RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 PI4KBQ9UBF8 816 aa12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 CPA4Q9UI42 421 aa12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 KCNH4Q9UQ05 1017 aa12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 AFG3L2Q9Y4W6 797 aa12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 MYH13Q9UKX3 1938 aa12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 ZNF532Q9HCE3 1301 aa12.36□□□□□ -0.43
NCKIPSD-202ENST00000413374 MAGEB6P1A0A0J9YX57 407 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 CXCL11O14625 94 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 GDF11O95390 407 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 PDE6AP16499 860 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 ATP5JP18859 108 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 SOX10P56693 466 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 JAG1P78504 1218 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 SPP2Q13103 211 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 PKN2Q16513 984 aaKnown RBP12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 GPAT2Q6NUI2 795 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 OTOP1Q7RTM1 612 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 ANKRD23Q86SG2 305 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 FOXP4Q8IVH2 680 aaPredicted RBP12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 ERO1AQ96HE7 468 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 DHX36Q9H2U1 1008 aaKnown RBP12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 EFCC1Q9HA90 598 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 PAG1Q9NWQ8 432 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 MYH2Q9UKX2 1941 aa12.35□□□□□ -0.43
NCKIPSD-202ENST00000413374 TLR2O60603 784 aa12.34□□□□□ -0.43
NCKIPSD-202ENST00000413374 CYP2C8P10632 490 aa12.34□□□□□ -0.43
NCKIPSD-202ENST00000413374 CAP2P40123 477 aa12.34□□□□□ -0.43
NCKIPSD-202ENST00000413374 SHROOM1Q2M3G4 852 aaPredicted RBP12.34□□□□□ -0.43
NCKIPSD-202ENST00000413374 HAUS7Q99871 368 aa12.34□□□□□ -0.43
NCKIPSD-202ENST00000413374 ARHGAP39Q9C0H5 1083 aa12.34□□□□□ -0.43
NCKIPSD-202ENST00000413374 ARMT1Q9H993 441 aa12.34□□□□□ -0.43
NCKIPSD-202ENST00000413374 AKAP11Q9UKA4 1901 aa12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 A0A0G2JLL6 359 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 TCRBV5S4A2TA0A5A2 114 aa12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 PRKAB2O43741 272 aa12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 IGSF3O75054 1194 aa12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 POLR3DP05423 398 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 HLA-DOAP06340 250 aa12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 EVX2Q03828 476 aa12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 FBXO46Q6PJ61 603 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 FASTKD5Q7L8L6 764 aaKnown RBP12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 PRRT2Q7Z6L0 340 aaPredicted RBP12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 LCORLQ8N3X6 602 aa12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 RIOK1Q9BRS2 568 aaKnown RBP12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 DNAJC18Q9H819 358 aa12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 ECHDC1Q9NTX5 307 aa12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 HERC5Q9UII4 1024 aaKnown RBP12.33□□□□□ -0.44
NCKIPSD-202ENST00000413374 USP17L5A8MUK1 530 aa12.32□□□□□ -0.44
NCKIPSD-202ENST00000413374 ADD2P35612 726 aa12.32□□□□□ -0.44
NCKIPSD-202ENST00000413374 PLCD1P51178 756 aa12.32□□□□□ -0.44
NCKIPSD-202ENST00000413374 C17orf99Q6UX52 265 aa12.32□□□□□ -0.44
NCKIPSD-202ENST00000413374 ZNF280CQ8ND82 737 aa12.32□□□□□ -0.44
NCKIPSD-202ENST00000413374 OTUD7AQ8TE49 926 aaPredicted RBP12.32□□□□□ -0.44
NCKIPSD-202ENST00000413374 SDR42E1Q8WUS8 393 aa12.32□□□□□ -0.44
NCKIPSD-202ENST00000413374 PTPN22Q9Y2R2 807 aa12.32□□□□□ -0.44
NCKIPSD-202ENST00000413374 OTOFQ9HC10 1997 aa12.32□□□□□ -0.44
NCKIPSD-202ENST00000413374 MBD4O95243 580 aa12.31□□□□□ -0.44
NCKIPSD-202ENST00000413374 CYP2D6P10635 497 aa12.31□□□□□ -0.44
NCKIPSD-202ENST00000413374 HMGCS2P54868 508 aa12.31□□□□□ -0.44
NCKIPSD-202ENST00000413374 KIF22Q14807 665 aa12.31□□□□□ -0.44
NCKIPSD-202ENST00000413374 TREML2Q5T2D2 321 aa12.31□□□□□ -0.44
NCKIPSD-202ENST00000413374 ANKRD45Q5TZF3 282 aa12.31□□□□□ -0.44
NCKIPSD-202ENST00000413374 TTC6Q86TZ1 520 aa12.31□□□□□ -0.44
NCKIPSD-202ENST00000413374 CRNKL1Q9BZJ0 848 aaKnown RBP12.31□□□□□ -0.44
NCKIPSD-202ENST00000413374 ZCCHC17Q9NP64 241 aaKnown RBP12.31□□□□□ -0.44
NCKIPSD-202ENST00000413374 MCM9Q9NXL9 1143 aa12.31□□□□□ -0.44
NCKIPSD-202ENST00000413374 AK9Q5TCS8 1911 aa12.31□□□□□ -0.44
NCKIPSD-202ENST00000413374 FMNL1O95466 1100 aaPredicted RBP12.3□□□□□ -0.44
NCKIPSD-202ENST00000413374 MYCP01106 439 aaPredicted RBP12.3□□□□□ -0.44
NCKIPSD-202ENST00000413374 GH2P01242 217 aa12.3□□□□□ -0.44
NCKIPSD-202ENST00000413374 CTGFP29279 349 aa12.3□□□□□ -0.44
NCKIPSD-202ENST00000413374 METTL16Q86W50 562 aaKnown RBP12.3□□□□□ -0.44
NCKIPSD-202ENST00000413374 CERS3Q8IU89 383 aa12.3□□□□□ -0.44
NCKIPSD-202ENST00000413374 GPATCH3Q96I76 525 aa12.3□□□□□ -0.44
NCKIPSD-202ENST00000413374 PARK7Q99497 189 aaKnown RBP12.3□□□□□ -0.44
NCKIPSD-202ENST00000413374 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.3□□□□□ -0.44
NCKIPSD-202ENST00000413374 AS3MTQ9HBK9 375 aa12.3□□□□□ -0.44
NCKIPSD-202ENST00000413374 PSMC4P43686 418 aa12.29□□□□□ -0.44
NCKIPSD-202ENST00000413374 LACTBP83111 547 aaPredicted RBP12.29□□□□□ -0.44
NCKIPSD-202ENST00000413374 MTMR2Q13614 643 aa12.29□□□□□ -0.44
NCKIPSD-202ENST00000413374 ARHGEF6Q15052 776 aa12.29□□□□□ -0.44
NCKIPSD-202ENST00000413374 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
NCKIPSD-202ENST00000413374 PUS7LQ9H0K6 701 aaKnown RBP12.29□□□□□ -0.44
NCKIPSD-202ENST00000413374 SERPINB13Q9UIV8 391 aa12.29□□□□□ -0.44
NCKIPSD-202ENST00000413374 ZBTB21Q9ULJ3 1066 aa12.29□□□□□ -0.44
NCKIPSD-202ENST00000413374 AGTPBP1Q9UPW5 1226 aa12.29□□□□□ -0.44
NCKIPSD-202ENST00000413374 SUPT16HQ9Y5B9 1047 aaKnown RBP12.29□□□□□ -0.44
NCKIPSD-202ENST00000413374 PTCH2Q9Y6C5 1203 aa12.29□□□□□ -0.44
NCKIPSD-202ENST00000413374 COL2A1P02458 1487 aaPredicted RBP12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 CYP2D7A0A087X1C5 515 aa12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 SMIM22K7EJ46 135 aa12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 ASNSP08243 561 aa12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 MLLT1Q03111 559 aaPredicted RBP12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 RAB3GAP1Q15042 981 aa12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 CERKLQ49MI3 558 aaPredicted RBP12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 ZSCAN25Q6NSZ9 544 aa12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 TATDN1Q6P1N9 297 aa12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 TMED8Q6PL24 325 aaPredicted RBP12.28□□□□□ -0.44
NCKIPSD-202ENST00000413374 EXOC6Q8TAG9 804 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms