RNA–Protein interactions for RNA: ENST00000413593.5

TMEM248-202, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-202ENST00000413593 SCYL3Q8IZE3 742 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 LCORLQ8N3X6 602 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 KBTBD3Q8NAB2 608 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 MS4A4AQ96JQ5 239 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 LNPKQ9C0E8 428 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 PI4KBQ9UBF8 816 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 STAP2Q9UGK3 403 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 HERC5Q9UII4 1024 aaKnown RBP12.18□□□□□ -0.46
TMEM248-202ENST00000413593 PALD1Q9ULE6 856 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 OTOFQ9HC10 1997 aa12.18□□□□□ -0.46
TMEM248-202ENST00000413593 TESPA1A2RU30 521 aaPredicted RBP12.17□□□□□ -0.46
TMEM248-202ENST00000413593 IRF6O14896 467 aa12.17□□□□□ -0.46
TMEM248-202ENST00000413593 MBD4O95243 580 aa12.17□□□□□ -0.46
TMEM248-202ENST00000413593 GTF2A2P52657 109 aa12.17□□□□□ -0.46
TMEM248-202ENST00000413593 PDE1AP54750 535 aa12.17□□□□□ -0.46
TMEM248-202ENST00000413593 NUCB1Q02818 461 aa12.17□□□□□ -0.46
TMEM248-202ENST00000413593 PPATQ06203 517 aa12.17□□□□□ -0.46
TMEM248-202ENST00000413593 PPIL2Q13356 520 aa12.17□□□□□ -0.46
TMEM248-202ENST00000413593 B4GALNT3Q6L9W6 998 aa12.17□□□□□ -0.46
TMEM248-202ENST00000413593 IFNL1Q8IU54 200 aa12.17□□□□□ -0.46
TMEM248-202ENST00000413593 CRNKL1Q9BZJ0 848 aaKnown RBP12.17□□□□□ -0.46
TMEM248-202ENST00000413593 ARMT1Q9H993 441 aa12.17□□□□□ -0.46
TMEM248-202ENST00000413593 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.17□□□□□ -0.46
TMEM248-202ENST00000413593 SAP30BPQ9UHR5 308 aaKnown RBP12.17□□□□□ -0.46
TMEM248-202ENST00000413593 MYO5AQ9Y4I1 1855 aaKnown RBP12.17□□□□□ -0.46
TMEM248-202ENST00000413593 IGF2BP3O00425 579 aaKnown RBP eCLIP12.16□□□□□ -0.46
TMEM248-202ENST00000413593 CTNND1O60716 968 aaKnown RBP12.16□□□□□ -0.46
TMEM248-202ENST00000413593 HLA-DOAP06340 250 aa12.16□□□□□ -0.46
TMEM248-202ENST00000413593 METTL16Q86W50 562 aaKnown RBP12.16□□□□□ -0.46
TMEM248-202ENST00000413593 CHD1LQ86WJ1 897 aa12.16□□□□□ -0.46
TMEM248-202ENST00000413593 FOXP4Q8IVH2 680 aaPredicted RBP12.16□□□□□ -0.46
TMEM248-202ENST00000413593 BRI3BPQ8WY22 251 aa12.16□□□□□ -0.46
TMEM248-202ENST00000413593 PTPN18Q99952 460 aa12.16□□□□□ -0.46
TMEM248-202ENST00000413593 DNAJC18Q9H819 358 aa12.16□□□□□ -0.46
TMEM248-202ENST00000413593 CCL15-CCL14A0A0B4J2E2 113 aa12.15□□□□□ -0.46
TMEM248-202ENST00000413593 RNF113AO15541 343 aaKnown RBP12.15□□□□□ -0.46
TMEM248-202ENST00000413593 ALDH1A1P00352 501 aa12.15□□□□□ -0.46
TMEM248-202ENST00000413593 CETPP11597 493 aa12.15□□□□□ -0.46
TMEM248-202ENST00000413593 PTPRAP18433 802 aa12.15□□□□□ -0.46
TMEM248-202ENST00000413593 RRP1BQ14684 758 aaKnown RBP12.15□□□□□ -0.46
TMEM248-202ENST00000413593 CCL15Q16663 113 aa12.15□□□□□ -0.46
TMEM248-202ENST00000413593 SLC4A8Q2Y0W8 1093 aa12.15□□□□□ -0.46
TMEM248-202ENST00000413593 CRACR2BQ8N4Y2 399 aaPredicted RBP12.15□□□□□ -0.46
TMEM248-202ENST00000413593 SDR42E1Q8WUS8 393 aa12.15□□□□□ -0.46
TMEM248-202ENST00000413593 CFHR5Q9BXR6 569 aa12.15□□□□□ -0.46
TMEM248-202ENST00000413593 PUS7LQ9H0K6 701 aaKnown RBP12.15□□□□□ -0.46
TMEM248-202ENST00000413593 DCP1AQ9NPI6 582 aaPredicted RBP12.15□□□□□ -0.46
TMEM248-202ENST00000413593 PICK1Q9NRD5 415 aa12.15□□□□□ -0.46
TMEM248-202ENST00000413593 KCNH4Q9UQ05 1017 aa12.15□□□□□ -0.46
TMEM248-202ENST00000413593 PRKAB2O43741 272 aa12.14□□□□□ -0.47
TMEM248-202ENST00000413593 TBC1D8O95759 1140 aa12.14□□□□□ -0.47
TMEM248-202ENST00000413593 ZFYP08048 801 aaPredicted RBP12.14□□□□□ -0.47
TMEM248-202ENST00000413593 CAP2P40123 477 aa12.14□□□□□ -0.47
TMEM248-202ENST00000413593 SNAPC2Q13487 334 aa12.14□□□□□ -0.47
TMEM248-202ENST00000413593 LRRFIP1Q32MZ4 808 aaKnown RBP12.14□□□□□ -0.47
TMEM248-202ENST00000413593 OTUD7BQ6GQQ9 843 aa12.14□□□□□ -0.47
TMEM248-202ENST00000413593 TTC6Q86TZ1 520 aa12.14□□□□□ -0.47
TMEM248-202ENST00000413593 APPBP2Q92624 585 aa12.14□□□□□ -0.47
TMEM248-202ENST00000413593 FSD1Q9BTV5 496 aa12.14□□□□□ -0.47
TMEM248-202ENST00000413593 EHD4Q9H223 541 aa12.14□□□□□ -0.47
TMEM248-202ENST00000413593 MCM9Q9NXL9 1143 aa12.14□□□□□ -0.47
TMEM248-202ENST00000413593 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.14□□□□□ -0.47
TMEM248-202ENST00000413593 ZHX2Q9Y6X8 837 aa12.14□□□□□ -0.47
TMEM248-202ENST00000413593 CCDC84Q86UT8 332 aaPredicted RBP12.13□□□□□ -0.47
TMEM248-202ENST00000413593 FAM43AQ8N2R8 423 aa12.13□□□□□ -0.47
TMEM248-202ENST00000413593 OSBP2Q969R2 916 aa12.13□□□□□ -0.47
TMEM248-202ENST00000413593 STRBPQ96SI9 672 aaKnown RBP12.13□□□□□ -0.47
TMEM248-202ENST00000413593 TRIM34Q9BYJ4 488 aa12.13□□□□□ -0.47
TMEM248-202ENST00000413593 R3HDMLQ9H3Y0 253 aa12.13□□□□□ -0.47
TMEM248-202ENST00000413593 ATP8A2Q9NTI2 1148 aa12.13□□□□□ -0.47
TMEM248-202ENST00000413593 SERPINB13Q9UIV8 391 aa12.13□□□□□ -0.47
TMEM248-202ENST00000413593 CXCL11O14625 94 aa12.12□□□□□ -0.47
TMEM248-202ENST00000413593 POLR3DP05423 398 aaPredicted RBP12.12□□□□□ -0.47
TMEM248-202ENST00000413593 PLCD1P51178 756 aa12.12□□□□□ -0.47
TMEM248-202ENST00000413593 JAG1P78504 1218 aa12.12□□□□□ -0.47
TMEM248-202ENST00000413593 NOM1Q5C9Z4 860 aaKnown RBP12.12□□□□□ -0.47
TMEM248-202ENST00000413593 PLEKHM2Q8IWE5 1019 aa12.12□□□□□ -0.47
TMEM248-202ENST00000413593 EVI5LQ96CN4 794 aa12.12□□□□□ -0.47
TMEM248-202ENST00000413593 OSBPL3Q9H4L5 887 aa12.12□□□□□ -0.47
TMEM248-202ENST00000413593 AFG3L2Q9Y4W6 797 aa12.12□□□□□ -0.47
TMEM248-202ENST00000413593 SLC4A4Q9Y6R1 1079 aa12.12□□□□□ -0.47
TMEM248-202ENST00000413593 BTBD19C9JJ37 291 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 M0R2C6 588 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 GPR25O00155 361 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 GDF11O95390 407 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 CYP2D6P10635 497 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 EVX2Q03828 476 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 GABPAQ06546 454 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 CRHR2Q13324 411 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 MOGSQ13724 837 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 ZMYM1Q5SVZ6 1142 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 TATDN1Q6P1N9 297 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 TNS4Q8IZW8 715 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 ZCCHC17Q9NP64 241 aaKnown RBP12.11□□□□□ -0.47
TMEM248-202ENST00000413593 SIPA1L1O43166 1804 aa12.11□□□□□ -0.47
TMEM248-202ENST00000413593 LAMB1P07942 1786 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 AK9Q5TCS8 1911 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 FOCADQ5VW36 1801 aa12.1□□□□□ -0.47
TMEM248-202ENST00000413593 A0A0G2JLL6 359 aaPredicted RBP12.1□□□□□ -0.47
TMEM248-202ENST00000413593 TRIM75PA6NK02 468 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms