RNA–Protein interactions for RNA: ENST00000413288.1

FAM238B-201, Transcript of family with sequence similarity 238 member B, humanhuman

TSL 3

Gene FAM238B, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238B-201ENST00000413288 PCDHAC2Q9Y5I4 1007 aa11.7□□□□□ -0.54
FAM238B-201ENST00000413288 SIPA1L1O43166 1804 aa11.7□□□□□ -0.54
FAM238B-201ENST00000413288 FLT1P17948 1338 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 RANBP6O60518 1105 aaKnown RBP11.69□□□□□ -0.54
FAM238B-201ENST00000413288 BRD1O95696 1058 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 SLC3A2P08195 630 aaKnown RBP11.69□□□□□ -0.54
FAM238B-201ENST00000413288 RXRAP19793 462 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 MCM4P33991 863 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 IARSP41252 1262 aaKnown RBP11.69□□□□□ -0.54
FAM238B-201ENST00000413288 RBM5P52756 815 aaKnown RBP eCLIP11.69□□□□□ -0.54
FAM238B-201ENST00000413288 FKBP1AP62942 108 aaKnown RBP11.69□□□□□ -0.54
FAM238B-201ENST00000413288 WTAPQ15007 396 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 C12orf60Q5U649 245 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 CERS3Q8IU89 383 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 AMOTL1Q8IY63 956 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 IGDCC4Q8TDY8 1250 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 TEKT1Q969V4 418 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 DYNLL2Q96FJ2 89 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 LY9Q9HBG7 655 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 USP40Q9NVE5 1235 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.69□□□□□ -0.54
FAM238B-201ENST00000413288 CD2APQ9Y5K6 639 aa11.69□□□□□ -0.54
FAM238B-201ENST00000413288 ERICH2A1L162 156 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 CCDC69A6NI79 296 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 STX6O43752 255 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 PPFIA3O75145 1194 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 RAD17O75943 681 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 CTDNEP1O95476 244 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 SYT1P21579 422 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 FOSBP53539 338 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 EVCP57679 992 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 PDE4BQ07343 736 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 FAM47AQ5JRC9 791 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 HHIPL2Q6UWX4 724 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 NIM1KQ8IY84 436 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 CCDC144CPQ8IYA2 1237 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 NSUN7Q8NE18 718 aaKnown RBP11.68□□□□□ -0.54
FAM238B-201ENST00000413288 NLGN2Q8NFZ4 835 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 CHAMP1Q96JM3 812 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 GBP4Q96PP9 640 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 MYL10Q9BUA6 226 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 HPS5Q9UPZ3 1129 aa11.68□□□□□ -0.54
FAM238B-201ENST00000413288 DICER1Q9UPY3 1922 aaKnown RBP11.68□□□□□ -0.54
FAM238B-201ENST00000413288 TNKSO95271 1327 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 WDR33Q9C0J8 1336 aaKnown RBP11.67□□□□□ -0.54
FAM238B-201ENST00000413288 MYH4Q9Y623 1939 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 PTPDC1A2A3K4 754 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 VPS37CA5D8V6 355 aaPredicted RBP11.67□□□□□ -0.54
FAM238B-201ENST00000413288 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 PSMD14O00487 310 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 ORC4O43929 436 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 BAG4O95429 457 aaKnown RBP11.67□□□□□ -0.54
FAM238B-201ENST00000413288 FGRP09769 529 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 PCP11498 1178 aaKnown RBP11.67□□□□□ -0.54
FAM238B-201ENST00000413288 PLCD1P51178 756 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 SART3Q15020 963 aaKnown RBP11.67□□□□□ -0.54
FAM238B-201ENST00000413288 FOXD4L6Q3SYB3 417 aaPredicted RBP11.67□□□□□ -0.54
FAM238B-201ENST00000413288 LARP1BQ659C4 914 aaKnown RBP11.67□□□□□ -0.54
FAM238B-201ENST00000413288 CDC42EP5Q6NZY7 148 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 FOXD4L3Q6VB84 417 aaPredicted RBP11.67□□□□□ -0.54
FAM238B-201ENST00000413288 MICU3Q86XE3 530 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 LLPHQ9BRT6 129 aaKnown RBP11.67□□□□□ -0.54
FAM238B-201ENST00000413288 UBAC1Q9BSL1 405 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 TAOK3Q9H2K8 898 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 DDX4Q9NQI0 724 aaKnown RBP11.67□□□□□ -0.54
FAM238B-201ENST00000413288 ROBO3Q96MS0 1386 aa11.67□□□□□ -0.54
FAM238B-201ENST00000413288 SBF1O95248 1867 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 TSPY2A6NKD2 308 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 GOLGA8AA7E2F4 631 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 NFKBIEO00221 500 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 ZBTB43O43298 467 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 ZSCAN22P10073 491 aaPredicted RBP11.66□□□□□ -0.54
FAM238B-201ENST00000413288 LIFRP42702 1097 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 METAP2P50579 478 aaKnown RBP eCLIP11.66□□□□□ -0.54
FAM238B-201ENST00000413288 RASSF7Q02833 373 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 APOBEC3HQ6NTF7 200 aaKnown RBP11.66□□□□□ -0.54
FAM238B-201ENST00000413288 RSBN1LQ6PCB5 846 aaPredicted RBP11.66□□□□□ -0.54
FAM238B-201ENST00000413288 APOA5Q6Q788 366 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 FAM184AQ8NB25 1140 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 SLC44A5Q8NCS7 719 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 SMARCC2Q8TAQ2 1214 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 ZDHHC15Q96MV8 337 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 ZSCAN10Q96SZ4 725 aaPredicted RBP11.66□□□□□ -0.54
FAM238B-201ENST00000413288 VPS33BQ9H267 617 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 MKNK2Q9HBH9 465 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 SPON1Q9HCB6 807 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 MTMR6Q9Y217 621 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 SLC12A7Q9Y666 1083 aa11.66□□□□□ -0.54
FAM238B-201ENST00000413288 CPLX1O14810 134 aa11.65□□□□□ -0.54
FAM238B-201ENST00000413288 NMT2O60551 498 aa11.65□□□□□ -0.54
FAM238B-201ENST00000413288 WDHD1O75717 1129 aaPredicted RBP11.65□□□□□ -0.54
FAM238B-201ENST00000413288 F13A1P00488 732 aa11.65□□□□□ -0.54
FAM238B-201ENST00000413288 CDC27P30260 824 aa11.65□□□□□ -0.54
FAM238B-201ENST00000413288 CACNB3P54284 484 aa11.65□□□□□ -0.54
FAM238B-201ENST00000413288 SEC23AQ15436 765 aa11.65□□□□□ -0.54
FAM238B-201ENST00000413288 CFAP100Q494V2 611 aa11.65□□□□□ -0.54
FAM238B-201ENST00000413288 MCTP1Q6DN14 999 aa11.65□□□□□ -0.54
FAM238B-201ENST00000413288 SYNE3Q6ZMZ3 975 aa11.65□□□□□ -0.54
FAM238B-201ENST00000413288 SGMS1Q86VZ5 419 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms