RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 MCMDC2Q4G0Z9 681 aa16.73■□□□□ 0.27
NCKIPSD-204ENST00000416649 SWT1Q5T5J6 900 aaKnown RBP16.73■□□□□ 0.27
NCKIPSD-204ENST00000416649 TTC19Q6DKK2 380 aaPredicted RBP16.73■□□□□ 0.27
NCKIPSD-204ENST00000416649 ANKRD13DQ6ZTN6 518 aa16.73■□□□□ 0.27
NCKIPSD-204ENST00000416649 CCDC85AQ96PX6 553 aaPredicted RBP16.73■□□□□ 0.27
NCKIPSD-204ENST00000416649 FAM169AQ9Y6X4 670 aa16.73■□□□□ 0.27
NCKIPSD-204ENST00000416649 CRYBG1Q9Y4K1 1723 aa16.72■□□□□ 0.27
NCKIPSD-204ENST00000416649 NCAPD2Q15021 1401 aa16.72■□□□□ 0.27
NCKIPSD-204ENST00000416649 LMO7Q8WWI1 1683 aa16.72■□□□□ 0.27
NCKIPSD-204ENST00000416649 CPDO75976 1380 aa16.72■□□□□ 0.27
NCKIPSD-204ENST00000416649 H0YHG0 523 aa16.72■□□□□ 0.27
NCKIPSD-204ENST00000416649 CPP00450 1065 aa16.72■□□□□ 0.27
NCKIPSD-204ENST00000416649 HMGB1P09429 215 aaKnown RBP16.72■□□□□ 0.27
NCKIPSD-204ENST00000416649 TBX2Q13207 712 aaPredicted RBP16.72■□□□□ 0.27
NCKIPSD-204ENST00000416649 TTLL7Q6ZT98 887 aa16.72■□□□□ 0.27
NCKIPSD-204ENST00000416649 RAI14Q9P0K7 980 aa16.72■□□□□ 0.27
NCKIPSD-204ENST00000416649 ASAP1Q9ULH1 1129 aa16.72■□□□□ 0.27
NCKIPSD-204ENST00000416649 ADGRG1Q9Y653 693 aa16.72■□□□□ 0.27
NCKIPSD-204ENST00000416649 AKR1B15C9JRZ8 316 aaPredicted RBP16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 ABL1P00519 1130 aa16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 UBE3BQ7Z3V4 1068 aa16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 PPFIBP1Q86W92 1011 aa16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 JPH2Q9BR39 696 aaPredicted RBP16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 TUBE1Q9UJT0 475 aa16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 PCDH11XQ9BZA7 1347 aa16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 PCDH11YQ9BZA8 1340 aa16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 COL5A2P05997 1499 aaPredicted RBP16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 GRM8O00222 908 aa16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 NEXNQ0ZGT2 675 aa16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 SAMSN1Q9NSI8 373 aaKnown RBP16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 SAMM50Q9Y512 469 aa16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 COL18A1P39060 1754 aa16.71■□□□□ 0.27
NCKIPSD-204ENST00000416649 ZNF609O15014 1411 aa16.7■□□□□ 0.26
NCKIPSD-204ENST00000416649 SYF2O95926 243 aaKnown RBP16.7■□□□□ 0.26
NCKIPSD-204ENST00000416649 EPHA10Q5JZY3 1008 aa16.7■□□□□ 0.26
NCKIPSD-204ENST00000416649 FOXP4Q8IVH2 680 aaPredicted RBP16.7■□□□□ 0.26
NCKIPSD-204ENST00000416649 GSPT2Q8IYD1 628 aaKnown RBP16.7■□□□□ 0.26
NCKIPSD-204ENST00000416649 ACRBPQ8NEB7 543 aa16.7■□□□□ 0.26
NCKIPSD-204ENST00000416649 CARD10Q9BWT7 1032 aa16.7■□□□□ 0.26
NCKIPSD-204ENST00000416649 GSCP56915 257 aaPredicted RBP16.7■□□□□ 0.26
NCKIPSD-204ENST00000416649 FAM107BQ9H098 131 aa16.7■□□□□ 0.26
NCKIPSD-204ENST00000416649 HOOK1Q9UJC3 728 aaKnown RBP16.7■□□□□ 0.26
NCKIPSD-204ENST00000416649 KDM3BQ7LBC6 1761 aa16.7■□□□□ 0.26
NCKIPSD-204ENST00000416649 NBPF26B4DH59 902 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 E7EWF7 191 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 TDO2P48775 406 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 HAND2P61296 217 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 FMR1Q06787 632 aaKnown RBP eCLIP16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 NBPF14Q5TI25 921 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 NBPF10Q6P3W6 841 aaKnown RBP16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 METTL16Q86W50 562 aaKnown RBP16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 NBPF15Q8N660 670 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 BCAS4Q8TDM0 211 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 NEUROD6Q96NK8 337 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 CRACR2AQ9BSW2 395 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 KAT14Q9H8E8 782 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 DONSONQ9NYP3 566 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 SALL1Q9NSC2 1324 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 TEX33O43247 280 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 BMP6P22004 513 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 INPP5BP32019 993 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 SETQ01105 290 aaPredicted RBP16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 CCDC102BQ68D86 513 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 KLHL10Q6JEL2 608 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 KCNV1Q6PIU1 500 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 SHC4Q6S5L8 630 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 CCDC148Q8NFR7 591 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 LINS1Q8NG48 757 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 NAPGQ99747 312 aaPredicted RBP16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 DBNLQ9UJU6 430 aaKnown RBP16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 USP8P40818 1118 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 KAZALD1Q96I82 304 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 AIFM3Q96NN9 605 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 TMOD3Q9NYL9 352 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 CAPN7Q9Y6W3 813 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 HEG1Q9ULI3 1381 aa16.69■□□□□ 0.26
NCKIPSD-204ENST00000416649 GOLGA8BA8MQT2 603 aa16.68■□□□□ 0.26
NCKIPSD-204ENST00000416649 GGCXP38435 758 aa16.68■□□□□ 0.26
NCKIPSD-204ENST00000416649 RBL2Q08999 1139 aa16.68■□□□□ 0.26
NCKIPSD-204ENST00000416649 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.68■□□□□ 0.26
NCKIPSD-204ENST00000416649 TEX13AQ9BXU3 409 aaPredicted RBP16.68■□□□□ 0.26
NCKIPSD-204ENST00000416649 SRCAPQ6ZRS2 3230 aa16.68■□□□□ 0.26
NCKIPSD-204ENST00000416649 STIM1Q13586 685 aa16.68■□□□□ 0.26
NCKIPSD-204ENST00000416649 FAM76AQ8TAV0 307 aa16.68■□□□□ 0.26
NCKIPSD-204ENST00000416649 ACSBG1Q96GR2 724 aa16.68■□□□□ 0.26
NCKIPSD-204ENST00000416649 KLF18A0A0U1RQI7 1052 aa16.67■□□□□ 0.26
NCKIPSD-204ENST00000416649 NEURL1BA8MQ27 555 aa16.67■□□□□ 0.26
NCKIPSD-204ENST00000416649 BRAPQ7Z569 592 aa16.67■□□□□ 0.26
NCKIPSD-204ENST00000416649 OVOS2A0A0G2JMS6 1433 aa16.67■□□□□ 0.26
NCKIPSD-204ENST00000416649 A0A087WZG4 1122 aa16.67■□□□□ 0.26
NCKIPSD-204ENST00000416649 ENC1O14682 589 aa16.67■□□□□ 0.26
NCKIPSD-204ENST00000416649 STX17P56962 302 aa16.67■□□□□ 0.26
NCKIPSD-204ENST00000416649 EXOSC10Q01780 885 aaKnown RBP16.67■□□□□ 0.26
NCKIPSD-204ENST00000416649 SLC39A14Q15043 492 aa16.67■□□□□ 0.26
NCKIPSD-204ENST00000416649 GBP6Q6ZN66 633 aa16.67■□□□□ 0.26
NCKIPSD-204ENST00000416649 CAPZA3Q96KX2 299 aa16.67■□□□□ 0.26
NCKIPSD-204ENST00000416649 DBNDD2Q9BQY9 259 aa16.67■□□□□ 0.26
NCKIPSD-204ENST00000416649 SHTN1A0MZ66 631 aa16.66■□□□□ 0.26
NCKIPSD-204ENST00000416649 GOLGA6CA6NDK9 693 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms