RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CCDC160A6NGH7 325 aa14.48□□□□□ -0.09
SCN1B-202ENST00000415950 AFAP1L1Q8TED9 768 aa14.48□□□□□ -0.09
SCN1B-202ENST00000415950 APPBP2Q92624 585 aa14.48□□□□□ -0.09
SCN1B-202ENST00000415950 F8W031 263 aaPredicted RBP14.48□□□□□ -0.09
SCN1B-202ENST00000415950 STAMBPO95630 424 aa14.48□□□□□ -0.09
SCN1B-202ENST00000415950 CDC5LQ99459 802 aaKnown RBP14.48□□□□□ -0.09
SCN1B-202ENST00000415950 TSPY3P0CV98 308 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 TSPY8P0CW00 308 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 NAPAP54920 295 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 UTP14CQ5TAP6 766 aaKnown RBP14.47□□□□□ -0.09
SCN1B-202ENST00000415950 CCDC174Q6PII3 467 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 TTLL7Q6ZT98 887 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 IRS4O14654 1257 aaPredicted RBP14.47□□□□□ -0.09
SCN1B-202ENST00000415950 BAG3O95817 575 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 AKNAD1Q5T1N1 836 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 C6orf163Q5TEZ5 329 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 SYNRGQ9UMZ2 1314 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 BMP15O95972 392 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 UQCRFS1P1P0C7P4 283 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 RILPL1Q5EBL4 403 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 PPP4R3AQ6IN85 833 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 TMTC2Q8N394 836 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 ZNF526Q8TF50 670 aaPredicted RBP14.47□□□□□ -0.09
SCN1B-202ENST00000415950 CRNKL1Q9BZJ0 848 aaKnown RBP14.47□□□□□ -0.09
SCN1B-202ENST00000415950 SSH2Q76I76 1423 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 FAM135BQ49AJ0 1406 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 KCNK9Q9NPC2 374 aa14.47□□□□□ -0.09
SCN1B-202ENST00000415950 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.47□□□□□ -0.09
SCN1B-202ENST00000415950 KIF24Q5T7B8 1368 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 CUTAO60888 179 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 LIG3P49916 1009 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 GPR161Q8N6U8 529 aaKnown RBP14.46□□□□□ -0.09
SCN1B-202ENST00000415950 MLKLQ8NB16 471 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 TRIM31Q9BZY9 425 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 IQCGQ9H095 443 aaKnown RBP14.46□□□□□ -0.09
SCN1B-202ENST00000415950 DDX41Q9UJV9 622 aaKnown RBP14.46□□□□□ -0.09
SCN1B-202ENST00000415950 RCOR1Q9UKL0 485 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 TAF6LQ9Y6J9 622 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 KDM5AP29375 1690 aaKnown RBP14.46□□□□□ -0.09
SCN1B-202ENST00000415950 GOLGA6CA6NDK9 693 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 GOLGA6DP0CG33 693 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 PNMA6AP0CW24 399 aaPredicted RBP14.46□□□□□ -0.09
SCN1B-202ENST00000415950 CDC25AP30304 524 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 KRT2P35908 639 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 TNNI2P48788 182 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 ZCRB1Q8TBF4 217 aaKnown RBP14.46□□□□□ -0.09
SCN1B-202ENST00000415950 GOLGA6AQ9NYA3 693 aa14.46□□□□□ -0.09
SCN1B-202ENST00000415950 LDHCP07864 332 aa14.46□□□□□ -0.1
SCN1B-202ENST00000415950 ATP1A2P50993 1020 aa14.46□□□□□ -0.1
SCN1B-202ENST00000415950 CNNM2Q9H8M5 875 aa14.46□□□□□ -0.1
SCN1B-202ENST00000415950 SBNO1A3KN83 1393 aa14.46□□□□□ -0.1
SCN1B-202ENST00000415950 ZSCAN20P17040 1043 aaPredicted RBP14.45□□□□□ -0.1
SCN1B-202ENST00000415950 DDIT3P35638 169 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 RESTQ13127 1097 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 NAA25Q14CX7 972 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 RPGRQ92834 1020 aaKnown RBP14.45□□□□□ -0.1
SCN1B-202ENST00000415950 ACSBG1Q96GR2 724 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 COMMD10Q9Y6G5 202 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 PRDM15P57071 1507 aaPredicted RBP14.45□□□□□ -0.1
SCN1B-202ENST00000415950 MYCNP04198 464 aaPredicted RBP14.45□□□□□ -0.1
SCN1B-202ENST00000415950 ADORA1P30542 326 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 RAD51AP2Q09MP3 1159 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 LETM2Q2VYF4 491 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 ZNF710Q8N1W2 664 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 TBC1D5Q92609 795 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 BICD1Q96G01 975 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 SAMSN1Q9NSI8 373 aaKnown RBP14.45□□□□□ -0.1
SCN1B-202ENST00000415950 ZNF532Q9HCE3 1301 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 ITGA6P23229 1130 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 LONRF2Q1L5Z9 754 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 CCDC24Q8N4L8 307 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 AK9Q5TCS8 1911 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 EFCAB8A8MWE9 144 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 EEF2P13639 858 aaKnown RBP14.45□□□□□ -0.1
SCN1B-202ENST00000415950 TOB2Q14106 344 aaPredicted RBP14.45□□□□□ -0.1
SCN1B-202ENST00000415950 ANKS4BQ8N8V4 417 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 TTC14Q96N46 770 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 PARD6BQ9BYG5 372 aa14.45□□□□□ -0.1
SCN1B-202ENST00000415950 CMA1P23946 247 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 PLS1Q14651 629 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 DTHD1Q6ZMT9 781 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 GBP6Q6ZN66 633 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 FAM207AQ9NSI2 230 aaPredicted RBP14.44□□□□□ -0.1
SCN1B-202ENST00000415950 MCM9Q9NXL9 1143 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 FAN1Q9Y2M0 1017 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 TNRQ92752 1358 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 EXOC5O00471 708 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 CASP1P29466 404 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 STXBP4Q6ZWJ1 553 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 CSGALNACT2Q8N6G5 542 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 ARFGAP2Q8N6H7 521 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 LINC00301Q8NCQ3 95 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 UBLCP1Q8WVY7 318 aaPredicted RBP14.44□□□□□ -0.1
SCN1B-202ENST00000415950 NSRP1Q9H0G5 558 aaKnown RBP14.44□□□□□ -0.1
SCN1B-202ENST00000415950 TMEM232C9JQI7 657 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 RAPGEF1Q13905 1077 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 E2F4Q16254 413 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 GSTA5Q7RTV2 222 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 SLC35F6Q8N357 371 aa14.44□□□□□ -0.1
SCN1B-202ENST00000415950 FERMT2Q96AC1 680 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms