RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 PIM2Q9P1W9 311 aa13.49□□□□□ -0.25
RFFL-205ENST00000415395 MKRN1Q9UHC7 482 aaKnown RBP13.49□□□□□ -0.25
RFFL-205ENST00000415395 ANGEL1Q9UNK9 670 aaKnown RBP13.49□□□□□ -0.25
RFFL-205ENST00000415395 ECM29Q5VYK3 1845 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 B4E1Z4 1266 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 FIBPO43427 364 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 C21orf2O43822 256 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 ECE2O60344 883 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 KDM4AO75164 1064 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 LIFRP42702 1097 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 BTDP43251 543 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 USP5P45974 858 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 SART3Q15020 963 aaKnown RBP13.48□□□□□ -0.25
RFFL-205ENST00000415395 AMOTL1Q8IY63 956 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 ESR2Q92731 530 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 USP25Q9UHP3 1055 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 CD2APQ9Y5K6 639 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 ELP1O95163 1332 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 MYH1P12882 1939 aa13.48□□□□□ -0.25
RFFL-205ENST00000415395 FER1L6Q2WGJ9 1857 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 ROBO3Q96MS0 1386 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 MINDY4BA8MYZ0 360 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 SH2B2O14492 632 aaPredicted RBP13.47□□□□□ -0.25
RFFL-205ENST00000415395 HDLBPQ00341 1268 aaKnown RBP13.47□□□□□ -0.25
RFFL-205ENST00000415395 APOBRQ0VD83 1088 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 R3HDM1Q15032 1099 aaKnown RBP13.47□□□□□ -0.25
RFFL-205ENST00000415395 HHIPL2Q6UWX4 724 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 CYB5R4Q7L1T6 521 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 SGMS1Q86VZ5 419 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 NECAB1Q8N987 351 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 SGIP1Q9BQI5 828 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 FAM13BQ9NYF5 915 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
RFFL-205ENST00000415395 USP17L3A6NCW0 530 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 USP17L4A6NCW7 530 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 USP17L12C9JPN9 530 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 USP17L21D6R901 530 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 ORC4O43929 436 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 DHX16O60231 1041 aaKnown RBP13.47□□□□□ -0.25
RFFL-205ENST00000415395 PDIA3P30101 505 aaKnown RBP13.47□□□□□ -0.25
RFFL-205ENST00000415395 FOXD4L6Q3SYB3 417 aaPredicted RBP13.47□□□□□ -0.25
RFFL-205ENST00000415395 FOXD4L3Q6VB84 417 aaPredicted RBP13.47□□□□□ -0.25
RFFL-205ENST00000415395 CHST3Q7LGC8 479 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 USP17L1Q7RTZ2 530 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 TMTC2Q8N394 836 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 CERS5Q8N5B7 392 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 MYRIPQ8NFW9 859 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 SH3RF3Q8TEJ3 882 aaPredicted RBP13.47□□□□□ -0.25
RFFL-205ENST00000415395 DBNDD1Q9H9R9 158 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 ZSWIM5Q9P217 1185 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 ZNF219Q9P2Y4 722 aaPredicted RBP13.47□□□□□ -0.25
RFFL-205ENST00000415395 MTMR6Q9Y217 621 aa13.47□□□□□ -0.25
RFFL-205ENST00000415395 PPIP5K2O43314 1243 aa13.46□□□□□ -0.25
RFFL-205ENST00000415395 RCAN1P53805 252 aa13.46□□□□□ -0.25
RFFL-205ENST00000415395 SCRN1Q12765 414 aa13.46□□□□□ -0.25
RFFL-205ENST00000415395 NOLC1Q14978 699 aaKnown RBP eCLIP13.46□□□□□ -0.25
RFFL-205ENST00000415395 AOC3Q16853 763 aa13.46□□□□□ -0.25
RFFL-205ENST00000415395 DACT2Q5SW24 774 aa13.46□□□□□ -0.25
RFFL-205ENST00000415395 IGDCC4Q8TDY8 1250 aa13.46□□□□□ -0.25
RFFL-205ENST00000415395 FBXW7Q969H0 707 aa13.46□□□□□ -0.25
RFFL-205ENST00000415395 SCAND2PQ9GZW5 306 aaPredicted RBP13.46□□□□□ -0.25
RFFL-205ENST00000415395 TTF2Q9UNY4 1162 aaKnown RBP13.46□□□□□ -0.25
RFFL-205ENST00000415395 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.46□□□□□ -0.25
RFFL-205ENST00000415395 KIF3AQ9Y496 699 aa13.46□□□□□ -0.25
RFFL-205ENST00000415395 DAGLAQ9Y4D2 1042 aa13.46□□□□□ -0.25
RFFL-205ENST00000415395 NID2Q14112 1375 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 KLF18A0A0U1RQI7 1052 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 ERICH2A1L162 156 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 VPS37CA5D8V6 355 aaPredicted RBP13.45□□□□□ -0.26
RFFL-205ENST00000415395 GOLGA6L4A6NEF3 574 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 RHBDL3P58872 404 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 PDE4BQ07343 736 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 STK3Q13188 491 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 C12orf60Q5U649 245 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 TEX11Q8IYF3 940 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 SMARCC2Q8TAQ2 1214 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 TEKT1Q969V4 418 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 MCM9Q9NXL9 1143 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 TACC3Q9Y6A5 838 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 ARFGEF1Q9Y6D6 1849 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 MYO3BQ8WXR4 1341 aa13.45□□□□□ -0.26
RFFL-205ENST00000415395 IFIT3O14879 490 aaKnown RBP13.44□□□□□ -0.26
RFFL-205ENST00000415395 CAVIN2O95810 425 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 DALRD3Q5D0E6 543 aaKnown RBP13.44□□□□□ -0.26
RFFL-205ENST00000415395 TMEM67Q5HYA8 995 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 LARP1BQ659C4 914 aaKnown RBP13.44□□□□□ -0.26
RFFL-205ENST00000415395 TGFBRAP1Q8WUH2 860 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 LY9Q9HBG7 655 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 TOMM22Q9NS69 142 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 SPTLC3Q9NUV7 552 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 GOLGA8BA8MQT2 603 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 RBM10P98175 930 aaKnown RBP13.44□□□□□ -0.26
RFFL-205ENST00000415395 MAP3K11Q16584 847 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 RGS22Q8NE09 1264 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 ZDHHC15Q96MV8 337 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 UBAC1Q9BSL1 405 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 FUCA2Q9BTY2 467 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 NUP62CLQ9H1M0 184 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 ZNF287Q9HBT7 754 aa13.44□□□□□ -0.26
RFFL-205ENST00000415395 DDX19AQ9NUU7 478 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms