RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 TLR7Q9NYK1 1049 aaKnown RBP22.49■■□□□ 1.19
VPS16-204ENST00000417508 PHIPQ8WWQ0 1821 aa22.48■■□□□ 1.19
VPS16-204ENST00000417508 SLURP2P0DP57 97 aa22.48■■□□□ 1.19
VPS16-204ENST00000417508 BCRP11274 1271 aa22.48■■□□□ 1.19
VPS16-204ENST00000417508 GADL1Q6ZQY3 521 aa22.48■■□□□ 1.19
VPS16-204ENST00000417508 AACSQ86V21 672 aa22.48■■□□□ 1.19
VPS16-204ENST00000417508 RHPN1Q8TCX5 695 aa22.48■■□□□ 1.19
VPS16-204ENST00000417508 TGFBRAP1Q8WUH2 860 aa22.48■■□□□ 1.19
VPS16-204ENST00000417508 ZBTB40Q9NUA8 1239 aa22.48■■□□□ 1.19
VPS16-204ENST00000417508 RCAN3Q9UKA8 241 aa22.48■■□□□ 1.19
VPS16-204ENST00000417508 MAST2Q6P0Q8 1798 aa22.48■■□□□ 1.19
VPS16-204ENST00000417508 TNRC18O15417 2968 aaPredicted RBP22.47■■□□□ 1.19
VPS16-204ENST00000417508 MYO5AQ9Y4I1 1855 aaKnown RBP22.47■■□□□ 1.19
VPS16-204ENST00000417508 PTPRFP10586 1907 aa22.47■■□□□ 1.19
VPS16-204ENST00000417508 TRIM75PA6NK02 468 aa22.47■■□□□ 1.19
VPS16-204ENST00000417508 CYP7A1P22680 504 aa22.47■■□□□ 1.19
VPS16-204ENST00000417508 METTL16Q86W50 562 aaKnown RBP22.47■■□□□ 1.19
VPS16-204ENST00000417508 PROCA1Q8NCQ7 364 aaPredicted RBP22.47■■□□□ 1.19
VPS16-204ENST00000417508 GINM1Q9NU53 330 aa22.47■■□□□ 1.19
VPS16-204ENST00000417508 SRRDQ9UH36 339 aa22.47■■□□□ 1.19
VPS16-204ENST00000417508 RBBP6Q7Z6E9 1792 aaKnown RBP22.46■■□□□ 1.19
VPS16-204ENST00000417508 POTEFA5A3E0 1075 aa22.46■■□□□ 1.19
VPS16-204ENST00000417508 USP17L5A8MUK1 530 aa22.46■■□□□ 1.19
VPS16-204ENST00000417508 IDH1O75874 414 aaKnown RBP22.46■■□□□ 1.19
VPS16-204ENST00000417508 FMNL1O95466 1100 aaPredicted RBP22.46■■□□□ 1.19
VPS16-204ENST00000417508 CYP2C8P10632 490 aa22.46■■□□□ 1.19
VPS16-204ENST00000417508 MAP3K12Q12852 859 aa22.46■■□□□ 1.19
VPS16-204ENST00000417508 ADGRA1Q86SQ6 560 aa22.46■■□□□ 1.19
VPS16-204ENST00000417508 CLASRPQ8N2M8 674 aaKnown RBP22.46■■□□□ 1.19
VPS16-204ENST00000417508 ZNF280CQ8ND82 737 aa22.46■■□□□ 1.19
VPS16-204ENST00000417508 KIF1BPQ96EK5 621 aa22.46■■□□□ 1.19
VPS16-204ENST00000417508 TRIM47Q96LD4 638 aa22.46■■□□□ 1.19
VPS16-204ENST00000417508 AS3MTQ9HBK9 375 aa22.46■■□□□ 1.19
VPS16-204ENST00000417508 AGTPBP1Q9UPW5 1226 aa22.46■■□□□ 1.19
VPS16-204ENST00000417508 COG6Q9Y2V7 657 aa22.46■■□□□ 1.19
VPS16-204ENST00000417508 FAM196BA6NMK8 535 aa22.45■■□□□ 1.18
VPS16-204ENST00000417508 RAB11FIP3O75154 756 aa22.45■■□□□ 1.18
VPS16-204ENST00000417508 TTF1Q15361 905 aaPredicted RBP22.45■■□□□ 1.18
VPS16-204ENST00000417508 MAPKAPK5Q8IW41 473 aa22.45■■□□□ 1.18
VPS16-204ENST00000417508 PNMA3Q9UL41 463 aa22.45■■□□□ 1.18
VPS16-204ENST00000417508 FLT1P17948 1338 aa22.45■■□□□ 1.18
VPS16-204ENST00000417508 FCGRTP55899 365 aa22.44■■□□□ 1.18
VPS16-204ENST00000417508 SPP2Q13103 211 aa22.44■■□□□ 1.18
VPS16-204ENST00000417508 PRPF38BQ5VTL8 546 aaKnown RBP22.44■■□□□ 1.18
VPS16-204ENST00000417508 TRIM34Q9BYJ4 488 aa22.44■■□□□ 1.18
VPS16-204ENST00000417508 CDK5RAP2Q96SN8 1893 aa22.43■■□□□ 1.18
VPS16-204ENST00000417508 FOCADQ5VW36 1801 aa22.43■■□□□ 1.18
VPS16-204ENST00000417508 HLA-DOAP06340 250 aa22.43■■□□□ 1.18
VPS16-204ENST00000417508 ASNSP08243 561 aa22.43■■□□□ 1.18
VPS16-204ENST00000417508 OSBPP22059 807 aa22.43■■□□□ 1.18
VPS16-204ENST00000417508 CTGFP29279 349 aa22.43■■□□□ 1.18
VPS16-204ENST00000417508 PABPC4Q13310 644 aaKnown RBP eCLIP22.43■■□□□ 1.18
VPS16-204ENST00000417508 PDE3AQ14432 1141 aa22.43■■□□□ 1.18
VPS16-204ENST00000417508 CRACR2BQ8N4Y2 399 aaPredicted RBP22.43■■□□□ 1.18
VPS16-204ENST00000417508 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.43■■□□□ 1.18
VPS16-204ENST00000417508 WDR18Q9BV38 432 aa22.43■■□□□ 1.18
VPS16-204ENST00000417508 IL1RAPL2Q9NP60 686 aa22.43■■□□□ 1.18
VPS16-204ENST00000417508 SLC4A8Q2Y0W8 1093 aa22.42■■□□□ 1.18
VPS16-204ENST00000417508 SH3D19Q5HYK7 790 aa22.42■■□□□ 1.18
VPS16-204ENST00000417508 MAGEB6Q8N7X4 407 aa22.42■■□□□ 1.18
VPS16-204ENST00000417508 RAET1EQ8TD07 263 aa22.42■■□□□ 1.18
VPS16-204ENST00000417508 SMCR8Q8TEV9 937 aaPredicted RBP22.42■■□□□ 1.18
VPS16-204ENST00000417508 PALD1Q9ULE6 856 aa22.42■■□□□ 1.18
VPS16-204ENST00000417508 ATAD5Q96QE3 1844 aa22.41■■□□□ 1.18
VPS16-204ENST00000417508 HTTP42858 3142 aa22.41■■□□□ 1.18
VPS16-204ENST00000417508 IFIT2P09913 472 aaKnown RBP22.41■■□□□ 1.18
VPS16-204ENST00000417508 EN2P19622 333 aaPredicted RBP22.41■■□□□ 1.18
VPS16-204ENST00000417508 DYNLL1P63167 89 aaKnown RBP22.41■■□□□ 1.18
VPS16-204ENST00000417508 RRP1BQ14684 758 aaKnown RBP22.41■■□□□ 1.18
VPS16-204ENST00000417508 CCDC84Q86UT8 332 aaPredicted RBP22.41■■□□□ 1.18
VPS16-204ENST00000417508 SIRT2Q8IXJ6 389 aa22.41■■□□□ 1.18
VPS16-204ENST00000417508 ANTXR1Q9H6X2 564 aa22.41■■□□□ 1.18
VPS16-204ENST00000417508 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.41■■□□□ 1.18
VPS16-204ENST00000417508 ZSWIM8A7E2V4 1837 aa22.41■■□□□ 1.18
VPS16-204ENST00000417508 MYPNQ86TC9 1320 aa22.4■■□□□ 1.18
VPS16-204ENST00000417508 GRK4P32298 578 aa22.4■■□□□ 1.18
VPS16-204ENST00000417508 USP5P45974 858 aa22.4■■□□□ 1.18
VPS16-204ENST00000417508 SH3TC2Q8TF17 1288 aa22.4■■□□□ 1.18
VPS16-204ENST00000417508 MGAMO43451 1857 aa22.4■■□□□ 1.18
VPS16-204ENST00000417508 C19orf81C9J6K1 198 aa22.39■■□□□ 1.17
VPS16-204ENST00000417508 GCLCP48506 637 aaPredicted RBP22.39■■□□□ 1.17
VPS16-204ENST00000417508 HMGCS2P54868 508 aa22.39■■□□□ 1.17
VPS16-204ENST00000417508 TTC6Q86TZ1 520 aa22.39■■□□□ 1.17
VPS16-204ENST00000417508 MYH1P12882 1939 aa22.38■■□□□ 1.17
VPS16-204ENST00000417508 BACE1P56817 501 aa22.38■■□□□ 1.17
VPS16-204ENST00000417508 TREML2Q5T2D2 321 aa22.38■■□□□ 1.17
VPS16-204ENST00000417508 MIGA1Q8NAN2 632 aa22.38■■□□□ 1.17
VPS16-204ENST00000417508 DNAJC18Q9H819 358 aa22.38■■□□□ 1.17
VPS16-204ENST00000417508 SAP30BPQ9UHR5 308 aaKnown RBP22.38■■□□□ 1.17
VPS16-204ENST00000417508 NDUFB9Q9Y6M9 179 aa22.38■■□□□ 1.17
VPS16-204ENST00000417508 SIPA1L1O43166 1804 aa22.38■■□□□ 1.17
VPS16-204ENST00000417508 APBB1O00213 710 aa22.37■■□□□ 1.17
VPS16-204ENST00000417508 ECM2O94769 699 aaPredicted RBP22.37■■□□□ 1.17
VPS16-204ENST00000417508 FAM110CQ1W6H9 321 aa22.37■■□□□ 1.17
VPS16-204ENST00000417508 EHD4Q9H223 541 aa22.37■■□□□ 1.17
VPS16-204ENST00000417508 TMOD4Q9NZQ9 345 aa22.37■■□□□ 1.17
VPS16-204ENST00000417508 HOXA7P31268 230 aaPredicted RBP22.36■■□□□ 1.17
VPS16-204ENST00000417508 UBXN2AP68543 259 aa22.36■■□□□ 1.17
VPS16-204ENST00000417508 PRKCZQ05513 592 aa22.36■■□□□ 1.17
VPS16-204ENST00000417508 SLC9C2Q5TAH2 1124 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms