNS1AP54105 237 aaKnown RBP6.7□□□□□ -1.34
NPHP1-204ENST00000417665 SLC8A3P57103 927 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 INHBEP58166 350 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 STIM1Q13586 685 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 SKIDA1Q1XH10 827 aa6.7□□□□□ -1.34
NPHP1-204ENST00000417665 CEP85LQ5SZL2 805 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms