RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 ZC3H4Q9UPT8 1303 aaKnown RBP22.52■■□□□ 1.2
LMO2-203ENST00000411482 RIMBP2O15034 1052 aa22.52■■□□□ 1.19
LMO2-203ENST00000411482 CDKL5O76039 1030 aa22.52■■□□□ 1.19
LMO2-203ENST00000411482 FBXO18Q8NFZ0 1043 aa22.52■■□□□ 1.19
LMO2-203ENST00000411482 SDR42E1Q8WUS8 393 aa22.52■■□□□ 1.19
LMO2-203ENST00000411482 ATP8A2Q9NTI2 1148 aa22.52■■□□□ 1.19
LMO2-203ENST00000411482 FAM217BQ9NTX9 383 aaPredicted RBP22.52■■□□□ 1.19
LMO2-203ENST00000411482 SYCE3A1L190 88 aa22.51■■□□□ 1.19
LMO2-203ENST00000411482 CPLX1O14810 134 aa22.51■■□□□ 1.19
LMO2-203ENST00000411482 IFIT3O14879 490 aaKnown RBP22.51■■□□□ 1.19
LMO2-203ENST00000411482 IL1R1P14778 569 aa22.51■■□□□ 1.19
LMO2-203ENST00000411482 PRDX5P30044 214 aa22.51■■□□□ 1.19
LMO2-203ENST00000411482 METAP2P50579 478 aaKnown RBP eCLIP22.51■■□□□ 1.19
LMO2-203ENST00000411482 NTRK3Q16288 839 aa22.51■■□□□ 1.19
LMO2-203ENST00000411482 SBK1Q52WX2 424 aa22.51■■□□□ 1.19
LMO2-203ENST00000411482 SENP2Q9HC62 589 aa22.51■■□□□ 1.19
LMO2-203ENST00000411482 ORC3Q9UBD5 711 aaPredicted RBP22.51■■□□□ 1.19
LMO2-203ENST00000411482 RCOR1Q9UKL0 485 aa22.51■■□□□ 1.19
LMO2-203ENST00000411482 SCN9AQ15858 1988 aa22.5■■□□□ 1.19
LMO2-203ENST00000411482 ZBTB43O43298 467 aa22.5■■□□□ 1.19
LMO2-203ENST00000411482 NT5C2P49902 561 aa22.5■■□□□ 1.19
LMO2-203ENST00000411482 SART3Q15020 963 aaKnown RBP22.5■■□□□ 1.19
LMO2-203ENST00000411482 SPATA32Q96LK8 384 aa22.5■■□□□ 1.19
LMO2-203ENST00000411482 EYA3Q99504 573 aa22.5■■□□□ 1.19
LMO2-203ENST00000411482 CRNKL1Q9BZJ0 848 aaKnown RBP22.5■■□□□ 1.19
LMO2-203ENST00000411482 YDJCA8MPS7 323 aa22.49■■□□□ 1.19
LMO2-203ENST00000411482 PPP4CP60510 307 aa22.49■■□□□ 1.19
LMO2-203ENST00000411482 CHAF1AQ13111 956 aaPredicted RBP22.49■■□□□ 1.19
LMO2-203ENST00000411482 CTR9Q6PD62 1173 aa22.49■■□□□ 1.19
LMO2-203ENST00000411482 CPLX2Q6PUV4 134 aaKnown RBP22.49■■□□□ 1.19
LMO2-203ENST00000411482 JDP2Q8WYK2 163 aa22.49■■□□□ 1.19
LMO2-203ENST00000411482 ZC3H12CQ9C0D7 883 aaKnown RBP22.49■■□□□ 1.19
LMO2-203ENST00000411482 TFIP11Q9UBB9 837 aaKnown RBP22.49■■□□□ 1.19
LMO2-203ENST00000411482 MYH15Q9Y2K3 1946 aa22.48■■□□□ 1.19
LMO2-203ENST00000411482 SEC23AQ15436 765 aa22.48■■□□□ 1.19
LMO2-203ENST00000411482 ESR2Q92731 530 aa22.48■■□□□ 1.19
LMO2-203ENST00000411482 RBSNQ9H1K0 784 aa22.48■■□□□ 1.19
LMO2-203ENST00000411482 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.48■■□□□ 1.19
LMO2-203ENST00000411482 ZNF541Q9H0D2 1346 aa22.48■■□□□ 1.19
LMO2-203ENST00000411482 STK36Q9NRP7 1315 aa22.48■■□□□ 1.19
LMO2-203ENST00000411482 GLTPD2A6NH11 291 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 ORC4O43929 436 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 CDC27P30260 824 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 DOK7Q18PE1 504 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 NIM1KQ8IY84 436 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 ZNF784Q8NCA9 323 aaPredicted RBP22.47■■□□□ 1.19
LMO2-203ENST00000411482 C8orf76Q96K31 380 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 ZNF396Q96N95 335 aaPredicted RBP22.47■■□□□ 1.19
LMO2-203ENST00000411482 DBNDD1Q9H9R9 158 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 CD209Q9NNX6 404 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 DCP1AQ9NPI6 582 aaPredicted RBP22.47■■□□□ 1.19
LMO2-203ENST00000411482 MKRN1Q9UHC7 482 aaKnown RBP22.47■■□□□ 1.19
LMO2-203ENST00000411482 ZNRF3Q9ULT6 936 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 SLC12A7Q9Y666 1083 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 LDHBP07195 334 aaKnown RBP22.47■■□□□ 1.19
LMO2-203ENST00000411482 NASPP49321 788 aaPredicted RBP22.47■■□□□ 1.19
LMO2-203ENST00000411482 GSTO1P78417 241 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 PPP2R5BQ15173 497 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 KCNQ5Q9NR82 932 aa22.47■■□□□ 1.19
LMO2-203ENST00000411482 CCDC69A6NI79 296 aa22.46■■□□□ 1.19
LMO2-203ENST00000411482 MINDY4BA8MYZ0 360 aa22.46■■□□□ 1.19
LMO2-203ENST00000411482 IFNAR1P17181 557 aa22.46■■□□□ 1.19
LMO2-203ENST00000411482 WTAPQ15007 396 aa22.46■■□□□ 1.19
LMO2-203ENST00000411482 NFXL1Q6ZNB6 911 aa22.46■■□□□ 1.19
LMO2-203ENST00000411482 CERS3Q8IU89 383 aa22.46■■□□□ 1.19
LMO2-203ENST00000411482 GOLGA8AA7E2F4 631 aa22.45■■□□□ 1.18
LMO2-203ENST00000411482 DDNO94850 711 aaPredicted RBP22.45■■□□□ 1.18
LMO2-203ENST00000411482 CXCL9Q07325 125 aa22.45■■□□□ 1.18
LMO2-203ENST00000411482 BRAPQ7Z569 592 aa22.45■■□□□ 1.18
LMO2-203ENST00000411482 PGBD1Q96JS3 809 aa22.45■■□□□ 1.18
LMO2-203ENST00000411482 PPP1R9BQ96SB3 815 aa22.45■■□□□ 1.18
LMO2-203ENST00000411482 TSPY26PQ9H489 355 aa22.45■■□□□ 1.18
LMO2-203ENST00000411482 AATFQ9NY61 560 aaKnown RBP eCLIP22.45■■□□□ 1.18
LMO2-203ENST00000411482 ARPP21Q9UBL0 812 aaPredicted RBP22.45■■□□□ 1.18
LMO2-203ENST00000411482 ERICH2A1L162 156 aa22.44■■□□□ 1.18
LMO2-203ENST00000411482 USP17L12C9JPN9 530 aa22.44■■□□□ 1.18
LMO2-203ENST00000411482 USP17L21D6R901 530 aa22.44■■□□□ 1.18
LMO2-203ENST00000411482 ECE2O60344 883 aa22.44■■□□□ 1.18
LMO2-203ENST00000411482 LDHCP07864 332 aa22.44■■□□□ 1.18
LMO2-203ENST00000411482 SYNE3Q6ZMZ3 975 aa22.44■■□□□ 1.18
LMO2-203ENST00000411482 DZIP1Q86YF9 867 aaKnown RBP22.44■■□□□ 1.18
LMO2-203ENST00000411482 FAM163AQ96GL9 167 aaPredicted RBP22.44■■□□□ 1.18
LMO2-203ENST00000411482 BAZ2AQ9UIF9 1905 aaKnown RBP22.44■■□□□ 1.18
LMO2-203ENST00000411482 PSME4Q14997 1843 aa22.44■■□□□ 1.18
LMO2-203ENST00000411482 POTECB2RU33 542 aa22.43■■□□□ 1.18
LMO2-203ENST00000411482 RRP12Q5JTH9 1297 aaKnown RBP22.43■■□□□ 1.18
LMO2-203ENST00000411482 MICU3Q86XE3 530 aa22.43■■□□□ 1.18
LMO2-203ENST00000411482 RAB11FIP4Q86YS3 637 aa22.43■■□□□ 1.18
LMO2-203ENST00000411482 RTEL1Q9NZ71 1219 aa22.43■■□□□ 1.18
LMO2-203ENST00000411482 FAM205AQ6ZU69 1335 aa22.43■■□□□ 1.18
LMO2-203ENST00000411482 ZNF646O15015 1829 aaPredicted RBP22.43■■□□□ 1.18
LMO2-203ENST00000411482 CCDC196A0A1B0GTZ2 297 aa22.42■■□□□ 1.18
LMO2-203ENST00000411482 RANBP6O60518 1105 aaKnown RBP22.42■■□□□ 1.18
LMO2-203ENST00000411482 FMNL1O95466 1100 aaPredicted RBP22.42■■□□□ 1.18
LMO2-203ENST00000411482 UBAC1Q9BSL1 405 aa22.42■■□□□ 1.18
LMO2-203ENST00000411482 FUCA2Q9BTY2 467 aa22.42■■□□□ 1.18
LMO2-203ENST00000411482 EIF6P56537 245 aaKnown RBP22.41■■□□□ 1.18
LMO2-203ENST00000411482 KIF23Q02241 960 aaPredicted RBP22.41■■□□□ 1.18
LMO2-203ENST00000411482 DPY19L2Q6NUT2 758 aa22.41■■□□□ 1.18
LMO2-203ENST00000411482 ZNF526Q8TF50 670 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms