RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 SLF2Q8IX21 1173 aa16.35■□□□□ 0.21
CTHRC1-202ENST00000415886 C7orf61Q8IZ16 206 aa16.35■□□□□ 0.21
CTHRC1-202ENST00000415886 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.35■□□□□ 0.21
CTHRC1-202ENST00000415886 PNMA3Q9UL41 463 aa16.35■□□□□ 0.21
CTHRC1-202ENST00000415886 BCAR3O75815 825 aa16.34■□□□□ 0.21
CTHRC1-202ENST00000415886 GNAI3P08754 354 aa16.34■□□□□ 0.21
CTHRC1-202ENST00000415886 TIMM10P62072 90 aa16.34■□□□□ 0.21
CTHRC1-202ENST00000415886 TRIM32Q13049 653 aa16.34■□□□□ 0.21
CTHRC1-202ENST00000415886 SPP2Q13103 211 aa16.34■□□□□ 0.21
CTHRC1-202ENST00000415886 PROCA1Q8NCQ7 364 aaPredicted RBP16.34■□□□□ 0.21
CTHRC1-202ENST00000415886 ZNF384Q8TF68 577 aa16.34■□□□□ 0.21
CTHRC1-202ENST00000415886 COPRSQ9NQ92 184 aa16.34■□□□□ 0.21
CTHRC1-202ENST00000415886 ZMYND8Q9ULU4 1186 aaPredicted RBP16.34■□□□□ 0.21
CTHRC1-202ENST00000415886 PDS5AQ29RF7 1337 aaKnown RBP16.34■□□□□ 0.21
CTHRC1-202ENST00000415886 DOCK3Q8IZD9 2030 aa16.34■□□□□ 0.21
CTHRC1-202ENST00000415886 ATAD5Q96QE3 1844 aa16.33■□□□□ 0.21
CTHRC1-202ENST00000415886 GPR75-ASB3A0A0A6YYF3 556 aa16.33■□□□□ 0.2
CTHRC1-202ENST00000415886 TBC1D12O60347 775 aa16.33■□□□□ 0.2
CTHRC1-202ENST00000415886 HMGCRP04035 888 aa16.33■□□□□ 0.2
CTHRC1-202ENST00000415886 HMGCS2P54868 508 aa16.33■□□□□ 0.2
CTHRC1-202ENST00000415886 ZKSCAN2Q63HK3 967 aa16.33■□□□□ 0.2
CTHRC1-202ENST00000415886 SPTY2D1Q68D10 685 aaPredicted RBP16.33■□□□□ 0.2
CTHRC1-202ENST00000415886 ATF7IPQ6VMQ6 1270 aa16.33■□□□□ 0.2
CTHRC1-202ENST00000415886 ZNF280CQ8ND82 737 aa16.33■□□□□ 0.2
CTHRC1-202ENST00000415886 GDF15Q99988 308 aa16.33■□□□□ 0.2
CTHRC1-202ENST00000415886 OSBPL5Q9H0X9 879 aaPredicted RBP16.33■□□□□ 0.2
CTHRC1-202ENST00000415886 A0A1B0GUL7 405 aa16.32■□□□□ 0.2
CTHRC1-202ENST00000415886 GCLCP48506 637 aaPredicted RBP16.32■□□□□ 0.2
CTHRC1-202ENST00000415886 RRP1BQ14684 758 aaKnown RBP16.32■□□□□ 0.2
CTHRC1-202ENST00000415886 DDX60LQ5H9U9 1706 aaKnown RBP16.32■□□□□ 0.2
CTHRC1-202ENST00000415886 ERICH6Q7L0X2 663 aa16.32■□□□□ 0.2
CTHRC1-202ENST00000415886 ANKLE1Q8NAG6 615 aa16.32■□□□□ 0.2
CTHRC1-202ENST00000415886 CLUAP1Q96AJ1 413 aa16.32■□□□□ 0.2
CTHRC1-202ENST00000415886 XAGE2Q96GT9 111 aa16.32■□□□□ 0.2
CTHRC1-202ENST00000415886 ASCC2Q9H1I8 757 aaPredicted RBP16.32■□□□□ 0.2
CTHRC1-202ENST00000415886 GJD2Q9UKL4 321 aa16.32■□□□□ 0.2
CTHRC1-202ENST00000415886 ZBED9Q6R2W3 1325 aa16.31■□□□□ 0.2
CTHRC1-202ENST00000415886 RPTORQ8N122 1335 aa16.31■□□□□ 0.2
CTHRC1-202ENST00000415886 SYN1P17600 705 aa16.31■□□□□ 0.2
CTHRC1-202ENST00000415886 BMP8BP34820 402 aa16.31■□□□□ 0.2
CTHRC1-202ENST00000415886 MNX1P50219 401 aaPredicted RBP16.31■□□□□ 0.2
CTHRC1-202ENST00000415886 TFCP2Q12800 502 aa16.31■□□□□ 0.2
CTHRC1-202ENST00000415886 PI16Q6UXB8 463 aa16.31■□□□□ 0.2
CTHRC1-202ENST00000415886 MEIS3Q99687 375 aa16.31■□□□□ 0.2
CTHRC1-202ENST00000415886 HMX1Q9NP08 348 aaPredicted RBP16.31■□□□□ 0.2
CTHRC1-202ENST00000415886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.31■□□□□ 0.2
CTHRC1-202ENST00000415886 PLXNB2O15031 1838 aa16.31■□□□□ 0.2
CTHRC1-202ENST00000415886 COL2A1P02458 1487 aaPredicted RBP16.3■□□□□ 0.2
CTHRC1-202ENST00000415886 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
CTHRC1-202ENST00000415886 CAP2P40123 477 aa16.3■□□□□ 0.2
CTHRC1-202ENST00000415886 PABPC4Q13310 644 aaKnown RBP eCLIP16.3■□□□□ 0.2
CTHRC1-202ENST00000415886 MVPQ14764 893 aaKnown RBP16.3■□□□□ 0.2
CTHRC1-202ENST00000415886 TRIB2Q92519 343 aa16.3■□□□□ 0.2
CTHRC1-202ENST00000415886 NBPF3Q9H094 633 aa16.3■□□□□ 0.2
CTHRC1-202ENST00000415886 HMG20BQ9P0W2 317 aa16.3■□□□□ 0.2
CTHRC1-202ENST00000415886 USP17L5A8MUK1 530 aa16.29■□□□□ 0.2
CTHRC1-202ENST00000415886 TRIM27P14373 513 aa16.29■□□□□ 0.2
CTHRC1-202ENST00000415886 SH3D19Q5HYK7 790 aa16.29■□□□□ 0.2
CTHRC1-202ENST00000415886 TBC1D9Q6ZT07 1266 aa16.29■□□□□ 0.2
CTHRC1-202ENST00000415886 FTSJ3Q8IY81 847 aaKnown RBP16.29■□□□□ 0.2
CTHRC1-202ENST00000415886 NSUN4Q96CB9 384 aaKnown RBP16.29■□□□□ 0.2
CTHRC1-202ENST00000415886 TBC1D2Q9BYX2 928 aa16.29■□□□□ 0.2
CTHRC1-202ENST00000415886 C11orf49Q9H6J7 331 aa16.29■□□□□ 0.2
CTHRC1-202ENST00000415886 PEX10O60683 326 aa16.28■□□□□ 0.2
CTHRC1-202ENST00000415886 GNAI2P04899 355 aa16.28■□□□□ 0.2
CTHRC1-202ENST00000415886 CYP2B6P20813 491 aa16.28■□□□□ 0.2
CTHRC1-202ENST00000415886 MAGEA10P43363 369 aaPredicted RBP16.28■□□□□ 0.2
CTHRC1-202ENST00000415886 Q7L0L9 218 aa16.28■□□□□ 0.2
CTHRC1-202ENST00000415886 DEFB123Q8N688 67 aa16.28■□□□□ 0.2
CTHRC1-202ENST00000415886 NEUROD6Q96NK8 337 aa16.28■□□□□ 0.2
CTHRC1-202ENST00000415886 MORF4L1Q9UBU8 362 aa16.28■□□□□ 0.2
CTHRC1-202ENST00000415886 AKAP2Q9Y2D5 859 aa16.28■□□□□ 0.2
CTHRC1-202ENST00000415886 SIPA1L1O43166 1804 aa16.28■□□□□ 0.2
CTHRC1-202ENST00000415886 SRGAP3O43295 1099 aa16.27■□□□□ 0.2
CTHRC1-202ENST00000415886 LDHCP07864 332 aa16.27■□□□□ 0.2
CTHRC1-202ENST00000415886 GSTO1P78417 241 aa16.27■□□□□ 0.2
CTHRC1-202ENST00000415886 MTMR2Q13614 643 aa16.27■□□□□ 0.2
CTHRC1-202ENST00000415886 TEX11Q8IYF3 940 aa16.27■□□□□ 0.2
CTHRC1-202ENST00000415886 SPATA5Q8NB90 893 aa16.27■□□□□ 0.2
CTHRC1-202ENST00000415886 AS3MTQ9HBK9 375 aa16.27■□□□□ 0.2
CTHRC1-202ENST00000415886 RAI14Q9P0K7 980 aa16.27■□□□□ 0.2
CTHRC1-202ENST00000415886 OGDHLQ9ULD0 1010 aa16.27■□□□□ 0.2
CTHRC1-202ENST00000415886 PFASO15067 1338 aa16.26■□□□□ 0.19
CTHRC1-202ENST00000415886 MAP4K4O95819 1239 aaPredicted RBP16.26■□□□□ 0.19
CTHRC1-202ENST00000415886 PRKAR2AP13861 404 aaKnown RBP16.26■□□□□ 0.19
CTHRC1-202ENST00000415886 IRX3P78415 501 aaPredicted RBP16.26■□□□□ 0.19
CTHRC1-202ENST00000415886 MAP3K21Q5TCX8 1036 aa16.26■□□□□ 0.19
CTHRC1-202ENST00000415886 GPR153Q6NV75 609 aa16.26■□□□□ 0.19
CTHRC1-202ENST00000415886 SH3RF3Q8TEJ3 882 aaPredicted RBP16.26■□□□□ 0.19
CTHRC1-202ENST00000415886 TXNRD2Q9NNW7 524 aa16.26■□□□□ 0.19
CTHRC1-202ENST00000415886 HERC5Q9UII4 1024 aaKnown RBP16.26■□□□□ 0.19
CTHRC1-202ENST00000415886 LAMA3Q16787 3333 aa16.26■□□□□ 0.19
CTHRC1-202ENST00000415886 ARID4AP29374 1257 aaPredicted RBP16.25■□□□□ 0.19
CTHRC1-202ENST00000415886 MCAMP43121 646 aa16.25■□□□□ 0.19
CTHRC1-202ENST00000415886 BACE1P56817 501 aa16.25■□□□□ 0.19
CTHRC1-202ENST00000415886 JAG1P78504 1218 aa16.25■□□□□ 0.19
CTHRC1-202ENST00000415886 SHROOM1Q2M3G4 852 aaPredicted RBP16.25■□□□□ 0.19
CTHRC1-202ENST00000415886 LRIT3Q3SXY7 679 aa16.25■□□□□ 0.19
CTHRC1-202ENST00000415886 GORABQ5T7V8 394 aa16.25■□□□□ 0.19
CTHRC1-202ENST00000415886 TDHQ8IZJ6 230 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms