RNA–Protein interactions for RNA: ENST00000414543.5

TRIM27-203, Transcript of tripartite motif containing 27, humanhuman

TSL 3

Gene TRIM27, Length 1,813 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-203ENST00000414543 APOA5Q6Q788 366 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 NSUN7Q8NE18 718 aaKnown RBP12.04□□□□□ -0.48
TRIM27-203ENST00000414543 USP40Q9NVE5 1235 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 SAP30BPQ9UHR5 308 aaKnown RBP12.04□□□□□ -0.48
TRIM27-203ENST00000414543 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRIM27-203ENST00000414543 SLC12A7Q9Y666 1083 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 FLT1P17948 1338 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 SCN9AQ15858 1988 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 VPS37CA5D8V6 355 aaPredicted RBP12.04□□□□□ -0.48
TRIM27-203ENST00000414543 YDJCA8MPS7 323 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 ZBTB43O43298 467 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 JAK2O60674 1132 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 PTMSP20962 102 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 NT5C2P49902 561 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 METAP2P50579 478 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRIM27-203ENST00000414543 RBM5P52756 815 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRIM27-203ENST00000414543 NIM1KQ8IY84 436 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 SMARCC2Q8TAQ2 1214 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 DDX11Q96FC9 970 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 MKNK2Q9HBH9 465 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 ZNF287Q9HBT7 754 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 HPS5Q9UPZ3 1129 aa12.04□□□□□ -0.48
TRIM27-203ENST00000414543 PTPDC1A2A3K4 754 aa12.03□□□□□ -0.48
TRIM27-203ENST00000414543 EVX2Q03828 476 aa12.03□□□□□ -0.48
TRIM27-203ENST00000414543 CPLX2Q6PUV4 134 aaKnown RBP12.03□□□□□ -0.48
TRIM27-203ENST00000414543 RAB11FIP4Q86YS3 637 aa12.03□□□□□ -0.48
TRIM27-203ENST00000414543 ZDHHC15Q96MV8 337 aa12.03□□□□□ -0.48
TRIM27-203ENST00000414543 ZSCAN10Q96SZ4 725 aaPredicted RBP12.03□□□□□ -0.48
TRIM27-203ENST00000414543 SENP2Q9HC62 589 aa12.03□□□□□ -0.48
TRIM27-203ENST00000414543 BCS1LQ9Y276 419 aa12.03□□□□□ -0.48
TRIM27-203ENST00000414543 CDK5RAP2Q96SN8 1893 aa12.03□□□□□ -0.48
TRIM27-203ENST00000414543 TNKSO95271 1327 aa12.03□□□□□ -0.48
TRIM27-203ENST00000414543 MYO3BQ8WXR4 1341 aa12.03□□□□□ -0.48
TRIM27-203ENST00000414543 ROBO3Q96MS0 1386 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 TSPY2A6NKD2 308 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 GOLGA8AA7E2F4 631 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 CTDNEP1O95476 244 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 IARSP41252 1262 aaKnown RBP12.02□□□□□ -0.48
TRIM27-203ENST00000414543 PLCD1P51178 756 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 PICALMQ13492 652 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 MCTP1Q6DN14 999 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 APOBEC3HQ6NTF7 200 aaKnown RBP12.02□□□□□ -0.48
TRIM27-203ENST00000414543 CDC42EP5Q6NZY7 148 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 MICU3Q86XE3 530 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 DYNLL2Q96FJ2 89 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 TAOK3Q9H2K8 898 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 SERPINA10Q9UK55 444 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 ATP6V1DQ9Y5K8 247 aa12.02□□□□□ -0.48
TRIM27-203ENST00000414543 RAD17O75943 681 aa12.02□□□□□ -0.49
TRIM27-203ENST00000414543 CDKL5O76039 1030 aa12.02□□□□□ -0.49
TRIM27-203ENST00000414543 F13A1P00488 732 aa12.02□□□□□ -0.49
TRIM27-203ENST00000414543 SEC23AQ15436 765 aa12.02□□□□□ -0.49
TRIM27-203ENST00000414543 FAM47AQ5JRC9 791 aa12.02□□□□□ -0.49
TRIM27-203ENST00000414543 RSBN1LQ6PCB5 846 aaPredicted RBP12.02□□□□□ -0.49
TRIM27-203ENST00000414543 TTC6Q86TZ1 520 aa12.02□□□□□ -0.49
TRIM27-203ENST00000414543 ZNF444Q8N0Y2 327 aaPredicted RBP12.02□□□□□ -0.49
TRIM27-203ENST00000414543 SPON1Q9HCB6 807 aa12.02□□□□□ -0.49
TRIM27-203ENST00000414543 ZNRF3Q9ULT6 936 aa12.02□□□□□ -0.49
TRIM27-203ENST00000414543 MTMR6Q9Y217 621 aa12.02□□□□□ -0.49
TRIM27-203ENST00000414543 BRCA1P38398 1863 aaKnown RBP12.01□□□□□ -0.49
TRIM27-203ENST00000414543 ZNF646O15015 1829 aaPredicted RBP12.01□□□□□ -0.49
TRIM27-203ENST00000414543 H3BQV1 296 aa12.01□□□□□ -0.49
TRIM27-203ENST00000414543 WDHD1O75717 1129 aaPredicted RBP12.01□□□□□ -0.49
TRIM27-203ENST00000414543 VIL1P09327 827 aaKnown RBP12.01□□□□□ -0.49
TRIM27-203ENST00000414543 IFIT1BQ5T764 474 aaKnown RBP12.01□□□□□ -0.49
TRIM27-203ENST00000414543 IFFO2Q5TF58 517 aa12.01□□□□□ -0.49
TRIM27-203ENST00000414543 ENAHQ8N8S7 591 aaPredicted RBP12.01□□□□□ -0.49
TRIM27-203ENST00000414543 JDP2Q8WYK2 163 aa12.01□□□□□ -0.49
TRIM27-203ENST00000414543 MYH1P12882 1939 aa12.01□□□□□ -0.49
TRIM27-203ENST00000414543 FOCADQ5VW36 1801 aa12.01□□□□□ -0.49
TRIM27-203ENST00000414543 PSMD14O00487 310 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 RXRAP19793 462 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 ADD1P35611 737 aaKnown RBP12□□□□□ -0.49
TRIM27-203ENST00000414543 RCAN1P53805 252 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 TFAP4Q01664 338 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 CCDC178Q5BJE1 867 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 C16orf86Q6ZW13 317 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 MYL10Q9BUA6 226 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 HDAC9Q9UKV0 1011 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 PSME4Q14997 1843 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 ADAMTSL1Q8N6G6 1762 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 CCDC196A0A1B0GTZ2 297 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 TSPY3P0CV98 308 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 TSPY8P0CW00 308 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 CDK8P49336 464 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 CATIPQ7Z7H3 387 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 CCDC144CPQ8IYA2 1237 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 OGFOD1Q8N543 542 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 NUP133Q8WUM0 1156 aa12□□□□□ -0.49
TRIM27-203ENST00000414543 DDX4Q9NQI0 724 aaKnown RBP12□□□□□ -0.49
TRIM27-203ENST00000414543 ORC3Q9UBD5 711 aaPredicted RBP12□□□□□ -0.49
TRIM27-203ENST00000414543 FER1L6Q2WGJ9 1857 aa11.99□□□□□ -0.49
TRIM27-203ENST00000414543 DDX60LQ5H9U9 1706 aaKnown RBP11.99□□□□□ -0.49
TRIM27-203ENST00000414543 NFKBIEO00221 500 aa11.99□□□□□ -0.49
TRIM27-203ENST00000414543 PPFIA3O75145 1194 aa11.99□□□□□ -0.49
TRIM27-203ENST00000414543 HLA-DOAP06340 250 aa11.99□□□□□ -0.49
TRIM27-203ENST00000414543 CALM1P0DP23 149 aa11.99□□□□□ -0.49
TRIM27-203ENST00000414543 CALM2P0DP24 149 aa11.99□□□□□ -0.49
TRIM27-203ENST00000414543 CALM3P0DP25 149 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms