RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 USP21Q9UK80 565 aa19.06■□□□□ 0.64
HCG18-233ENST00000412685 TNKSO95271 1327 aa19.05■□□□□ 0.64
HCG18-233ENST00000412685 SEC23AQ15436 765 aa19.05■□□□□ 0.64
HCG18-233ENST00000412685 NBPF11Q86T75 865 aa19.05■□□□□ 0.64
HCG18-233ENST00000412685 AMIGO3Q86WK7 504 aa19.05■□□□□ 0.64
HCG18-233ENST00000412685 DHX40Q8IX18 779 aaKnown RBP19.05■□□□□ 0.64
HCG18-233ENST00000412685 FANCBQ8NB91 859 aa19.05■□□□□ 0.64
HCG18-233ENST00000412685 KIAA1524Q8TCG1 905 aa19.05■□□□□ 0.64
HCG18-233ENST00000412685 PYCARDQ9ULZ3 195 aa19.05■□□□□ 0.64
HCG18-233ENST00000412685 HIBADHP31937 336 aaKnown RBP19.05■□□□□ 0.64
HCG18-233ENST00000412685 CRACR2BQ8N4Y2 399 aaPredicted RBP19.05■□□□□ 0.64
HCG18-233ENST00000412685 NUP133Q8WUM0 1156 aa19.05■□□□□ 0.64
HCG18-233ENST00000412685 ARHGEF1Q92888 912 aaKnown RBP19.05■□□□□ 0.64
HCG18-233ENST00000412685 NSUN4Q96CB9 384 aaKnown RBP19.05■□□□□ 0.64
HCG18-233ENST00000412685 NAT10Q9H0A0 1025 aaKnown RBP19.05■□□□□ 0.64
HCG18-233ENST00000412685 TFCP2L1Q9NZI6 479 aa19.05■□□□□ 0.64
HCG18-233ENST00000412685 NHSQ6T4R5 1651 aa19.04■□□□□ 0.64
HCG18-233ENST00000412685 PDS5AQ29RF7 1337 aaKnown RBP19.04■□□□□ 0.64
HCG18-233ENST00000412685 MMP1P03956 469 aa19.04■□□□□ 0.64
HCG18-233ENST00000412685 GLIPR1L2Q4G1C9 344 aa19.04■□□□□ 0.64
HCG18-233ENST00000412685 CCDC186Q7Z3E2 898 aa19.04■□□□□ 0.64
HCG18-233ENST00000412685 NOSTRINQ8IVI9 506 aa19.04■□□□□ 0.64
HCG18-233ENST00000412685 CMTR1Q8N1G2 835 aaKnown RBP19.04■□□□□ 0.64
HCG18-233ENST00000412685 CCDC82Q8N4S0 544 aa19.04■□□□□ 0.64
HCG18-233ENST00000412685 CYP2D7A0A087X1C5 515 aa19.04■□□□□ 0.64
HCG18-233ENST00000412685 DEXIO95424 95 aa19.04■□□□□ 0.64
HCG18-233ENST00000412685 SLC3A2P08195 630 aaKnown RBP19.04■□□□□ 0.64
HCG18-233ENST00000412685 SAFBQ15424 915 aaKnown RBP eCLIP19.04■□□□□ 0.64
HCG18-233ENST00000412685 BAZ2AQ9UIF9 1905 aaKnown RBP19.03■□□□□ 0.64
HCG18-233ENST00000412685 CDC25BP30305 580 aa19.03■□□□□ 0.64
HCG18-233ENST00000412685 MECOMQ03112 1051 aa19.03■□□□□ 0.64
HCG18-233ENST00000412685 ZRSR1Q15695 479 aaKnown RBP19.03■□□□□ 0.64
HCG18-233ENST00000412685 FBXW7Q969H0 707 aa19.03■□□□□ 0.64
HCG18-233ENST00000412685 NRBP1Q9UHY1 535 aa19.03■□□□□ 0.64
HCG18-233ENST00000412685 THSD7AQ9UPZ6 1657 aa19.03■□□□□ 0.64
HCG18-233ENST00000412685 BTBD18B2RXH4 712 aa19.03■□□□□ 0.64
HCG18-233ENST00000412685 DNTTIP2Q5QJE6 756 aaKnown RBP19.03■□□□□ 0.64
HCG18-233ENST00000412685 DIS3L2Q8IYB7 885 aaKnown RBP19.03■□□□□ 0.64
HCG18-233ENST00000412685 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.03■□□□□ 0.64
HCG18-233ENST00000412685 CLIP2Q9UDT6 1046 aa19.03■□□□□ 0.64
HCG18-233ENST00000412685 KCNJ14Q9UNX9 436 aa19.03■□□□□ 0.64
HCG18-233ENST00000412685 DUOX1Q9NRD9 1551 aa19.03■□□□□ 0.64
HCG18-233ENST00000412685 TM4SF1P30408 202 aa19.02■□□□□ 0.64
HCG18-233ENST00000412685 SHC4Q6S5L8 630 aa19.02■□□□□ 0.64
HCG18-233ENST00000412685 AOPEPQ8N6M6 819 aa19.02■□□□□ 0.64
HCG18-233ENST00000412685 ENAHQ8N8S7 591 aaPredicted RBP19.02■□□□□ 0.64
HCG18-233ENST00000412685 ZSCAN10Q96SZ4 725 aaPredicted RBP19.02■□□□□ 0.64
HCG18-233ENST00000412685 HPSEQ9Y251 543 aa19.02■□□□□ 0.64
HCG18-233ENST00000412685 SYKP43405 635 aa19.02■□□□□ 0.64
HCG18-233ENST00000412685 DPCR1Q3MIW9 517 aa19.02■□□□□ 0.64
HCG18-233ENST00000412685 CTR9Q6PD62 1173 aa19.02■□□□□ 0.64
HCG18-233ENST00000412685 TIGD1Q96MW7 591 aa19.02■□□□□ 0.64
HCG18-233ENST00000412685 FGRP09769 529 aa19.01■□□□□ 0.63
HCG18-233ENST00000412685 PCP11498 1178 aaKnown RBP19.01■□□□□ 0.63
HCG18-233ENST00000412685 CHAF1AQ13111 956 aaPredicted RBP19.01■□□□□ 0.63
HCG18-233ENST00000412685 PPP2R5BQ15173 497 aa19.01■□□□□ 0.63
HCG18-233ENST00000412685 MRFAP1L1Q96HT8 127 aa19.01■□□□□ 0.63
HCG18-233ENST00000412685 MYH2Q9UKX2 1941 aa19.01■□□□□ 0.63
HCG18-233ENST00000412685 MYH13Q9UKX3 1938 aa19.01■□□□□ 0.63
HCG18-233ENST00000412685 PRDM1O75626 825 aa19.01■□□□□ 0.63
HCG18-233ENST00000412685 FOXP1Q9H334 677 aaPredicted RBP19.01■□□□□ 0.63
HCG18-233ENST00000412685 FAM237AA0A1B0GTK4 181 aa19■□□□□ 0.63
HCG18-233ENST00000412685 USP17L12C9JPN9 530 aa19■□□□□ 0.63
HCG18-233ENST00000412685 USP17L21D6R901 530 aa19■□□□□ 0.63
HCG18-233ENST00000412685 NPHP1O15259 732 aa19■□□□□ 0.63
HCG18-233ENST00000412685 CUTAO60888 179 aa19■□□□□ 0.63
HCG18-233ENST00000412685 PRDX5P30044 214 aa19■□□□□ 0.63
HCG18-233ENST00000412685 RBM6P78332 1123 aaKnown RBP19■□□□□ 0.63
HCG18-233ENST00000412685 HSP90AA2PQ14568 343 aaPredicted RBP19■□□□□ 0.63
HCG18-233ENST00000412685 RESP18Q5W5W9 173 aa19■□□□□ 0.63
HCG18-233ENST00000412685 PKNOX2Q96KN3 472 aa19■□□□□ 0.63
HCG18-233ENST00000412685 CLIC6Q96NY7 704 aa19■□□□□ 0.63
HCG18-233ENST00000412685 TXNRD3Q86VQ6 643 aa19■□□□□ 0.63
HCG18-233ENST00000412685 IQCA1Q86XH1 822 aa19■□□□□ 0.63
HCG18-233ENST00000412685 RNF26Q9BY78 433 aaPredicted RBP19■□□□□ 0.63
HCG18-233ENST00000412685 AATFQ9NY61 560 aaKnown RBP eCLIP19■□□□□ 0.63
HCG18-233ENST00000412685 BIN1O00499 593 aa18.99■□□□□ 0.63
HCG18-233ENST00000412685 RFC4P35249 363 aa18.99■□□□□ 0.63
HCG18-233ENST00000412685 TOB1P50616 345 aaPredicted RBP18.99■□□□□ 0.63
HCG18-233ENST00000412685 IFIT1BQ5T764 474 aaKnown RBP18.99■□□□□ 0.63
HCG18-233ENST00000412685 BPIFA3Q9BQP9 254 aa18.99■□□□□ 0.63
HCG18-233ENST00000412685 CRNKL1Q9BZJ0 848 aaKnown RBP18.99■□□□□ 0.63
HCG18-233ENST00000412685 NLRP12P59046 1061 aa18.99■□□□□ 0.63
HCG18-233ENST00000412685 LRMPQ12912 555 aa18.99■□□□□ 0.63
HCG18-233ENST00000412685 CATIPQ7Z7H3 387 aa18.99■□□□□ 0.63
HCG18-233ENST00000412685 DCP1AQ9NPI6 582 aaPredicted RBP18.99■□□□□ 0.63
HCG18-233ENST00000412685 TAF1LQ8IZX4 1826 aa18.98■□□□□ 0.63
HCG18-233ENST00000412685 UQCRHLA0A096LP55 91 aa18.98■□□□□ 0.63
HCG18-233ENST00000412685 UQCRHP07919 91 aa18.98■□□□□ 0.63
HCG18-233ENST00000412685 CCDC144BQ3MJ40 725 aa18.98■□□□□ 0.63
HCG18-233ENST00000412685 RILPL1Q5EBL4 403 aa18.98■□□□□ 0.63
HCG18-233ENST00000412685 IRS2Q9Y4H2 1338 aa18.98■□□□□ 0.63
HCG18-233ENST00000412685 NR5A1Q13285 461 aa18.98■□□□□ 0.63
HCG18-233ENST00000412685 KRI1Q8N9T8 703 aaKnown RBP18.98■□□□□ 0.63
HCG18-233ENST00000412685 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.98■□□□□ 0.63
HCG18-233ENST00000412685 SPATA31A6Q5VVP1 1343 aa18.98■□□□□ 0.63
HCG18-233ENST00000412685 TNRC6CQ9HCJ0 1690 aaKnown RBP18.98■□□□□ 0.63
HCG18-233ENST00000412685 AKAP17AQ02040 695 aaKnown RBP18.97■□□□□ 0.63
HCG18-233ENST00000412685 TRAPPC3LQ5T215 181 aa18.97■□□□□ 0.63
HCG18-233ENST00000412685 ATP8A2Q9NTI2 1148 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms