RNA–Protein interactions for RNA: ENST00000415609.6

UBA3-203, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 5 BASIC

Gene UBA3, Length 2,004 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-203ENST00000415609 BIN1O00499 593 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 RPS6KA4O75676 772 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 MMP1P03956 469 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 SYKP43405 635 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 RPS8P62241 208 aaKnown RBP14.28□□□□□ -0.12
UBA3-203ENST00000415609 LRMPQ12912 555 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 DPCR1Q3MIW9 517 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 NOSTRINQ8IVI9 506 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 CCDC24Q8N4L8 307 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 FANCBQ8NB91 859 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 MRFAP1L1Q96HT8 127 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 KCNJ14Q9UNX9 436 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 BTAF1O14981 1849 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 DUOX1Q9NRD9 1551 aa14.28□□□□□ -0.12
UBA3-203ENST00000415609 CYP2D7A0A087X1C5 515 aa14.27□□□□□ -0.12
UBA3-203ENST00000415609 SMIM22K7EJ46 135 aa14.27□□□□□ -0.12
UBA3-203ENST00000415609 SEMA3EO15041 775 aa14.27□□□□□ -0.12
UBA3-203ENST00000415609 DEXIO95424 95 aa14.27□□□□□ -0.12
UBA3-203ENST00000415609 RCAN1P53805 252 aa14.27□□□□□ -0.12
UBA3-203ENST00000415609 RC3H1Q5TC82 1133 aaKnown RBP14.27□□□□□ -0.12
UBA3-203ENST00000415609 SHC4Q6S5L8 630 aa14.27□□□□□ -0.12
UBA3-203ENST00000415609 DIS3L2Q8IYB7 885 aaKnown RBP14.27□□□□□ -0.12
UBA3-203ENST00000415609 FBXO41Q8TF61 875 aa14.27□□□□□ -0.12
UBA3-203ENST00000415609 BRIP1Q9BX63 1249 aa14.27□□□□□ -0.12
UBA3-203ENST00000415609 COL24A1Q17RW2 1714 aa14.27□□□□□ -0.12
UBA3-203ENST00000415609 MYH13Q9UKX3 1938 aa14.27□□□□□ -0.12
UBA3-203ENST00000415609 BTBD18B2RXH4 712 aa14.27□□□□□ -0.13
UBA3-203ENST00000415609 FBXO33Q7Z6M2 555 aa14.27□□□□□ -0.13
UBA3-203ENST00000415609 NBPF11Q86T75 865 aa14.27□□□□□ -0.13
UBA3-203ENST00000415609 CRACR2BQ8N4Y2 399 aaPredicted RBP14.27□□□□□ -0.13
UBA3-203ENST00000415609 CERKQ8TCT0 537 aa14.27□□□□□ -0.13
UBA3-203ENST00000415609 CLIC6Q96NY7 704 aa14.27□□□□□ -0.13
UBA3-203ENST00000415609 TFCP2L1Q9NZI6 479 aa14.27□□□□□ -0.13
UBA3-203ENST00000415609 CCNL1Q9UK58 526 aaPredicted RBP14.27□□□□□ -0.13
UBA3-203ENST00000415609 BAZ2AQ9UIF9 1905 aaKnown RBP14.27□□□□□ -0.13
UBA3-203ENST00000415609 NPHP1O15259 732 aa14.26□□□□□ -0.13
UBA3-203ENST00000415609 CUTAO60888 179 aa14.26□□□□□ -0.13
UBA3-203ENST00000415609 NLRP12P59046 1061 aa14.26□□□□□ -0.13
UBA3-203ENST00000415609 SEC23AQ15436 765 aa14.26□□□□□ -0.13
UBA3-203ENST00000415609 CCDC144BQ3MJ40 725 aa14.26□□□□□ -0.13
UBA3-203ENST00000415609 ZNF384Q8TF68 577 aa14.26□□□□□ -0.13
UBA3-203ENST00000415609 TIGD1Q96MW7 591 aa14.26□□□□□ -0.13
UBA3-203ENST00000415609 ANKRD2Q9GZV1 360 aa14.26□□□□□ -0.13
UBA3-203ENST00000415609 RTCBQ9Y3I0 505 aaKnown RBP14.26□□□□□ -0.13
UBA3-203ENST00000415609 HIBADHP31937 336 aaKnown RBP14.25□□□□□ -0.13
UBA3-203ENST00000415609 RBM6P78332 1123 aaKnown RBP14.25□□□□□ -0.13
UBA3-203ENST00000415609 CHAF1AQ13111 956 aaPredicted RBP14.25□□□□□ -0.13
UBA3-203ENST00000415609 RESP18Q5W5W9 173 aa14.25□□□□□ -0.13
UBA3-203ENST00000415609 TPTE2Q6XPS3 522 aa14.25□□□□□ -0.13
UBA3-203ENST00000415609 PRIMPOLQ96LW4 560 aa14.25□□□□□ -0.13
UBA3-203ENST00000415609 ZSCAN10Q96SZ4 725 aaPredicted RBP14.25□□□□□ -0.13
UBA3-203ENST00000415609 BPIFA3Q9BQP9 254 aa14.25□□□□□ -0.13
UBA3-203ENST00000415609 HPSEQ9Y251 543 aa14.25□□□□□ -0.13
UBA3-203ENST00000415609 PRDM1O75626 825 aa14.25□□□□□ -0.13
UBA3-203ENST00000415609 AKAP17AQ02040 695 aaKnown RBP14.25□□□□□ -0.13
UBA3-203ENST00000415609 MECOMQ03112 1051 aa14.25□□□□□ -0.13
UBA3-203ENST00000415609 FAM182BQ5T319 152 aa14.25□□□□□ -0.13
UBA3-203ENST00000415609 IFIT1BQ5T764 474 aaKnown RBP14.25□□□□□ -0.13
UBA3-203ENST00000415609 ENAHQ8N8S7 591 aaPredicted RBP14.25□□□□□ -0.13
UBA3-203ENST00000415609 CACTINQ8WUQ7 758 aaKnown RBP14.25□□□□□ -0.13
UBA3-203ENST00000415609 NSUN4Q96CB9 384 aaKnown RBP14.25□□□□□ -0.13
UBA3-203ENST00000415609 FOXP1Q9H334 677 aaPredicted RBP14.25□□□□□ -0.13
UBA3-203ENST00000415609 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.25□□□□□ -0.13
UBA3-203ENST00000415609 NHSQ6T4R5 1651 aa14.24□□□□□ -0.13
UBA3-203ENST00000415609 TPM4P67936 248 aa14.24□□□□□ -0.13
UBA3-203ENST00000415609 CTR9Q6PD62 1173 aa14.24□□□□□ -0.13
UBA3-203ENST00000415609 CATIPQ7Z7H3 387 aa14.24□□□□□ -0.13
UBA3-203ENST00000415609 IQCA1Q86XH1 822 aa14.24□□□□□ -0.13
UBA3-203ENST00000415609 KRI1Q8N9T8 703 aaKnown RBP14.24□□□□□ -0.13
UBA3-203ENST00000415609 AATFQ9NY61 560 aaKnown RBP eCLIP14.24□□□□□ -0.13
UBA3-203ENST00000415609 PDS5AQ29RF7 1337 aaKnown RBP14.24□□□□□ -0.13
UBA3-203ENST00000415609 MYH2Q9UKX2 1941 aa14.24□□□□□ -0.13
UBA3-203ENST00000415609 DYNC1I1O14576 645 aa14.24□□□□□ -0.13
UBA3-203ENST00000415609 HSP90AA2PQ14568 343 aaPredicted RBP14.24□□□□□ -0.13
UBA3-203ENST00000415609 RILPL1Q5EBL4 403 aa14.24□□□□□ -0.13
UBA3-203ENST00000415609 ISM2Q6H9L7 571 aa14.24□□□□□ -0.13
UBA3-203ENST00000415609 MYRIPQ8NFW9 859 aa14.24□□□□□ -0.13
UBA3-203ENST00000415609 RNF26Q9BY78 433 aaPredicted RBP14.24□□□□□ -0.13
UBA3-203ENST00000415609 CRNKL1Q9BZJ0 848 aaKnown RBP14.24□□□□□ -0.13
UBA3-203ENST00000415609 FAM237AA0A1B0GTK4 181 aa14.23□□□□□ -0.13
UBA3-203ENST00000415609 USP17L12C9JPN9 530 aa14.23□□□□□ -0.13
UBA3-203ENST00000415609 USP17L21D6R901 530 aa14.23□□□□□ -0.13
UBA3-203ENST00000415609 UBAP1LF5GYI3 381 aa14.23□□□□□ -0.13
UBA3-203ENST00000415609 RRP9O43818 475 aaKnown RBP14.23□□□□□ -0.13
UBA3-203ENST00000415609 PCP11498 1178 aaKnown RBP14.23□□□□□ -0.13
UBA3-203ENST00000415609 TOB1P50616 345 aaPredicted RBP14.23□□□□□ -0.13
UBA3-203ENST00000415609 NR5A1Q13285 461 aa14.23□□□□□ -0.13
UBA3-203ENST00000415609 PPP2R5BQ15173 497 aa14.23□□□□□ -0.13
UBA3-203ENST00000415609 FILIP1Q7Z7B0 1213 aa14.23□□□□□ -0.13
UBA3-203ENST00000415609 ARHGEF1Q92888 912 aaKnown RBP14.23□□□□□ -0.13
UBA3-203ENST00000415609 USP21Q9UK80 565 aa14.23□□□□□ -0.13
UBA3-203ENST00000415609 KCNH3Q9ULD8 1083 aa14.23□□□□□ -0.13
UBA3-203ENST00000415609 MYH6P13533 1939 aa14.23□□□□□ -0.13
UBA3-203ENST00000415609 MAST2Q6P0Q8 1798 aa14.23□□□□□ -0.13
UBA3-203ENST00000415609 XBP1P17861 261 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 PRDX5P30044 214 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 RBM10P98175 930 aaKnown RBP14.22□□□□□ -0.13
UBA3-203ENST00000415609 PNOCQ13519 176 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 AMIGO3Q86WK7 504 aa14.22□□□□□ -0.13
UBA3-203ENST00000415609 CNNM3Q8NE01 707 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms