RNA–Protein interactions for RNA: ENST00000414218.1

LMBR1-203, Transcript of limb development membrane protein 1, humanhuman

TSL 5

Gene LMBR1, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-203ENST00000414218 SLC9C1Q4G0N8 1177 aa25.18■■□□□ 1.62
LMBR1-203ENST00000414218 HSP90AB4PQ58FF6 505 aa25.18■■□□□ 1.62
LMBR1-203ENST00000414218 MAPKAPK5Q8IW41 473 aa25.18■■□□□ 1.62
LMBR1-203ENST00000414218 IL1RAPL2Q9NP60 686 aa25.18■■□□□ 1.62
LMBR1-203ENST00000414218 DDX19BQ9UMR2 479 aa25.18■■□□□ 1.62
LMBR1-203ENST00000414218 IDH1O75874 414 aaKnown RBP25.17■■□□□ 1.62
LMBR1-203ENST00000414218 CTGFP29279 349 aa25.17■■□□□ 1.62
LMBR1-203ENST00000414218 PSMC4P43686 418 aa25.17■■□□□ 1.62
LMBR1-203ENST00000414218 RRP1BQ14684 758 aaKnown RBP25.17■■□□□ 1.62
LMBR1-203ENST00000414218 RHPN1Q8TCX5 695 aa25.17■■□□□ 1.62
LMBR1-203ENST00000414218 ZBTB40Q9NUA8 1239 aa25.17■■□□□ 1.62
LMBR1-203ENST00000414218 PI4KBQ9UBF8 816 aa25.17■■□□□ 1.62
LMBR1-203ENST00000414218 APBB1O00213 710 aa25.16■■□□□ 1.62
LMBR1-203ENST00000414218 IGSF3O75054 1194 aa25.16■■□□□ 1.62
LMBR1-203ENST00000414218 GNRH1P01148 92 aa25.16■■□□□ 1.62
LMBR1-203ENST00000414218 DYNLL1P63167 89 aaKnown RBP25.16■■□□□ 1.62
LMBR1-203ENST00000414218 PDE4DIPQ5VU43 2346 aa25.16■■□□□ 1.62
LMBR1-203ENST00000414218 NBPF11Q86T75 865 aa25.16■■□□□ 1.62
LMBR1-203ENST00000414218 RPAP2Q8IXW5 612 aaPredicted RBP25.16■■□□□ 1.62
LMBR1-203ENST00000414218 ZNF333Q96JL9 665 aa25.16■■□□□ 1.62
LMBR1-203ENST00000414218 TRIM47Q96LD4 638 aa25.16■■□□□ 1.62
LMBR1-203ENST00000414218 DHX36Q9H2U1 1008 aaKnown RBP25.16■■□□□ 1.62
LMBR1-203ENST00000414218 HERC5Q9UII4 1024 aaKnown RBP25.16■■□□□ 1.62
LMBR1-203ENST00000414218 ATAD5Q96QE3 1844 aa25.16■■□□□ 1.62
LMBR1-203ENST00000414218 FLT1P17948 1338 aa25.15■■□□□ 1.62
LMBR1-203ENST00000414218 CAP2P40123 477 aa25.15■■□□□ 1.62
LMBR1-203ENST00000414218 SIRT2Q8IXJ6 389 aa25.15■■□□□ 1.62
LMBR1-203ENST00000414218 ANTXR1Q9H6X2 564 aa25.15■■□□□ 1.62
LMBR1-203ENST00000414218 SIPA1L1O43166 1804 aa25.14■■□□□ 1.62
LMBR1-203ENST00000414218 FOCADQ5VW36 1801 aa25.14■■□□□ 1.62
LMBR1-203ENST00000414218 FMNL1O95466 1100 aaPredicted RBP25.14■■□□□ 1.62
LMBR1-203ENST00000414218 SAP30BPQ9UHR5 308 aaKnown RBP25.14■■□□□ 1.62
LMBR1-203ENST00000414218 PALD1Q9ULE6 856 aa25.14■■□□□ 1.62
LMBR1-203ENST00000414218 SLC45A1Q9Y2W3 748 aa25.14■■□□□ 1.62
LMBR1-203ENST00000414218 CENPFP49454 3210 aa25.14■■□□□ 1.61
LMBR1-203ENST00000414218 HMMRO75330 724 aa25.13■■□□□ 1.61
LMBR1-203ENST00000414218 BCRP11274 1271 aa25.13■■□□□ 1.61
LMBR1-203ENST00000414218 PRMT2P55345 433 aa25.13■■□□□ 1.61
LMBR1-203ENST00000414218 SPP2Q13103 211 aa25.13■■□□□ 1.61
LMBR1-203ENST00000414218 MAGEB6Q8N7X4 407 aa25.13■■□□□ 1.61
LMBR1-203ENST00000414218 MIGA1Q8NAN2 632 aa25.13■■□□□ 1.61
LMBR1-203ENST00000414218 SH3TC2Q8TF17 1288 aa25.13■■□□□ 1.61
LMBR1-203ENST00000414218 RBBP6Q7Z6E9 1792 aaKnown RBP25.13■■□□□ 1.61
LMBR1-203ENST00000414218 EN2P19622 333 aaPredicted RBP25.12■■□□□ 1.61
LMBR1-203ENST00000414218 OSBPP22059 807 aa25.12■■□□□ 1.61
LMBR1-203ENST00000414218 ZNF280CQ8ND82 737 aa25.12■■□□□ 1.61
LMBR1-203ENST00000414218 KIF1BPQ96EK5 621 aa25.12■■□□□ 1.61
LMBR1-203ENST00000414218 TMEM106CQ9BVX2 250 aa25.12■■□□□ 1.61
LMBR1-203ENST00000414218 BCL11AQ9H165 835 aa25.12■■□□□ 1.61
LMBR1-203ENST00000414218 SRRDQ9UH36 339 aa25.12■■□□□ 1.61
LMBR1-203ENST00000414218 AGTPBP1Q9UPW5 1226 aa25.12■■□□□ 1.61
LMBR1-203ENST00000414218 KIAA0100Q14667 2235 aaKnown RBP25.12■■□□□ 1.61
LMBR1-203ENST00000414218 USP17L5A8MUK1 530 aa25.11■■□□□ 1.61
LMBR1-203ENST00000414218 MYCP01106 439 aaPredicted RBP25.11■■□□□ 1.61
LMBR1-203ENST00000414218 HOXD10P28358 340 aa25.11■■□□□ 1.61
LMBR1-203ENST00000414218 MAP3K12Q12852 859 aa25.11■■□□□ 1.61
LMBR1-203ENST00000414218 TREML2Q5T2D2 321 aa25.11■■□□□ 1.61
LMBR1-203ENST00000414218 FOXP4Q8IVH2 680 aaPredicted RBP25.11■■□□□ 1.61
LMBR1-203ENST00000414218 CLASRPQ8N2M8 674 aaKnown RBP25.11■■□□□ 1.61
LMBR1-203ENST00000414218 C20orf194Q5TEA3 1177 aa25.1■■□□□ 1.61
LMBR1-203ENST00000414218 METTL16Q86W50 562 aaKnown RBP25.1■■□□□ 1.61
LMBR1-203ENST00000414218 CRACR2BQ8N4Y2 399 aaPredicted RBP25.1■■□□□ 1.61
LMBR1-203ENST00000414218 TRIM34Q9BYJ4 488 aa25.1■■□□□ 1.61
LMBR1-203ENST00000414218 TBC1D2Q9BYX2 928 aa25.1■■□□□ 1.61
LMBR1-203ENST00000414218 CHMP4BQ9H444 224 aaKnown RBP25.1■■□□□ 1.61
LMBR1-203ENST00000414218 DNAJC18Q9H819 358 aa25.1■■□□□ 1.61
LMBR1-203ENST00000414218 MGAMO43451 1857 aa25.09■■□□□ 1.61
LMBR1-203ENST00000414218 SLC4A8Q2Y0W8 1093 aa25.09■■□□□ 1.61
LMBR1-203ENST00000414218 PROCA1Q8NCQ7 364 aaPredicted RBP25.09■■□□□ 1.61
LMBR1-203ENST00000414218 SMCR8Q8TEV9 937 aaPredicted RBP25.09■■□□□ 1.61
LMBR1-203ENST00000414218 RAB11FIP3O75154 756 aa25.08■■□□□ 1.61
LMBR1-203ENST00000414218 IFIT2P09913 472 aaKnown RBP25.08■■□□□ 1.61
LMBR1-203ENST00000414218 USP5P45974 858 aa25.08■■□□□ 1.61
LMBR1-203ENST00000414218 HMGCS2P54868 508 aa25.08■■□□□ 1.61
LMBR1-203ENST00000414218 FCGRTP55899 365 aa25.08■■□□□ 1.61
LMBR1-203ENST00000414218 JAG1P78504 1218 aa25.08■■□□□ 1.61
LMBR1-203ENST00000414218 RAET1EQ8TD07 263 aa25.08■■□□□ 1.61
LMBR1-203ENST00000414218 MYPNQ86TC9 1320 aa25.08■■□□□ 1.6
LMBR1-203ENST00000414218 MYH1P12882 1939 aa25.08■■□□□ 1.6
LMBR1-203ENST00000414218 HLA-DOAP06340 250 aa25.07■■□□□ 1.6
LMBR1-203ENST00000414218 SHROOM1Q2M3G4 852 aaPredicted RBP25.07■■□□□ 1.6
LMBR1-203ENST00000414218 CERS3Q8IU89 383 aa25.07■■□□□ 1.6
LMBR1-203ENST00000414218 AS3MTQ9HBK9 375 aa25.07■■□□□ 1.6
LMBR1-203ENST00000414218 LOC285556D6RIA3 1793 aa25.06■■□□□ 1.6
LMBR1-203ENST00000414218 ASNSP08243 561 aa25.06■■□□□ 1.6
LMBR1-203ENST00000414218 PDE3AQ14432 1141 aa25.06■■□□□ 1.6
LMBR1-203ENST00000414218 TTF1Q15361 905 aaPredicted RBP25.06■■□□□ 1.6
LMBR1-203ENST00000414218 WDR18Q9BV38 432 aa25.06■■□□□ 1.6
LMBR1-203ENST00000414218 PNMA3Q9UL41 463 aa25.06■■□□□ 1.6
LMBR1-203ENST00000414218 GDF11O95390 407 aa25.05■■□□□ 1.6
LMBR1-203ENST00000414218 PRKCZQ05513 592 aa25.05■■□□□ 1.6
LMBR1-203ENST00000414218 SH3D19Q5HYK7 790 aa25.05■■□□□ 1.6
LMBR1-203ENST00000414218 PRPF38BQ5VTL8 546 aaKnown RBP25.05■■□□□ 1.6
LMBR1-203ENST00000414218 TMED8Q6PL24 325 aaPredicted RBP25.05■■□□□ 1.6
LMBR1-203ENST00000414218 ANKRD13CQ8N6S4 541 aa25.05■■□□□ 1.6
LMBR1-203ENST00000414218 DNAJC2Q99543 621 aaKnown RBP25.05■■□□□ 1.6
LMBR1-203ENST00000414218 GABRQQ9UN88 632 aa25.05■■□□□ 1.6
LMBR1-203ENST00000414218 GOLIM4O00461 696 aa25.04■■□□□ 1.6
LMBR1-203ENST00000414218 GRK4P32298 578 aa25.04■■□□□ 1.6
LMBR1-203ENST00000414218 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.04■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms