RNA–Protein interactions for RNA: ENST00000413333.1

HMGB3P31-201, Transcript of high mobility group box 3 pseudogene 31, humanhuman

BASIC

Gene HMGB3P31, Length 595 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P31-201ENST00000413333 WDR18Q9BV38 432 aa6.95□□□□□ -1.3
HMGB3P31-201ENST00000413333 SLC22A31A6NKX4 558 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 TM4SF5O14894 197 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 DLGAP3O95886 979 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 HSD3B2P26439 372 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 ZC3H12AQ5D1E8 599 aaKnown RBP6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 ARSHQ5FYA8 562 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 AKAP4Q5JQC9 854 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 PPM1JQ5JR12 505 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 LYPD4Q6UWN0 246 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 LILRB2Q8N423 598 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 C19orf47Q8N9M1 422 aaKnown RBP6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 SH3TC2Q8TF17 1288 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 UBASH3BQ8TF42 649 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 ATG4CQ96DT6 458 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 KANSL2Q9H9L4 492 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 RRAGCQ9HB90 399 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 PRDM6Q9NQX0 595 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 GMIPQ9P107 970 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 HIF3AQ9Y2N7 669 aa6.94□□□□□ -1.3
HMGB3P31-201ENST00000413333 CHURC1-FNTBB4DL54 471 aa6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 DNAJA2O60884 412 aa6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 DEAF1O75398 565 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 CELA2BP08218 269 aaPredicted RBP6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 NME1P15531 152 aaKnown RBP6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 ID3Q02535 119 aa6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 RASGRF1Q13972 1273 aa6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 ZYXQ15942 572 aaKnown RBP6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 DUOXA2Q1HG44 320 aa6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 MTERF2Q49AM1 385 aa6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 UNC5AQ6ZN44 842 aa6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 NLRC3Q7RTR2 1065 aa6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 FAM178BQ8IXR5 827 aa6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 PFDN2Q9UHV9 154 aa6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 TACC3Q9Y6A5 838 aa6.93□□□□□ -1.3
HMGB3P31-201ENST00000413333 COL9A3Q14050 684 aaPredicted RBP6.92□□□□□ -1.3
HMGB3P31-201ENST00000413333 EXOSC6Q5RKV6 272 aaKnown RBP6.92□□□□□ -1.3
HMGB3P31-201ENST00000413333 RUSC1Q9BVN2 902 aa6.92□□□□□ -1.3
HMGB3P31-201ENST00000413333 WNT10AQ9GZT5 417 aa6.92□□□□□ -1.3
HMGB3P31-201ENST00000413333 FANCLQ9NW38 375 aa6.92□□□□□ -1.3
HMGB3P31-201ENST00000413333 PCDHB10Q9UN67 800 aa6.92□□□□□ -1.3
HMGB3P31-201ENST00000413333 PCDHGC5Q9Y5F6 944 aa6.92□□□□□ -1.3
HMGB3P31-201ENST00000413333 SLC12A7Q9Y666 1083 aa6.92□□□□□ -1.3
HMGB3P31-201ENST00000413333 ESYT3A0FGR9 886 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 UPK3BL1B0FP48 263 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 UPK3BL2E5RIL1 263 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 ENPP3O14638 875 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 TMPRSS2O15393 492 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 ACRP10323 421 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 RAG1P15918 1043 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 CDK11BP21127 795 aaKnown RBP6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 TMEM201Q5SNT2 666 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 VHLLQ6RSH7 139 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 ANKRD13AQ8IZ07 590 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 FAM13CQ8NE31 585 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 NEDD1Q8NHV4 660 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 ACSF2Q96CM8 615 aaPredicted RBP6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 SLC9A7Q96T83 725 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 CNNM2Q9H8M5 875 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 PPP1R9AQ9ULJ8 1098 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 AP4E1Q9UPM8 1137 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 KDM2BQ8NHM5 1336 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 LTBP3Q9NS15 1303 aa6.91□□□□□ -1.3
HMGB3P31-201ENST00000413333 CDC45O75419 566 aa6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 SLURP2P0DP57 97 aa6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 POLR2BP30876 1174 aaKnown RBP6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 ERVK-24P63145 666 aa6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 CDCP2Q5VXM1 449 aa6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 MRM1Q6IN84 353 aaKnown RBP6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 ILDR2Q71H61 639 aa6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 SPATC1Q76KD6 591 aa6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 PHACTR4Q8IZ21 702 aa6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 DTWD1Q8N5C7 304 aa6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 TAB3Q8N5C8 712 aaPredicted RBP6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 DCAF11Q8TEB1 546 aa6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 APPBP2Q92624 585 aa6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 TJP2Q9UDY2 1190 aa6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 ADAM30Q9UKF2 790 aa6.9□□□□□ -1.3
HMGB3P31-201ENST00000413333 A0A0A0MRY4 1105 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 TNFRSF10CO14798 259 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 DIAPH1O60610 1272 aaKnown RBP6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 WISP1O95388 367 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 DGKGP49619 791 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 RAC1P63000 192 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 RING1Q06587 406 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 SSRP1Q08945 709 aaKnown RBP6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 GNPTABQ3T906 1256 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 ZBTB37Q5TC79 503 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 NUTM2GQ5VZR2 741 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 INTS3Q68E01 1043 aaKnown RBP6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 KIAA1211LQ6NV74 962 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 ACAD11Q709F0 780 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 ZNF507Q8TCN5 953 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 WHAMMQ8TF30 809 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 FANCD2OSQ96PS1 177 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 LRRC4BQ9NT99 713 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 LEMD3Q9Y2U8 911 aa6.89□□□□□ -1.31
HMGB3P31-201ENST00000413333 DLL1O00548 723 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 FANCGO15287 622 aa6.88□□□□□ -1.31
HMGB3P31-201ENST00000413333 RNGTTO60942 597 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms