RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.75■□□□□ 0.279e-8■■■■■ 116.8
CPNE1-206ENST00000412056 HELLSQ9NRZ9 838 aa16.75■□□□□ 0.27
CPNE1-206ENST00000412056 ATP8A2Q9NTI2 1148 aa16.75■□□□□ 0.27
CPNE1-206ENST00000412056 PI4KBQ9UBF8 816 aa16.75■□□□□ 0.27
CPNE1-206ENST00000412056 ZNF112Q9UJU3 913 aa16.75■□□□□ 0.27
CPNE1-206ENST00000412056 WDR33Q9C0J8 1336 aaKnown RBP16.74■□□□□ 0.27
CPNE1-206ENST00000412056 GSG1L2A8MUP6 293 aa16.74■□□□□ 0.27
CPNE1-206ENST00000412056 FAM155AB1AL88 458 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-206ENST00000412056 ECE1P42892 770 aa16.74■□□□□ 0.27
CPNE1-206ENST00000412056 VGLL4Q14135 290 aa16.74■□□□□ 0.27
CPNE1-206ENST00000412056 ELP3Q9H9T3 547 aa16.74■□□□□ 0.27
CPNE1-206ENST00000412056 EPB41L4AQ9HCS5 686 aaPredicted RBP16.74■□□□□ 0.27
CPNE1-206ENST00000412056 DIAPH3Q9NSV4 1193 aa16.74■□□□□ 0.27
CPNE1-206ENST00000412056 PTPRFP10586 1907 aa16.74■□□□□ 0.27
CPNE1-206ENST00000412056 PHF20L1A8MW92 1017 aa16.73■□□□□ 0.27
CPNE1-206ENST00000412056 TBC1D12O60347 775 aa16.73■□□□□ 0.27
CPNE1-206ENST00000412056 AOC2O75106 756 aa16.73■□□□□ 0.27
CPNE1-206ENST00000412056 POLR3DP05423 398 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-206ENST00000412056 GNAT2P19087 354 aa16.73■□□□□ 0.27
CPNE1-206ENST00000412056 PLCD1P51178 756 aa16.73■□□□□ 0.27
CPNE1-206ENST00000412056 MCMDC2Q4G0Z9 681 aa16.73■□□□□ 0.27
CPNE1-206ENST00000412056 TTC6Q86TZ1 520 aa16.73■□□□□ 0.27
CPNE1-206ENST00000412056 ZNF589Q86UQ0 364 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-206ENST00000412056 CRACR2BQ8N4Y2 399 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-206ENST00000412056 ZKSCAN4Q969J2 545 aaPredicted RBP16.73■□□□□ 0.27
CPNE1-206ENST00000412056 SLC10A4Q96EP9 437 aa16.73■□□□□ 0.27
CPNE1-206ENST00000412056 CSADQ9Y600 493 aa16.73■□□□□ 0.27
CPNE1-206ENST00000412056 SNCAIPQ9Y6H5 919 aa16.73■□□□□ 0.27
CPNE1-206ENST00000412056 CYP2D7A0A087X1C5 515 aa16.72■□□□□ 0.27
CPNE1-206ENST00000412056 UNCXA6NJT0 531 aa16.72■□□□□ 0.27
CPNE1-206ENST00000412056 SMIM22K7EJ46 135 aa16.72■□□□□ 0.27
CPNE1-206ENST00000412056 HIP1O00291 1037 aa16.72■□□□□ 0.27
CPNE1-206ENST00000412056 FOXP2O15409 715 aa16.72■□□□□ 0.27
CPNE1-206ENST00000412056 CWC27Q6UX04 472 aaKnown RBP16.72■□□□□ 0.27
CPNE1-206ENST00000412056 METTL16Q86W50 562 aaKnown RBP16.72■□□□□ 0.27
CPNE1-206ENST00000412056 CNKSR2Q8WXI2 1034 aa16.72■□□□□ 0.27
CPNE1-206ENST00000412056 CCDC102AQ96A19 550 aa16.72■□□□□ 0.27
CPNE1-206ENST00000412056 DDRGK1Q96HY6 314 aa16.72■□□□□ 0.27
CPNE1-206ENST00000412056 ZIC5Q96T25 663 aa16.72■□□□□ 0.27
CPNE1-206ENST00000412056 HERC5Q9UII4 1024 aaKnown RBP16.72■□□□□ 0.27
CPNE1-206ENST00000412056 LAMA4Q16363 1823 aa16.72■□□□□ 0.27
CPNE1-206ENST00000412056 USP17L12C9JPN9 530 aa16.71■□□□□ 0.27
CPNE1-206ENST00000412056 USP17L21D6R901 530 aa16.71■□□□□ 0.27
CPNE1-206ENST00000412056 APPP05067 770 aa16.71■□□□□ 0.27
CPNE1-206ENST00000412056 GJA5P36382 358 aa16.71■□□□□ 0.27
CPNE1-206ENST00000412056 MKRN3Q13064 507 aaKnown RBP16.71■□□□□ 0.27
CPNE1-206ENST00000412056 RRP1BQ14684 758 aaKnown RBP16.71■□□□□ 0.27
CPNE1-206ENST00000412056 NOL9Q5SY16 702 aaKnown RBP16.71■□□□□ 0.27
CPNE1-206ENST00000412056 CTR9Q6PD62 1173 aa16.71■□□□□ 0.27
CPNE1-206ENST00000412056 FOXP4Q8IVH2 680 aaPredicted RBP16.71■□□□□ 0.27
CPNE1-206ENST00000412056 WNK4Q96J92 1243 aa16.71■□□□□ 0.27
CPNE1-206ENST00000412056 TRIM34Q9BYJ4 488 aa16.71■□□□□ 0.27
CPNE1-206ENST00000412056 EHD4Q9H223 541 aa16.71■□□□□ 0.27
CPNE1-206ENST00000412056 SERPINB13Q9UIV8 391 aa16.71■□□□□ 0.27
CPNE1-206ENST00000412056 CCDC171Q6TFL3 1326 aa16.7■□□□□ 0.26
CPNE1-206ENST00000412056 PATL2C9JE40 543 aaKnown RBP16.7■□□□□ 0.26
CPNE1-206ENST00000412056 CHMLP26374 656 aa16.7■□□□□ 0.26
CPNE1-206ENST00000412056 TDO2P48775 406 aa16.7■□□□□ 0.26
CPNE1-206ENST00000412056 GABPAQ06546 454 aa16.7■□□□□ 0.26
CPNE1-206ENST00000412056 BMP2KLQ5H9B9 411 aa16.7■□□□□ 0.26
CPNE1-206ENST00000412056 C12orf60Q5U649 245 aa16.7■□□□□ 0.26
CPNE1-206ENST00000412056 VPS53Q5VIR6 699 aa16.7■□□□□ 0.26
CPNE1-206ENST00000412056 SPRYD7Q5W111 196 aa16.7■□□□□ 0.26
CPNE1-206ENST00000412056 GIMAP6Q6P9H5 292 aa16.7■□□□□ 0.26
CPNE1-206ENST00000412056 IFNL3Q8IZI9 196 aa16.7■□□□□ 0.26
CPNE1-206ENST00000412056 OPTNQ96CV9 577 aa16.7■□□□□ 0.26
CPNE1-206ENST00000412056 IL25Q9H293 177 aa16.7■□□□□ 0.26
CPNE1-206ENST00000412056 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-206ENST00000412056 ARPP21Q9UBL0 812 aaPredicted RBP16.7■□□□□ 0.26
CPNE1-206ENST00000412056 SPDYE5A6NIY4 337 aa16.69■□□□□ 0.26
CPNE1-206ENST00000412056 CTNND1O60716 968 aaKnown RBP16.69■□□□□ 0.26
CPNE1-206ENST00000412056 NOGQ13253 232 aa16.69■□□□□ 0.26
CPNE1-206ENST00000412056 AMOTL1Q8IY63 956 aa16.69■□□□□ 0.26
CPNE1-206ENST00000412056 SCYL3Q8IZE3 742 aa16.69■□□□□ 0.26
CPNE1-206ENST00000412056 SLC44A5Q8NCS7 719 aa16.69■□□□□ 0.26
CPNE1-206ENST00000412056 DYNLL2Q96FJ2 89 aa16.69■□□□□ 0.26
CPNE1-206ENST00000412056 OTUD5Q96G74 571 aa16.69■□□□□ 0.26
CPNE1-206ENST00000412056 GDF11O95390 407 aa16.68■□□□□ 0.26
CPNE1-206ENST00000412056 SHMT1P34896 483 aa16.68■□□□□ 0.26
CPNE1-206ENST00000412056 SHROOM1Q2M3G4 852 aaPredicted RBP16.68■□□□□ 0.26
CPNE1-206ENST00000412056 SBK1Q52WX2 424 aa16.68■□□□□ 0.26
CPNE1-206ENST00000412056 ERO1BQ86YB8 467 aa16.68■□□□□ 0.26
CPNE1-206ENST00000412056 JMYQ8N9B5 988 aa16.68■□□□□ 0.26
CPNE1-206ENST00000412056 NACAP1Q9BZK3 213 aa16.68■□□□□ 0.26
CPNE1-206ENST00000412056 NAPBQ9H115 298 aa16.68■□□□□ 0.26
CPNE1-206ENST00000412056 GREB1LQ9C091 1923 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-206ENST00000412056 MINDY4BA8MYZ0 360 aa16.67■□□□□ 0.26
CPNE1-206ENST00000412056 ZBTB48P10074 688 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-206ENST00000412056 HSPD1P10809 573 aaKnown RBP16.67■□□□□ 0.26
CPNE1-206ENST00000412056 CAP2P40123 477 aa16.67■□□□□ 0.26
CPNE1-206ENST00000412056 JAG1P78504 1218 aa16.67■□□□□ 0.26
CPNE1-206ENST00000412056 KIF23Q02241 960 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-206ENST00000412056 TATDN1Q6P1N9 297 aa16.67■□□□□ 0.26
CPNE1-206ENST00000412056 CCDC84Q86UT8 332 aaPredicted RBP16.67■□□□□ 0.26
CPNE1-206ENST00000412056 RAD50Q92878 1312 aa16.67■□□□□ 0.26
CPNE1-206ENST00000412056 ROBO3Q96MS0 1386 aa16.66■□□□□ 0.26
CPNE1-206ENST00000412056 PTPRAP18433 802 aa16.66■□□□□ 0.26
CPNE1-206ENST00000412056 MAP2K2P36507 400 aa16.66■□□□□ 0.26
CPNE1-206ENST00000412056 MFAP1P55081 439 aaKnown RBP16.66■□□□□ 0.26
CPNE1-206ENST00000412056 C16orf86Q6ZW13 317 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms