RNA–Protein interactions for RNA: ENST00000415022.1

CRAMP1-203, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-203ENST00000415022 ZNF112Q9UJU3 913 aa12.74□□□□□ -0.37
CRAMP1-203ENST00000415022 GSG1L2A8MUP6 293 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 CA12O43570 354 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 SDSP20132 328 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 TNNI2P48788 182 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 NMIQ13287 307 aaPredicted RBP12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 VPS53Q5VIR6 699 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 CCDC84Q86UT8 332 aaPredicted RBP12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 METTL16Q86W50 562 aaKnown RBP12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 C2orf69Q8N8R5 385 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 NKX2-3Q8TAU0 364 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 APPBP2Q92624 585 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 EVI5LQ96CN4 794 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 CCDC136Q96JN2 1154 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 CSRNP1Q96S65 589 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 FSD1Q9BTV5 496 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 TMOD2Q9NZR1 351 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 SNCAIPQ9Y6H5 919 aa12.73□□□□□ -0.37
CRAMP1-203ENST00000415022 SLC10A3P09131 477 aa12.72□□□□□ -0.37
CRAMP1-203ENST00000415022 VGLL4Q14135 290 aa12.72□□□□□ -0.37
CRAMP1-203ENST00000415022 RGMBQ6NW40 437 aa12.72□□□□□ -0.37
CRAMP1-203ENST00000415022 HHIPL1Q96JK4 782 aa12.72□□□□□ -0.37
CRAMP1-203ENST00000415022 PPP4R2Q9NY27 417 aa12.72□□□□□ -0.37
CRAMP1-203ENST00000415022 LAMA4Q16363 1823 aa12.72□□□□□ -0.37
CRAMP1-203ENST00000415022 GPAA1O43292 621 aa12.71□□□□□ -0.37
CRAMP1-203ENST00000415022 BAG3O95817 575 aa12.71□□□□□ -0.37
CRAMP1-203ENST00000415022 FKBP1BP68106 108 aa12.71□□□□□ -0.37
CRAMP1-203ENST00000415022 GABPAQ06546 454 aa12.71□□□□□ -0.37
CRAMP1-203ENST00000415022 SUPT20HL1Q3ZLR7 823 aa12.71□□□□□ -0.37
CRAMP1-203ENST00000415022 HABP4Q5JVS0 413 aaKnown RBP12.71□□□□□ -0.37
CRAMP1-203ENST00000415022 SLC44A5Q8NCS7 719 aa12.71□□□□□ -0.37
CRAMP1-203ENST00000415022 DYNLL2Q96FJ2 89 aa12.71□□□□□ -0.37
CRAMP1-203ENST00000415022 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.71□□□□□ -0.37
CRAMP1-203ENST00000415022 ELP3Q9H9T3 547 aa12.71□□□□□ -0.37
CRAMP1-203ENST00000415022 PLCG2P16885 1265 aa12.7□□□□□ -0.38
CRAMP1-203ENST00000415022 MKRN3Q13064 507 aaKnown RBP12.7□□□□□ -0.38
CRAMP1-203ENST00000415022 GRM1Q13255 1194 aa12.7□□□□□ -0.38
CRAMP1-203ENST00000415022 TTLL12Q14166 644 aaPredicted RBP12.7□□□□□ -0.38
CRAMP1-203ENST00000415022 CTR9Q6PD62 1173 aa12.7□□□□□ -0.38
CRAMP1-203ENST00000415022 TMED8Q6PL24 325 aaPredicted RBP12.7□□□□□ -0.38
CRAMP1-203ENST00000415022 PAXIP1Q6ZW49 1069 aaPredicted RBP12.7□□□□□ -0.38
CRAMP1-203ENST00000415022 RILPL2Q969X0 211 aa12.7□□□□□ -0.38
CRAMP1-203ENST00000415022 WRNIP1Q96S55 665 aa12.7□□□□□ -0.38
CRAMP1-203ENST00000415022 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.7□□□□□ -0.38
CRAMP1-203ENST00000415022 TRIM6-TRIM34B2RNG4 842 aa12.69□□□□□ -0.38
CRAMP1-203ENST00000415022 NEFLP07196 543 aa12.69□□□□□ -0.38
CRAMP1-203ENST00000415022 SHMT1P34896 483 aa12.69□□□□□ -0.38
CRAMP1-203ENST00000415022 ZNF157P51786 506 aaPredicted RBP12.69□□□□□ -0.38
CRAMP1-203ENST00000415022 WNK4Q96J92 1243 aa12.69□□□□□ -0.38
CRAMP1-203ENST00000415022 ZBTB47Q9UFB7 747 aaPredicted RBP12.69□□□□□ -0.38
CRAMP1-203ENST00000415022 SLC4A4Q9Y6R1 1079 aa12.69□□□□□ -0.38
CRAMP1-203ENST00000415022 LOC285556D6RIA3 1793 aa12.69□□□□□ -0.38
CRAMP1-203ENST00000415022 ZSWIM8A7E2V4 1837 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 USP17L12C9JPN9 530 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 USP17L21D6R901 530 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 TBC1D12O60347 775 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 ZFYP08048 801 aaPredicted RBP12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 USP5P45974 858 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 MAP3K9P80192 1104 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 MOGSQ13724 837 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 ERICH6BQ5W0A0 696 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 SPRYD7Q5W111 196 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 ARMC9Q7Z3E5 817 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 ZSCAN29Q8IWY8 852 aaPredicted RBP12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 MS4A4AQ96JQ5 239 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 NOL10Q9BSC4 688 aaKnown RBP12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 ZNF341Q9BYN7 854 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 CRNKL1Q9BZJ0 848 aaKnown RBP12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 NBPF3Q9H094 633 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 INCENPQ9NQS7 918 aa12.68□□□□□ -0.38
CRAMP1-203ENST00000415022 CASP8AP2Q9UKL3 1982 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 PPP1R12BO60237 982 aaPredicted RBP12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 CHMLP26374 656 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 GUCY1A2P33402 732 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 NF2P35240 595 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 IREB2P48200 963 aaKnown RBP12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 KIF23Q02241 960 aaPredicted RBP12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 NOL9Q5SY16 702 aaKnown RBP12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 C12orf60Q5U649 245 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 ZSCAN25Q6NSZ9 544 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 TATDN1Q6P1N9 297 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 ANKRD13AQ8IZ07 590 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 IFNL3Q8IZI9 196 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 PTPN18Q99952 460 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 R3HDMLQ9H3Y0 253 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 MCM9Q9NXL9 1143 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 PI4KBQ9UBF8 816 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 PARP14Q460N5 1801 aa12.67□□□□□ -0.38
CRAMP1-203ENST00000415022 RLFQ13129 1914 aa12.66□□□□□ -0.38
CRAMP1-203ENST00000415022 SPDYE5A6NIY4 337 aa12.66□□□□□ -0.38
CRAMP1-203ENST00000415022 GDF11O95390 407 aa12.66□□□□□ -0.38
CRAMP1-203ENST00000415022 CWC27Q6UX04 472 aaKnown RBP12.66□□□□□ -0.38
CRAMP1-203ENST00000415022 CLEC10AQ8IUN9 316 aa12.66□□□□□ -0.38
CRAMP1-203ENST00000415022 OPTNQ96CV9 577 aa12.66□□□□□ -0.38
CRAMP1-203ENST00000415022 EHD4Q9H223 541 aa12.66□□□□□ -0.38
CRAMP1-203ENST00000415022 DHX36Q9H2U1 1008 aaKnown RBP12.66□□□□□ -0.38
CRAMP1-203ENST00000415022 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.66□□□□□ -0.384e-9■■■■■ 45.4
CRAMP1-203ENST00000415022 HELLSQ9NRZ9 838 aa12.66□□□□□ -0.38
CRAMP1-203ENST00000415022 TAF6LQ9Y6J9 622 aa12.66□□□□□ -0.38
CRAMP1-203ENST00000415022 MYH4Q9Y623 1939 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms