RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 C16orf86Q6ZW13 317 aa12.54□□□□□ -0.4
SMARCAL1-204ENST00000412913 SLC44A5Q8NCS7 719 aa12.54□□□□□ -0.4
SMARCAL1-204ENST00000412913 DYNLL2Q96FJ2 89 aa12.54□□□□□ -0.4
SMARCAL1-204ENST00000412913 JAKMIP1Q96N16 626 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-204ENST00000412913 TEPSINQ96N21 525 aa12.54□□□□□ -0.4
SMARCAL1-204ENST00000412913 TM6SF1Q9BZW5 370 aa12.54□□□□□ -0.4
SMARCAL1-204ENST00000412913 EHD4Q9H223 541 aa12.54□□□□□ -0.4
SMARCAL1-204ENST00000412913 TAF1DQ9H5J8 278 aaPredicted RBP12.54□□□□□ -0.4
SMARCAL1-204ENST00000412913 RBM19Q9Y4C8 960 aaKnown RBP12.54□□□□□ -0.4
SMARCAL1-204ENST00000412913 CD2BP2O95400 341 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 POLR3DP05423 398 aaPredicted RBP12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 CASTP20810 708 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 ANTXR2P58335 489 aa12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 KRT32Q14532 448 aa12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 RABEP1Q15276 862 aa12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 USP50Q70EL3 339 aaPredicted RBP12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 METTL16Q86W50 562 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 TTC14Q96N46 770 aa12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 UPF3BQ9BZI7 483 aaKnown RBP12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 TMEM39BQ9GZU3 492 aa12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 ZSWIM6Q9HCJ5 1215 aa12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 PLIN4Q96Q06 1357 aa12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 PHIPQ8WWQ0 1821 aa12.53□□□□□ -0.4
SMARCAL1-204ENST00000412913 MYH4Q9Y623 1939 aa12.52□□□□□ -0.4
SMARCAL1-204ENST00000412913 IQCA1LA6NCM1 817 aa12.52□□□□□ -0.41
SMARCAL1-204ENST00000412913 ORC4O43929 436 aa12.52□□□□□ -0.41
SMARCAL1-204ENST00000412913 CYB5R4Q7L1T6 521 aa12.52□□□□□ -0.41
SMARCAL1-204ENST00000412913 APOBEC3FQ8IUX4 373 aaKnown RBP12.52□□□□□ -0.41
SMARCAL1-204ENST00000412913 STK11IPQ8N1F8 1099 aa12.52□□□□□ -0.41
SMARCAL1-204ENST00000412913 NEK1Q96PY6 1258 aa12.52□□□□□ -0.41
SMARCAL1-204ENST00000412913 DHX36Q9H2U1 1008 aaKnown RBP12.52□□□□□ -0.41
SMARCAL1-204ENST00000412913 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 FAM196BA6NMK8 535 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 B4E1Z4 1266 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 PRDM1O75626 825 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 HLA-DOAP06340 250 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 POTEIP0CG38 1075 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 POTEJP0CG39 1038 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 PCP11498 1178 aaKnown RBP12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 RASA1P20936 1047 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 RPS6KB1P23443 525 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 SHMT1P34896 483 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 CDK8P49336 464 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 EXOSC10Q01780 885 aaKnown RBP12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 TNFAIP1Q13829 316 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 RASA3Q14644 834 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 RUFY3Q7L099 469 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 TTC6Q86TZ1 520 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 AMOTL1Q8IY63 956 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 NCOA7Q8NI08 942 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 TCEANC2Q96MN5 208 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 CSRNP1Q96S65 589 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 RNF41Q9H4P4 317 aaPredicted RBP12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 SERPINB13Q9UIV8 391 aa12.51□□□□□ -0.41
SMARCAL1-204ENST00000412913 PSMA5P28066 241 aa12.5□□□□□ -0.41
SMARCAL1-204ENST00000412913 TNNI2P48788 182 aa12.5□□□□□ -0.41
SMARCAL1-204ENST00000412913 BLOC1S2Q6QNY1 142 aa12.5□□□□□ -0.41
SMARCAL1-204ENST00000412913 MFSD6Q6ZSS7 791 aa12.5□□□□□ -0.41
SMARCAL1-204ENST00000412913 AGXT2Q9BYV1 514 aa12.5□□□□□ -0.41
SMARCAL1-204ENST00000412913 CNNM2Q9H8M5 875 aa12.5□□□□□ -0.41
SMARCAL1-204ENST00000412913 NMRK2Q9NPI5 230 aa12.5□□□□□ -0.41
SMARCAL1-204ENST00000412913 PPP2R3BQ9Y5P8 575 aa12.5□□□□□ -0.41
SMARCAL1-204ENST00000412913 WDR19Q8NEZ3 1342 aa12.5□□□□□ -0.41
SMARCAL1-204ENST00000412913 TRPM7Q96QT4 1865 aa12.5□□□□□ -0.41
SMARCAL1-204ENST00000412913 ADM5C9JUS6 153 aa12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 KDM4AO75164 1064 aa12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 MAP3K10Q02779 954 aa12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 PDE4BQ07343 736 aa12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 TOB2Q14106 344 aaPredicted RBP12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 RRP1BQ14684 758 aaKnown RBP12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 TATDN1Q6P1N9 297 aa12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 RALYLQ86SE5 291 aaKnown RBP12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 ZC3H15Q8WU90 426 aaKnown RBP12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 DEFB129Q9H1M3 183 aa12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 PI4KBQ9UBF8 816 aa12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 SWAP70Q9UH65 585 aa12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 TAOK2Q9UL54 1235 aa12.49□□□□□ -0.41
SMARCAL1-204ENST00000412913 PRC1O43663 620 aa12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 SLC3A2P08195 630 aaKnown RBP12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 HMGB1P09429 215 aaKnown RBP12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 NEK4P51957 841 aa12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 AK2P54819 239 aa12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 SHROOM1Q2M3G4 852 aaPredicted RBP12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 RRP12Q5JTH9 1297 aaKnown RBP12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 DLK2Q6UY11 383 aa12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 DHX32Q7L7V1 743 aaKnown RBP12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 CHST3Q7LGC8 479 aa12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 PNMA8AQ86V59 439 aaPredicted RBP12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 ZSCAN29Q8IWY8 852 aaPredicted RBP12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 LRRC2Q9BYS8 371 aa12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 KRT23Q9C075 422 aa12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 ALDH8A1Q9H2A2 487 aaPredicted RBP12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 RRAGCQ9HB90 399 aa12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 GPHNQ9NQX3 736 aaPredicted RBP12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 HERC5Q9UII4 1024 aaKnown RBP12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 CYP46A1Q9Y6A2 500 aa12.48□□□□□ -0.41
SMARCAL1-204ENST00000412913 PTPRFP10586 1907 aa12.47□□□□□ -0.41
SMARCAL1-204ENST00000412913 IGKV6D-41A0A0C4DH26 115 aa12.47□□□□□ -0.41
SMARCAL1-204ENST00000412913 SH2B2O14492 632 aaPredicted RBP12.47□□□□□ -0.41
SMARCAL1-204ENST00000412913 TBC1D12O60347 775 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms