RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 ZBED3Q96IU2 234 aaPredicted RBP9.93□□□□□ -0.82
RBM39-208ENST00000416108 L3MBTL3Q96JM7 780 aaPredicted RBP9.93□□□□□ -0.82
RBM39-208ENST00000416108 UPF3BQ9BZI7 483 aaKnown RBP9.93□□□□□ -0.82
RBM39-208ENST00000416108 MKNK2Q9HBH9 465 aa9.93□□□□□ -0.82
RBM39-208ENST00000416108 DDX4Q9NQI0 724 aaKnown RBP9.93□□□□□ -0.82
RBM39-208ENST00000416108 PI4KBQ9UBF8 816 aa9.93□□□□□ -0.82
RBM39-208ENST00000416108 FAM198AQ9UFP1 575 aa9.93□□□□□ -0.82
RBM39-208ENST00000416108 SWAP70Q9UH65 585 aa9.93□□□□□ -0.82
RBM39-208ENST00000416108 MKRN1Q9UHC7 482 aaKnown RBP9.93□□□□□ -0.82
RBM39-208ENST00000416108 MYH6P13533 1939 aa9.93□□□□□ -0.82
RBM39-208ENST00000416108 NEDD4P46934 1319 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 ERICH2A1L162 156 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 B4E1Z4 1266 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 RANBP6O60518 1105 aaKnown RBP9.92□□□□□ -0.82
RBM39-208ENST00000416108 RPS6KB1P23443 525 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 EPHX2P34913 555 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 MCM2P49736 904 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 ANKRD1Q15327 319 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 STOX1Q6ZVD7 989 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 USP50Q70EL3 339 aaPredicted RBP9.92□□□□□ -0.82
RBM39-208ENST00000416108 DHX32Q7L7V1 743 aaKnown RBP9.92□□□□□ -0.82
RBM39-208ENST00000416108 TRPM4Q8TD43 1214 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 DCPSQ96C86 337 aaKnown RBP9.92□□□□□ -0.82
RBM39-208ENST00000416108 HOOK2Q96ED9 719 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 KIF2CQ99661 725 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 ZSWIM6Q9HCJ5 1215 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 PDRG1Q9NUG6 133 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 GGA3Q9NZ52 723 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 SERPINB13Q9UIV8 391 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 TAOK2Q9UL54 1235 aa9.92□□□□□ -0.82
RBM39-208ENST00000416108 DOCK1Q14185 1865 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 ATRNL1Q5VV63 1379 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 PITPNM2Q9BZ72 1349 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 TSPY2A6NKD2 308 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 ORC4O43929 436 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 EGFRP00533 1210 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 PLCD1P51178 756 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 EAPPQ56P03 285 aaPredicted RBP9.91□□□□□ -0.82
RBM39-208ENST00000416108 ANGEL2Q5VTE6 544 aaKnown RBP9.91□□□□□ -0.82
RBM39-208ENST00000416108 PNMA8AQ86V59 439 aaPredicted RBP9.91□□□□□ -0.82
RBM39-208ENST00000416108 IQCA1Q86XH1 822 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 FOXP4Q8IVH2 680 aaPredicted RBP9.91□□□□□ -0.82
RBM39-208ENST00000416108 CSRNP1Q96S65 589 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 UBAC1Q9BSL1 405 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 EHD4Q9H223 541 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 PPP2R3BQ9Y5P8 575 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 TAF6LQ9Y6J9 622 aa9.91□□□□□ -0.82
RBM39-208ENST00000416108 GREB1LQ9C091 1923 aaPredicted RBP9.9□□□□□ -0.82
RBM39-208ENST00000416108 WDR19Q8NEZ3 1342 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 TRPM7Q96QT4 1865 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 DDTLA6NHG4 134 aaPredicted RBP9.9□□□□□ -0.82
RBM39-208ENST00000416108 PRC1O43663 620 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 KDM4AO75164 1064 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 PRDM1O75626 825 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 TSPY3P0CV98 308 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 TSPY8P0CW00 308 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 CPA1P15085 419 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 CDK8P49336 464 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 RASA3Q14644 834 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 CCDC178Q5BJE1 867 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 C16orf86Q6ZW13 317 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 NOL8Q76FK4 1167 aaKnown RBP9.9□□□□□ -0.82
RBM39-208ENST00000416108 SULF1Q8IWU6 871 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 MB21D2Q8IYB1 491 aaPredicted RBP9.9□□□□□ -0.82
RBM39-208ENST00000416108 DYNLL2Q96FJ2 89 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 TMEM87BQ96K49 555 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 NBPF3Q9H094 633 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 TAF1DQ9H5J8 278 aaPredicted RBP9.9□□□□□ -0.82
RBM39-208ENST00000416108 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.9□□□□□ -0.82
RBM39-208ENST00000416108 HERC5Q9UII4 1024 aaKnown RBP9.9□□□□□ -0.82
RBM39-208ENST00000416108 CLEC11AQ9Y240 323 aa9.9□□□□□ -0.82
RBM39-208ENST00000416108 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.9□□□□□ -0.82
RBM39-208ENST00000416108 CNTNAP1P78357 1384 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 IFIT3O14879 490 aaKnown RBP9.89□□□□□ -0.83
RBM39-208ENST00000416108 FGRP09769 529 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 VEGFAP15692 232 aaPredicted RBP9.89□□□□□ -0.83
RBM39-208ENST00000416108 DCAF15Q66K64 600 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 NFXL1Q6ZNB6 911 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 Q6ZUG5 572 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 ZFPM1Q8IX07 1006 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 SLC44A5Q8NCS7 719 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 ZC3H15Q8WU90 426 aaKnown RBP9.89□□□□□ -0.83
RBM39-208ENST00000416108 SNX21Q969T3 373 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 CCDC17Q96LX7 622 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 TCEANC2Q96MN5 208 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 MTA3Q9BTC8 594 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 TMEM39BQ9GZU3 492 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 DEFB129Q9H1M3 183 aa9.89□□□□□ -0.83
RBM39-208ENST00000416108 NAP1L2Q9ULW6 460 aaPredicted RBP9.89□□□□□ -0.83
RBM39-208ENST00000416108 ASTN2O75129 1339 aaPredicted RBP9.88□□□□□ -0.83
RBM39-208ENST00000416108 K7ELQ4 463 aaPredicted RBP9.88□□□□□ -0.83
RBM39-208ENST00000416108 MPHOSPH10O00566 681 aaKnown RBP9.88□□□□□ -0.83
RBM39-208ENST00000416108 HSP90AA1P07900 732 aaKnown RBP9.88□□□□□ -0.83
RBM39-208ENST00000416108 NF2P35240 595 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 HIRAP54198 1017 aaPredicted RBP9.88□□□□□ -0.83
RBM39-208ENST00000416108 AK2P54819 239 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 TFAP4Q01664 338 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 EVX2Q03828 476 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 WTAPQ15007 396 aa9.88□□□□□ -0.83
RBM39-208ENST00000416108 SUPT20HL1Q3ZLR7 823 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms